Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62029155 Chenopodium quinoa HOM05D001145 ORTHO05D001415 3.6e-99 364.8 168 100.0
AUR62029149 Chenopodium quinoa HOM05D001145 ORTHO05D001415 1.6e-78 296.2 192 76.0
AUR62014978 Chenopodium quinoa HOM05D001145 ORTHO05D001415 2.1e-75 285.8 192 74.0
Ah.01g014130 Amaranthus hybridus HOM05D001145 ORTHO05D001415 3.2e-71 271.9 192 68.8
EL10Ac9g22627 Beta vulgaris HOM05D001145 ORTHO05D001415 1.3e-69 266.5 192 67.2
PGR102G3025 Punica granatum HOM05D001145 ORTHO05D001415 1.1e-66 256.9 192 64.6
Sc21g0000340 Simmondsia chinensis HOM05D001145 ORTHO05D001415 1.8e-66 256.1 211 59.2
Prupe.6G113600 Prunus persica HOM05D001145 ORTHO05D001415 5.3e-66 254.6 211 59.2
Gohir.D07G109100 Gossypium hirsutum HOM05D001145 ORTHO05D001415 1.2e-65 253.4 211 60.2
Gorai.001G117200 Gossypium raimondii HOM05D001145 ORTHO05D001415 1.2e-65 253.4 211 60.2
Eucgr.B03924 Eucalyptus grandis HOM05D001145 ORTHO05D001415 1.5e-65 253.1 192 63.0
Gohir.A07G105000 Gossypium hirsutum HOM05D001145 ORTHO05D001415 2.6e-65 252.3 211 60.2
CiPaw.14G107000 Carya illinoinensis HOM05D001145 ORTHO05D001415 4.5e-65 251.5 192 65.1
Ciclev10028147m.g Citrus clementina HOM05D001145 ORTHO05D001415 1.3e-64 250.0 211 58.8
COL.COLO4_19206 Corchorus olitorius HOM05D001145 ORTHO05D001415 1.7e-64 249.6 192 63.5
CSS0024763 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D001415 5.0e-64 248.1 211 59.2
MD11G1149200 Malus domestica HOM05D001145 ORTHO05D001415 5.0e-64 248.1 192 62.0
QL01p014896 Quercus lobata HOM05D001145 ORTHO05D001415 5.0e-64 248.1 211 58.8
Cpa.g.sc47.4 Carica papaya HOM05D001145 ORTHO05D001415 6.5e-64 247.7 195 61.0
CSS0032816 Camellia sinensis var. sinensis HOM05D001145 ORTHO05D001415 1.4e-63 246.5 192 63.5
CANSAT64G1016 Cannabis sativa HOM05D001145 ORTHO05D001415 1.9e-63 246.1 192 60.9
Cfa010142 Carpinus fangiana HOM05D001145 ORTHO05D001415 2.5e-63 245.7 192 62.5
CiPaw.13G144900 Carya illinoinensis HOM05D001145 ORTHO05D001415 2.5e-63 245.7 192 63.0
Manes.04G012500 Manihot esculenta HOM05D001145 ORTHO05D001415 2.5e-63 245.7 192 61.5
Nitab4.5_0000173g0160 Nicotiana tabacum HOM05D001145 ORTHO05D001415 2.5e-63 245.7 212 56.6
FvH4_3g30560 Fragaria vesca HOM05D001145 ORTHO05D001415 3.2e-63 245.4 192 60.9
FAN11G1509 Fragaria x ananassa HOM05D001145 ORTHO05D001415 3.2e-63 245.4 192 60.9
FAN21G3468 Fragaria x ananassa HOM05D001145 ORTHO05D001415 3.2e-63 245.4 192 60.9
GSVIVG01031457001 Vitis vinifera HOM05D001145 ORTHO05D001415 3.2e-63 245.4 192 63.5
Actinidia24152 Actinidia chinensis HOM05D001145 ORTHO05D001415 7.2e-63 244.2 211 58.3
THA.LOC104810883 Tarenaya hassleriana HOM05D001145 ORTHO05D001415 7.2e-63 244.2 212 57.5
arahy.Tifrunner.gnm1.ann1.4585DL Arachis hypogaea HOM05D001145 ORTHO05D001415 9.3e-63 243.8 192 62.0
arahy.Tifrunner.gnm1.ann1.H5NNU3 Arachis hypogaea HOM05D001145 ORTHO05D001415 9.3e-63 243.8 192 62.0
