Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028984 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1989.5 1043 100.0
EL10Ac8g19107 Beta vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1719.5 1205 77.6
Ah.14g084990 Amaranthus hybridus HOM05D003881 ORTHO05D004343 0.0e+00 1696.4 1087 82.1
AUR62025189 Chenopodium quinoa HOM05D003881 ORTHO05D004343 0.0e+00 1679.8 926 95.2
Hund26018 Selenicereus undatus HOM05D003881 ORTHO05D004343 0.0e+00 1647.9 1090 79.6
Sc14g0000600 Simmondsia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1513.4 1077 75.1
Nn8g38678 Nelumbo nucifera HOM05D003881 ORTHO05D004343 0.0e+00 1431.8 1092 68.4
CSS0040077 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 0.0e+00 1429.5 1098 68.8
TAR383G1047 Trochodendron aralioides HOM05D003881 ORTHO05D004343 0.0e+00 1426.4 1095 69.0
Rhsim03G0228800 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1398.3 1089 67.5
GSVIVG01015096001 Vitis vinifera HOM05D003881 ORTHO05D004343 0.0e+00 1396.7 1089 67.7
Lj6g0005202 Lotus japonicus HOM05D003881 ORTHO05D004343 0.0e+00 1395.2 1089 69.4
Ca_26333_v3 Cicer arietinum L. HOM05D003881 ORTHO05D004343 0.0e+00 1385.5 1089 67.5
CsaV3_1G040850 Cucumis sativus L. HOM05D003881 ORTHO05D004343 0.0e+00 1381.3 1067 68.0
Lalb_Chr11g0074291 Lupinus albus HOM05D003881 ORTHO05D004343 0.0e+00 1379.4 1091 68.3
MELO3C015512.2 Cucumis melo HOM05D003881 ORTHO05D004343 0.0e+00 1378.6 1067 67.9
Prupe.7G201100 Prunus persica HOM05D003881 ORTHO05D004343 0.0e+00 1378.6 1097 66.4
Sed0009854 Sechium edule HOM05D003881 ORTHO05D004343 0.0e+00 1378.6 1067 69.3
arahy.Tifrunner.gnm1.ann1.13CNWC Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1378.2 1090 68.4
Glyma.09G068600 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1377.8 1091 68.8
Rhsim01G0044500 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1377.8 1115 65.8
arahy.Tifrunner.gnm1.ann1.3W29E4 Arachis hypogaea HOM05D003881 ORTHO05D004343 0.0e+00 1376.7 1106 67.7
MBI19_g11836_MAGBIO Magnolia biondii HOM05D003881 ORTHO05D004343 0.0e+00 1376.3 1090 67.2
Aqoxy5G02361 Aquilegia oxysepala HOM05D003881 ORTHO05D004343 0.0e+00 1375.5 1089 67.2
Dinv42377 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1375.1 1096 67.2
HanXRQChr12g0354081 Helianthus annuus HOM05D003881 ORTHO05D004343 0.0e+00 1374.8 1069 67.9
CiPaw.03G207700 Carya illinoinensis HOM05D003881 ORTHO05D004343 0.0e+00 1372.1 1092 67.9
Psat1g133400 Pisum sativum HOM05D003881 ORTHO05D004343 0.0e+00 1371.3 1090 67.4
COL.COLO4_18111 Corchorus olitorius HOM05D003881 ORTHO05D004343 0.0e+00 1370.1 1097 66.8
CANSAT56G1084 Cannabis sativa HOM05D003881 ORTHO05D004343 0.0e+00 1369.8 1060 67.3
CAN.G457.4 Capsicum annuum HOM05D003881 ORTHO05D004343 0.0e+00 1369.8 1102 65.8
Ciclev10007295m.g Citrus clementina HOM05D003881 ORTHO05D004343 0.0e+00 1368.6 1094 67.1
TWI34G0082 Tripterygium wilfordii HOM05D003881 ORTHO05D004343 0.0e+00 1356.7 1054 66.7
Atru.chr7.1693 Acer truncatum HOM05D003881 ORTHO05D004343 0.0e+00 1353.2 1099 66.2