Cc01_g10220 Coffea canephora HOM05D001145 ORTHO05D001415 9.3e-63 243.8 192 62.5
MSTRG.21084 Avicennia marina HOM05D001145 ORTHO05D001415 1.2e-62 243.4 211 56.9
Hma1.2p1_0772F.1_g215990 Hydrangea macrophylla HOM05D001145 ORTHO05D001415 1.2e-62 243.4 211 57.3
Hma1.2p1_0772F.1_g216000 Hydrangea macrophylla HOM05D001145 ORTHO05D001415 1.2e-62 243.4 211 57.3
Peaxi162Scf00983g00004 Petunia axillaris HOM05D001145 ORTHO05D001415 1.2e-62 243.4 212 55.7
Rhsim13G0101100 Rhododendron simsii HOM05D001145 ORTHO05D001415 1.2e-62 243.4 220 57.7
RcHm_v2.0_Chr5g0056561 Rosa chinensis HOM05D001145 ORTHO05D001415 1.2e-62 243.4 192 60.4
unitig_0.g1496 Utricularia gibba HOM05D001145 ORTHO05D001415 1.2e-62 243.4 192 60.4
Duzib150G0831 Durio zibethinus HOM05D001145 ORTHO05D001415 1.6e-62 243.0 211 56.9
CAN.G546.53 Capsicum annuum HOM05D001145 ORTHO05D001415 3.5e-62 241.9 212 56.1
Solyc11g066440.2 Solanum lycopersicum HOM05D001145 ORTHO05D001415 3.5e-62 241.9 212 55.7
Sopen11g026190 Solanum pennellii HOM05D001145 ORTHO05D001415 3.5e-62 241.9 212 55.7
Aa31LG4G14210 Aethionema arabicum HOM05D001145 ORTHO05D001415 7.9e-62 240.7 212 57.1
TWI75G1305 Tripterygium wilfordii HOM05D001145 ORTHO05D001415 1.0e-61 240.4 192 60.4
DCAR_022680 Daucus carota HOM05D001145 ORTHO05D001415 1.3e-61 240.0 211 57.8
Dinv16229 Davidia involucrata HOM05D001145 ORTHO05D001415 1.3e-61 240.0 192 61.5
Atru.chr3.3503 Acer truncatum HOM05D001145 ORTHO05D001415 2.3e-61 239.2 192 60.9
Lj1C213G3 Lonicera japonica HOM05D001145 ORTHO05D001415 3.0e-61 238.8 192 60.4
SalBow6G5394 Salvia bowleyana HOM05D001145 ORTHO05D001415 3.0e-61 238.8 192 60.4
PGSC0003DMG400000457 Solanum tuberosum HOM05D001145 ORTHO05D001415 3.9e-61 238.4 212 55.2
CsaV3_1G014120 Cucumis sativus L. HOM05D001145 ORTHO05D001415 6.7e-61 237.7 192 60.4
HanXRQChr11g0346011 Helianthus annuus HOM05D001145 ORTHO05D001415 6.7e-61 237.7 193 60.6
Thecc.09G298000 Theobroma cacao HOM05D001145 ORTHO05D001415 6.7e-61 237.7 211 56.9
Nn2g13867 Nelumbo nucifera HOM05D001145 ORTHO05D001415 1.5e-60 236.5 192 59.4
Phvul.011G086700 Phaseolus vulgaris HOM05D001145 ORTHO05D001415 1.5e-60 236.5 192 60.4
SGA_v2.0_scaffold27G11573 Striga asiatica HOM05D001145 ORTHO05D001415 1.5e-60 236.5 192 60.9
HPP92_008396 Vanilla planifolia HOM05D001145 ORTHO05D001415 1.5e-60 236.5 211 56.9
CARHR151160 Cardamine hirsuta HOM05D001145 ORTHO05D001415 1.9e-60 236.1 213 56.8
TAR633G2303 Trochodendron aralioides HOM05D001145 ORTHO05D001415 1.9e-60 236.1 193 60.1
AL5G23340 Arabidopsis lyrata HOM05D001145 ORTHO05D001415 2.5e-60 235.7 213 56.8
ECA248G1672 Erigeron canadensis HOM05D001145 ORTHO05D001415 2.5e-60 235.7 192 59.9
Migut.D02297 Erythranthe guttata HOM05D001145 ORTHO05D001415 3.3e-60 235.3 192 59.4
vmacro03252 Vaccinium macrocarpon HOM05D001145 ORTHO05D001415 3.3e-60 235.3 211 58.8
Lalb_Chr01g0004621 Lupinus albus HOM05D001145 ORTHO05D001415 4.3e-60 235.0 192 62.5
Sed0024158 Sechium edule HOM05D001145 ORTHO05D001415 4.3e-60 235.0 192 59.9
AT3G44880 Arabidopsis thaliana HOM05D001145 ORTHO05D001415 5.7e-60 234.6 213 56.3
Carub.0005s1062 Capsella rubella HOM05D001145 ORTHO05D001415 7.4e-60 234.2 213 56.8
MELO3C004867.2 Cucumis melo HOM05D001145 ORTHO05D001415 7.4e-60 234.2 192 60.4
Glyma.11G192300 Glycine max HOM05D001145 ORTHO05D001415 7.4e-60 234.2 192 60.4
Lj3g0004371 Lotus japonicus HOM05D001145 ORTHO05D001415 7.4e-60 234.2 211 55.9
Thhalv10002475m.g Eutrema salsugineum HOM05D001145 ORTHO05D001415 9.7e-60 233.8 213 55.9
Nitab4.5_0009628g0010 Nicotiana tabacum HOM05D001145 ORTHO05D001415 9.7e-60 233.8 193 57.5
Glyma.12G082100 Glycine max HOM05D001145 ORTHO05D001415 1.6e-59 233.0 192 59.9
Medtr4g057200 Medicago truncatula HOM05D001145 ORTHO05D001415 2.2e-59 232.6 192 58.9
A01p26740 Brassica napus HOM05D001145 ORTHO05D001415 4.8e-59 231.5 213 55.9
BraA01t02603Z Brassica rapa HOM05D001145 ORTHO05D001415 4.8e-59 231.5 213 55.9
Sp5g16340 Schrenkiella parvula HOM05D001145 ORTHO05D001415 4.8e-59 231.5 213 55.9
BcaB05g23052 Brassica carinata HOM05D001145 ORTHO05D001415 6.3e-59 231.1 213 55.9
Lj2A1005T32 Lonicera japonica HOM05D001145 ORTHO05D001415 6.3e-59 231.1 212 55.2
BcaC09g49659 Brassica carinata HOM05D001145 ORTHO05D001415 1.1e-58 230.3 213 55.4
C01p34130 Brassica napus HOM05D001145 ORTHO05D001415 1.1e-58 230.3 213 55.4
BolC1t03382H Brassica oleracea HOM05D001145 ORTHO05D001415 1.1e-58 230.3 213 55.4
Potri.004G217200 Populus trichocarpa HOM05D001145 ORTHO05D001415 1.1e-58 230.3 192 58.9
VMungo1127G2205 Vigna mungo HOM05D001145 ORTHO05D001415 1.1e-58 230.3 192 57.8
unitig_747.g21970 Utricularia gibba HOM05D001145 ORTHO05D001415 1.8e-58 229.6 204 55.9
ClCG01G013870 Citrullus lanatus HOM05D001145 ORTHO05D001415 4.1e-58 228.4 193 57.5
PSO339G1579 Papaver somniferum HOM05D001145 ORTHO05D001415 4.1e-58 228.4 212 55.7
Aqoxy2G01627 Aquilegia oxysepala HOM05D001145 ORTHO05D001415 5.3e-58 228.0 193 58.5
Lsat_1_v5_gn_1_64901 Lactuca sativa HOM05D001145 ORTHO05D001415 5.3e-58 228.0 192 59.4
CDE07G1511 Ceratophyllum demersum HOM05D001145 ORTHO05D001415 9.0e-58 227.3 209 53.6
Ca_19325_v3 Cicer arietinum L. HOM05D001145 ORTHO05D001415 2.0e-57 226.1 192 58.3
PSO801G0093 Papaver somniferum HOM05D001145 ORTHO05D001415 2.0e-57 226.1 212 55.2
ATR0043G010 Amborella trichopoda HOM05D001145 ORTHO05D001415 4.5e-57 224.9 211 54.0
Psat7g223720 Pisum sativum HOM05D001145 ORTHO05D001415 4.5e-57 224.9 192 57.8
TPR.G36804 Trifolium pratense HOM05D001145 ORTHO05D001415 2.2e-56 222.6 192 57.3
SEGI_32230 Sequoiadendron giganteum HOM05D001145 ORTHO05D001415 1.4e-55 219.9 212 52.8
Os03g0146400 Oryza sativa ssp. japonica HOM05D001145 ORTHO05D001415 3.2e-55 218.8 211 52.1
Haze_23528 Corylus avellana HOM05D001145 ORTHO05D001415 1.6e-54 216.5 179 59.8