Medtr2g041420 Medicago truncatula HOM05D003881 ORTHO05D004343 0.0e+00 1352.0 1090 65.9
Eucgr.C00824 Eucalyptus grandis HOM05D003881 ORTHO05D004343 0.0e+00 1351.7 1094 67.1
Dinv25567 Davidia involucrata HOM05D003881 ORTHO05D004343 0.0e+00 1349.3 1069 66.0
Gorai.001G015300 Gossypium raimondii HOM05D003881 ORTHO05D004343 0.0e+00 1348.6 870 75.7
Gohir.A07G014800 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1348.2 870 75.6
Phvul.009G228100 Phaseolus vulgaris HOM05D003881 ORTHO05D004343 0.0e+00 1348.2 1054 68.2
Potri.006G143300 Populus trichocarpa HOM05D003881 ORTHO05D004343 0.0e+00 1347.8 1090 65.2
Gohir.D07G014500 Gossypium hirsutum HOM05D003881 ORTHO05D004343 0.0e+00 1347.0 870 75.6
Thecc.09G079000 Theobroma cacao HOM05D003881 ORTHO05D004343 0.0e+00 1344.3 868 76.3
ECA232G2980 Erigeron canadensis HOM05D003881 ORTHO05D004343 0.0e+00 1339.7 1069 65.0
Sabra06G0112200 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1337.4 1092 64.7
Sabra06G0113500 Salix brachista HOM05D003881 ORTHO05D004343 0.0e+00 1337.4 1092 64.7
PSO724G0120 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1337.0 1045 69.0
FAN26G0375 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1336.6 1090 65.3
PSO135G0960 Papaver somniferum HOM05D003881 ORTHO05D004343 0.0e+00 1335.9 1039 68.9
CDE06G1176 Ceratophyllum demersum HOM05D003881 ORTHO05D004343 0.0e+00 1335.5 1079 67.5
ClCG03G015190 Citrullus lanatus HOM05D003881 ORTHO05D004343 0.0e+00 1334.3 1058 66.9
FAN19G1850 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1333.2 1034 67.2
Glyma.15G176400 Glycine max HOM05D003881 ORTHO05D004343 0.0e+00 1325.5 1090 65.5
PGR142G3183 Punica granatum HOM05D003881 ORTHO05D004343 0.0e+00 1325.5 1093 66.9
THA.LOC104815327 Tarenaya hassleriana HOM05D003881 ORTHO05D004343 0.0e+00 1323.5 894 73.2
MSTRG.26461 Avicennia marina HOM05D003881 ORTHO05D004343 0.0e+00 1320.1 1071 65.1
Actinidia29923 Actinidia chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1318.5 1092 65.4
Cfa003017 Carpinus fangiana HOM05D003881 ORTHO05D004343 0.0e+00 1318.1 1095 65.4
FvH4_1g08430 Fragaria vesca HOM05D003881 ORTHO05D004343 0.0e+00 1318.1 1034 66.4
FAN26G1433 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1315.4 1130 62.9
Rhsim01G0044300 Rhododendron simsii HOM05D003881 ORTHO05D004343 0.0e+00 1313.5 1095 64.5
Carub.0003s2725 Capsella rubella HOM05D003881 ORTHO05D004343 0.0e+00 1311.6 894 72.5
FAN28G2111 Fragaria x ananassa HOM05D003881 ORTHO05D004343 0.0e+00 1310.8 1080 64.2
Lj7A685T51 Lonicera japonica HOM05D003881 ORTHO05D004343 0.0e+00 1310.8 929 70.9
DCAR_031930 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1309.7 1081 64.2
AL3G43760 Arabidopsis lyrata HOM05D003881 ORTHO05D004343 0.0e+00 1305.4 1094 64.2
Lsat_1_v5_gn_5_141221 Lactuca sativa HOM05D003881 ORTHO05D004343 0.0e+00 1303.5 1091 63.1
Manes.16G096500 Manihot esculenta HOM05D003881 ORTHO05D004343 0.0e+00 1301.2 1098 63.5
Sp3g24670 Schrenkiella parvula HOM05D003881 ORTHO05D004343 0.0e+00 1298.5 895 71.6
Aa31sc133G100 Aethionema arabicum HOM05D003881 ORTHO05D004343 0.0e+00 1294.3 927 70.1
Thhalv10002377m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 0.0e+00 1294.3 1075 64.0
MD02G1088500 Malus domestica HOM05D003881 ORTHO05D004343 0.0e+00 1291.6 1092 62.6
BcaB08g34515 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1290.0 895 71.3
Haze_25994 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1290.0 1124 63.8
Duzib168G2095 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1289.6 870 73.4
TPR.G28668 Trifolium pratense HOM05D003881 ORTHO05D004343 0.0e+00 1283.5 1049 64.4
ATR0598G033 Amborella trichopoda HOM05D003881 ORTHO05D004343 0.0e+00 1280.0 1079 63.8
RcHm_v2.0_Chr2g0094531 Rosa chinensis HOM05D003881 ORTHO05D004343 0.0e+00 1279.6 1093 62.9
Nitab4.5_0000343g0070 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1272.7 1109 64.0
C03p55630 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1269.2 896 70.6
BolC3t17840H Brassica oleracea HOM05D003881 ORTHO05D004343 0.0e+00 1269.2 896 70.6
A03p44780 Brassica napus HOM05D003881 ORTHO05D004343 0.0e+00 1268.1 896 70.5
BraA03t13613Z Brassica rapa HOM05D003881 ORTHO05D004343 0.0e+00 1268.1 896 70.5
SEGI_24391 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 0.0e+00 1260.0 1036 63.1
Migut.L01552 Erythranthe guttata HOM05D003881 ORTHO05D004343 0.0e+00 1258.8 1113 61.5
BcaC01g03143 Brassica carinata HOM05D003881 ORTHO05D004343 0.0e+00 1258.0 898 69.9
QL11p000475 Quercus lobata HOM05D003881 ORTHO05D004343 0.0e+00 1256.9 1203 59.6
SGA_v2.0_scaffold21G09481 Striga asiatica HOM05D003881 ORTHO05D004343 0.0e+00 1256.9 1101 63.1
Haze_25986 Corylus avellana HOM05D003881 ORTHO05D004343 0.0e+00 1249.2 1124 62.5
Oeu018066.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1233.4 961 65.6
Cc06_g12030 Coffea canephora HOM05D003881 ORTHO05D004343 0.0e+00 1229.5 1102 62.0
Duzib150G0508 Durio zibethinus HOM05D003881 ORTHO05D004343 0.0e+00 1223.8 1099 62.6
vmacro06329 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 0.0e+00 1197.2 900 67.7
Nitab4.5_0001488g0030 Nicotiana tabacum HOM05D003881 ORTHO05D004343 0.0e+00 1187.9 1058 61.8
DCAR_024741 Daucus carota HOM05D003881 ORTHO05D004343 0.0e+00 1185.2 1225 54.7
SalBow4G1287 Salvia bowleyana HOM05D003881 ORTHO05D004343 0.0e+00 1176.0 1090 60.4
Oeu041279.1 Olea europaea HOM05D003881 ORTHO05D004343 0.0e+00 1170.6 1040 58.2
Zm00001eb073540 Zea mays HOM05D003881 ORTHO05D004343 0.0e+00 1122.5 1057 56.3
Mapoly0010s0036 Marchantia polymorpha HOM05D003881 ORTHO05D004343 0.0e+00 1111.3 881 62.1
SMO143G0189 Selaginella moellendorffii HOM05D003881 ORTHO05D004343 0.0e+00 1100.9 893 60.6
AagrBONN_evm.TU.Sc2ySwM_344.1648 Anthoceros agrestis HOM05D003881 ORTHO05D004343 2.3e-300 1035.8 872 59.1
Solyc07g041510.3 Solanum lycopersicum HOM05D003881 ORTHO05D004343 3.2e-294 1015.4 693 72.9
Sopen07g027960 Solanum pennellii HOM05D003674 ORTHO05D004343 4.2e-294 1015.0 690 73.0