Pp3c1_40790 Physcomitrium patens HOM05D001145 ORTHO05D001415 2.7e-54 215.7 215 54.4
Zm00001eb003760 Zea mays HOM05D001145 ORTHO05D001415 6.1e-54 214.5 211 51.7
AagrBONN_evm.TU.Sc2ySwM_228.4808 Anthoceros agrestis HOM05D001145 ORTHO05D001415 1.4e-53 213.4 207 53.6
Sabra04G0147900 Salix brachista HOM05D001145 ORTHO05D001415 5.1e-53 211.5 250 45.6
SMO139G0147 Selaginella moellendorffii HOM05D001145 ORTHO05D001415 4.3e-52 208.4 220 50.0
Pp3c3_19130 Physcomitrium patens HOM05D001145 ORTHO05D001415 2.4e-50 202.6 207 51.2
Mapoly0046s0012 Marchantia polymorpha HOM05D001145 ORTHO05D001415 2.0e-49 199.5 194 53.1
Cfa010140 Carpinus fangiana HOM05D001145 ORTHO05D001415 1.9e-47 193.0 177 56.5
Potri.009G004100 Populus trichocarpa HOM05D001145 ORTHO05D001415 3.2e-39 165.6 162 52.5
Duzib150G0254 Durio zibethinus HOM05D001145 ORTHO05D001415 9.4e-39 164.1 112 67.9
Haze_23533 Corylus avellana HOM05D001145 ORTHO05D001415 9.7e-36 154.1 93 76.3
FAN25G1127 Fragaria x ananassa HOM05D001145 ORTHO05D001415 2.4e-26 122.9 75 76.0
Lsat_1_v5_gn_1_64861 Lactuca sativa HOM05D001145 ORTHO05D001415 7.0e-26 121.3 93 65.6
Haze_11468 Corylus avellana HOM05D001145 ORTHO05D001415 1.5e-23 113.6 70 75.7
Oeu034670.1 Olea europaea HOM05D001145 ORTHO05D001415 8.0e-22 107.8 56 80.4
arahy.Tifrunner.gnm1.ann1.GG70IM Arachis hypogaea HOM05D001145 ORTHO05D082386 3.6e-14 82.4 43 76.7
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-12 77.4 49 63.3
Gorai.004G016200 Gossypium raimondii HOM05D001145 ORTHO05D001415 6.4e-11 71.6 172 29.1
CANSAT11G1975 Cannabis sativa HOM05D001145 ORTHO05D001415 1.8e-10 70.1 171 27.5
Gohir.D08G021250 Gossypium hirsutum HOM05D001145 ORTHO05D001415 1.6e-09 67.0 144 30.6
arahy.Tifrunner.gnm1.ann1.CUHC67 Arachis hypogaea HOM05D000795 ORTHO05D012122 5.9e-09 65.1 37 70.3
Mapoly0028s0113 Marchantia polymorpha HOM05D001145 ORTHO05D001415 8.6e-08 61.2 91 36.3
arahy.Tifrunner.gnm1.ann1.3KX6TS Arachis hypogaea HOM05D001145 ORTHO05D038926 1.1e-07 60.8 34 61.8
Sabra09G0001800 Salix brachista HOM05D001145 ORTHO05D038926 1.1e-07 60.8 31 77.4
CANSAT11G2536 Cannabis sativa HOM05D001145 ORTHO05D001415 1.5e-07 60.5 77 40.3
Lj6g0004877 Lotus japonicus HOM05D001145 ORTHO05D001415 1.9e-07 60.1 111 30.6
ATR0043G038 Amborella trichopoda HOM05D001145 ORTHO05D001415 3.3e-07 59.3 33 78.8
COL.COLO4_35035 Corchorus olitorius HOM05D001145 ORTHO05D001415 3.3e-07 59.3 79 36.7
CsaV3_1G014100 Cucumis sativus L. HOM05D001145 ORTHO05D001415 3.3e-07 59.3 24 100.0
Lj4g0015134 Lotus japonicus HOM05D001145 ORTHO05D001415 5.6e-07 58.5 111 30.6
Aqoxy2G00543_Aqoxy2G00544 Aquilegia oxysepala HOM05D001145 ORTHO05D001415 7.3e-07 58.2 95 35.8
TPR.G24382 Trifolium pratense HOM05D001145 ORTHO05D001415 7.3e-07 58.2 77 37.7
CANSAT11G1678 Cannabis sativa HOM05D001145 ORTHO05D001415 9.5e-07 57.8 77 32.5
CsaV3_1G041790 Cucumis sativus L. HOM05D001145 ORTHO05D001415 9.5e-07 57.8 86 32.6