unitig_8.g3529 Utricularia gibba HOM05D003881 ORTHO05D004343 2.1e-282 976.1 1052 53.2
Pp3c3_17140 Physcomitrium patens HOM05D003881 ORTHO05D004343 3.8e-263 912.1 745 60.0
Cpa.g.sc28.63 Carica papaya HOM05D003881 ORTHO05D004343 1.1e-259 900.6 635 71.3
TAR383G0903 Trochodendron aralioides HOM05D003881 ORTHO05D004343 1.5e-259 900.2 546 80.4
Peaxi162Scf00127g00019 Petunia axillaris HOM05D003881 ORTHO05D004343 1.8e-252 876.7 690 65.7
CARHR103800 Cardamine hirsuta HOM05D003881 ORTHO05D004343 7.2e-222 775.0 576 66.7
HPP92_007226 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.6e-176 622.9 572 56.5
Os07g0476200 Oryza sativa ssp. japonica HOM05D003881 ORTHO05D004343 2.5e-158 563.9 396 70.2
CARHR103810 Cardamine hirsuta HOM05D003881 ORTHO05D004343 1.3e-146 525.0 318 80.2
TAR383G0300 Trochodendron aralioides HOM05D003881 ORTHO05D004343 2.5e-142 510.8 524 58.4
SEGI_36108 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.6e-123 448.4 450 55.1
CBR_g74629 Chara braunii HOM05D003881 ORTHO05D004343 1.2e-120 438.7 368 57.3
Sopen07g021070 Solanum pennellii HOM05D003881 ORTHO05D004343 1.2e-96 359.0 398 54.8
Peaxi162Scf00127g00018 Petunia axillaris HOM05D003881 ORTHO05D004343 6.4e-93 346.7 391 51.7
MCO14G023 Micromonas commoda HOM05D003881 ORTHO05D004343 1.3e-90 339.0 1042 28.2
SHI23794 Sapria himalayana HOM05D003881 ORTHO05D004343 2.3e-87 328.2 324 54.9
QL01p053501 Quercus lobata HOM05D003881 ORTHO05D004343 3.4e-86 324.3 233 67.4
QL03p010974 Quercus lobata HOM05D003881 ORTHO05D004343 8.3e-85 319.7 276 59.4
QL04p095684 Quercus lobata HOM05D003881 ORTHO05D004343 9.2e-84 316.2 233 65.7
Cre03.g189605 Chlamydomonas reinhardtii HOM05D003881 ORTHO05D004343 4.4e-78 297.4 1035 25.6
Psat4g185720 Pisum sativum HOM05D003881 ORTHO05D004343 1.2e-64 252.7 220 61.4
Zm00001eb329800 Zea mays HOM05D003881 ORTHO05D004343 3.4e-62 244.6 190 63.2
QL10p021459 Quercus lobata HOM05D000176 ORTHO05D000106 4.6e-59 234.2 187 65.2
AUR62025190 Chenopodium quinoa HOM05D003881 ORTHO05D004343 1.0e-50 206.5 110 96.4
SEGI_33062 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.3e-50 205.3 144 68.1
ATR0684G009 Amborella trichopoda HOM05D003881 ORTHO05D004343 5.8e-46 190.7 389 33.9
Thhalv10002929m.g Eutrema salsugineum HOM05D003881 ORTHO05D004343 1.0e-42 179.9 217 47.5
ATR0193G014 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.9e-41 175.6 101 84.2
CBR_g74627 Chara braunii HOM05D003881 ORTHO05D004343 1.5e-38 166.0 225 39.6
CSS0024068 Camellia sinensis var. sinensis HOM05D003881 ORTHO05D004343 2.6e-38 165.2 99 77.8
Lsat_1_v5_gn_3_15640 Lactuca sativa HOM05D003881 ORTHO05D004343 6.5e-37 160.6 103 72.8
ATR0193G031 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.1e-36 159.8 108 72.2
SEGI_35060 Sequoiadendron giganteum HOM05D000021 ORTHO05D000010 5.1e-34 151.0 121 62.0
SEGI_29160 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 4.3e-33 147.9 119 60.5
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 8.2e-32 143.7 165 46.7