Hund07589 Selenicereus undatus HOM05D001145 ORTHO05D001415 9.5e-07 57.8 88 31.8
AagrBONN_evm.TU.Sc2ySwM_228.4031 Anthoceros agrestis HOM05D001145 ORTHO05D001415 1.2e-06 57.4 216 22.2
QL01p008665 Quercus lobata HOM05D001145 ORTHO05D001415 1.2e-06 57.4 77 40.3
COL.COLO4_18919 Corchorus olitorius HOM05D001145 ORTHO05D001415 1.6e-06 57.0 86 32.6
MELO3C015593.2 Cucumis melo HOM05D001145 ORTHO05D001415 1.6e-06 57.0 87 33.3
HanXRQChr14g0437831 Helianthus annuus HOM05D001145 ORTHO05D001415 1.6e-06 57.0 86 31.4
Glyma.08G114400 Glycine max HOM05D001145 ORTHO05D001415 2.1e-06 56.6 111 29.7
MD11G1008100 Malus domestica HOM05D001145 ORTHO05D001415 2.1e-06 56.6 77 36.4
MD11G1008200 Malus domestica HOM05D001145 ORTHO05D001415 2.1e-06 56.6 77 37.7
CiPaw.14G135500 Carya illinoinensis HOM05D001145 ORTHO05D001415 2.8e-06 56.2 111 31.5
MELO3C015592.2 Cucumis melo HOM05D001145 ORTHO05D001415 2.8e-06 56.2 77 37.7
MD03G1005500 Malus domestica HOM05D001145 ORTHO05D001415 2.8e-06 56.2 77 36.4
TWI60G0221 Tripterygium wilfordii HOM05D001145 ORTHO05D001415 2.8e-06 56.2 111 31.5
ClCG03G014440 Citrullus lanatus HOM05D001145 ORTHO05D001415 3.6e-06 55.8 77 36.4
FAN06G4677 Fragaria x ananassa HOM05D001145 ORTHO05D001415 3.6e-06 55.8 106 28.3
Lj2C729T4 Lonicera japonica HOM05D001145 ORTHO05D001415 3.6e-06 55.8 75 36.0
Medtr8g085840 Medicago truncatula HOM05D001145 ORTHO05D001415 3.6e-06 55.8 77 36.4
TWI60G0780 Tripterygium wilfordii HOM05D001145 ORTHO05D001415 3.6e-06 55.8 111 31.5
Potri.003G219400 Populus trichocarpa HOM05D001145 ORTHO05D001415 4.7e-06 55.5 78 35.9
PGR119G0075 Punica granatum HOM05D001145 ORTHO05D001415 4.7e-06 55.5 111 30.6
VMungo0251G0475 Vigna mungo HOM05D001145 ORTHO05D001415 4.7e-06 55.5 111 30.6
GSVIVG01025444001 Vitis vinifera HOM05D001145 ORTHO05D001415 4.7e-06 55.5 111 27.9
CANSAT11G0354 Cannabis sativa HOM05D001145 ORTHO05D001415 6.2e-06 55.1 77 37.7
Ciclev10014836m.g Citrus clementina HOM05D001145 ORTHO05D001415 6.2e-06 55.1 106 30.2
PSO384G3103 Papaver somniferum HOM05D001145 ORTHO05D001415 6.2e-06 55.1 78 38.5
RcHm_v2.0_Chr5g0083181 Rosa chinensis HOM05D001145 ORTHO05D001415 6.2e-06 55.1 111 29.7
Hund07585 Selenicereus undatus HOM05D001145 ORTHO05D001415 6.2e-06 55.1 87 32.2
Aqoxy2G00546 Aquilegia oxysepala HOM05D001145 ORTHO05D001415 8.0e-06 54.7 106 32.1
arahy.Tifrunner.gnm1.ann1.KD1GVP Arachis hypogaea HOM05D001145 ORTHO05D001415 8.0e-06 54.7 77 35.1
Cfa009573 Carpinus fangiana HOM05D001145 ORTHO05D001415 8.0e-06 54.7 111 30.6
HanXRQChr14g0435021 Helianthus annuus HOM05D001145 ORTHO05D001415 8.0e-06 54.7 96 30.2
Mapoly0037s0111 Marchantia polymorpha HOM05D001145 ORTHO05D001415 8.0e-06 54.7 107 31.8
Psat7g072080 Pisum sativum HOM05D001145 ORTHO05D001415 8.0e-06 54.7 77 35.1
TWI60G1063 Tripterygium wilfordii HOM05D001145 ORTHO05D001415 8.0e-06 54.7 111 30.6


User provided reference genes

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