HPP92_012481 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.1e-31 141.4 152 52.6
Actinidia38472 Actinidia chinensis HOM05D003881 ORTHO05D004343 1.7e-29 136.0 237 38.8
ATR0684G059 Amborella trichopoda HOM05D003881 ORTHO05D004343 1.7e-29 136.0 93 73.1
Hma1.2p1_0528F.1_g173040 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 6.1e-27 127.5 108 60.2
Hma1.2p1_0980F.1_g243635 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 6.1e-27 127.5 108 60.2
Hma1.2p1_1385F.1_g279633 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 6.1e-27 127.5 108 60.2
MD15G1215900 Malus domestica HOM05D003881 ORTHO05D004343 5.1e-26 124.4 241 35.7
Psat1g224080 Pisum sativum HOM05D003881 ORTHO05D004343 8.2e-24 117.1 84 65.5
Hma1.2p1_0508F.1_g168780 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 3.1e-23 115.2 70 72.9
Psat1g034120 Pisum sativum HOM05D003881 ORTHO05D004343 6.9e-23 114.0 86 68.6
Hma1.2p1_0430F.1_g151320 Hydrangea macrophylla HOM05D003881 ORTHO05D004343 2.9e-21 108.6 61 78.7
vmacro22673 Vaccinium macrocarpon HOM05D003881 ORTHO05D004343 9.4e-20 103.6 269 33.1
SEGI_26438 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.6e-19 101.7 59 79.7
Rhsim03G0229000 Rhododendron simsii HOM05D003881 ORTHO05D004343 4.6e-19 101.3 84 70.2
HPP92_006853 Vanilla planifolia HOM05D003881 ORTHO05D004343 4.6e-19 101.3 82 64.6
HPP92_006870 Vanilla planifolia HOM05D003881 ORTHO05D004343 1.8e-18 99.4 168 43.5
Psat0s7528g0040 Pisum sativum HOM05D003881 ORTHO05D004343 2.3e-18 99.0 151 42.4
SEGI_23032 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 2.3e-18 99.0 67 71.6
HPP92_028483 Vanilla planifolia HOM05D003881 ORTHO05D004343 5.1e-18 97.8 61 67.2
Psat1g059560 Pisum sativum HOM05D003881 ORTHO05D004343 8.8e-18 97.1 151 42.4
SEGI_15507 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.1e-15 90.1 79 55.7
TPR.G10985 Trifolium pratense HOM05D003881 ORTHO05D004343 3.1e-15 88.6 47 91.5
SEGI_39855 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 5.3e-15 87.8 72 63.9
RcHm_v2.0_Chr5g0007121 Rosa chinensis HOM05D003881 ORTHO05D004343 6.9e-15 87.4 51 78.4
Psat6g098400 Pisum sativum HOM05D003881 ORTHO05D004343 4.7e-11 74.7 63 57.1
SEGI_11752 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 1.8e-10 72.8 135 36.3
ATR0193G048 Amborella trichopoda HOM05D003881 ORTHO05D004343 8.8e-10 70.5 62 56.5
PGSC0003DMG400019565 Solanum tuberosum HOM05D003881 ORTHO05D004343 3.7e-08 65.1 87 51.7
HPP92_012555 Vanilla planifolia HOM05D003881 ORTHO05D004343 3.7e-08 65.1 165 33.9
BolC7t41346H Brassica oleracea HOM05D003881 ORTHO05D004343 6.3e-08 64.3 79 40.5
C07p09280 Brassica napus HOM05D003881 ORTHO05D004343 1.1e-07 63.5 79 40.5
CBR_g74625 Chara braunii HOM05D003881 ORTHO05D004343 7.0e-07 60.8 66 48.5
SEGI_25041 Sequoiadendron giganteum HOM05D003881 ORTHO05D004343 3.5e-06 58.5 76 40.8
Rhsim12G0000800 Rhododendron simsii HOM05D003469 ORTHO05D004084 7.7e-06 57.4 362 20.4


User provided reference genes

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