Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 2.1e-86 322.4 174 100.0
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 2.3e-80 302.4 172 94.2
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 3.5e-36 155.6 169 55.6
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 3.0e-24 115.9 161 45.3
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 8.9e-24 114.4 168 40.5
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 1.1e-21 107.5 166 42.2
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 3.1e-21 105.9 119 48.7
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 9.2e-21 104.4 143 46.9
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 1.2e-20 104.0 173 39.9
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 2.0e-20 103.2 169 41.4
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 3.5e-20 102.4 155 41.9
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 3.5e-20 102.4 141 45.4
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 5.9e-20 101.7 146 45.9
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 5.0e-19 98.6 128 47.7
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 5.0e-19 98.6 163 38.7
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 5.0e-19 98.6 162 40.1
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 6.6e-19 98.2 156 40.4
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 6.6e-19 98.2 156 40.4
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 8.6e-19 97.8 166 39.2
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 8.6e-19 97.8 138 42.8
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 8.6e-19 97.8 153 43.8
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 8.6e-19 97.8 177 41.2
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 1.5e-18 97.1 161 41.0
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 2.5e-18 96.3 172 38.4
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 4.3e-18 95.5 146 42.5
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 4.3e-18 95.5 162 38.3
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 2.1e-17 93.2 148 43.2
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 2.1e-17 93.2 142 47.2
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 3.6e-17 92.4 152 42.8
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 4.7e-17 92.0 159 39.0
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 8.0e-17 91.3 162 38.9
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 1.4e-16 90.5 170 40.0
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 2.3e-16 89.7 182 35.7
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 2.3e-16 89.7 158 39.2
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 3.0e-16 89.4 136 42.6
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 4.0e-16 89.0 165 40.0
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 5.2e-16 88.6 136 39.7
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 6.8e-16 88.2 149 40.9
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 8.9e-16 87.8 130 46.2
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 2.0e-15 86.7 169 37.9
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 2.0e-15 86.7 125 42.4
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 2.0e-15 86.7 164 38.4
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 2.6e-15 86.3 82 52.4
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 2.6e-15 86.3 173 35.3
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 2.6e-15 86.3 148 41.2
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.4e-15 85.9 129 45.0
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 4.4e-15 85.5 169 38.5
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 5.8e-15 85.1 172 36.6
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 5.8e-15 85.1 161 35.4
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 7.5e-15 84.7 173 34.7
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 7.5e-15 84.7 130 46.2
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 9.8e-15 84.3 160 38.1
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.3e-14 84.0 130 43.8
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 1.3e-14 84.0 155 38.1
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 1.7e-14 83.6 163 35.6
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 1.7e-14 83.6 170 37.6
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 1.7e-14 83.6 161 36.6
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 2.2e-14 83.2 130 41.5
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 2.2e-14 83.2 126 42.9
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 2.9e-14 82.8 170 38.8
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 2.9e-14 82.8 149 40.9
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 3.7e-14 82.4 168 33.3
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 4.9e-14 82.0 127 40.9
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 6.4e-14 81.6 155 37.4
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 8.3e-14 81.3 182 37.4
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 8.3e-14 81.3 126 42.1
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 1.1e-13 80.9 133 40.6
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 1.1e-13 80.9 125 41.6
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 2.4e-13 79.7 129 46.5
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 1.2e-12 77.4 120 40.0
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 1.6e-12 77.0 111 40.5
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 2.7e-12 76.3 105 39.0
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 2.7e-12 76.3 105 39.0
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 2.7e-12 76.3 129 34.1
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 3.5e-12 75.9 134 36.6
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 3.5e-12 75.9 127 40.9
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 4.6e-12 75.5 157 33.8
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 6.0e-12 75.1 112 43.8
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 6.0e-12 75.1 123 38.2
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 1.3e-11 73.9 124 38.7
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 1.3e-11 73.9 152 34.2
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 1.7e-11 73.6 129 35.7
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 2.3e-11 73.2 130 37.7
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 3.0e-11 72.8 128 38.3
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 3.9e-11 72.4 129 34.9
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 3.9e-11 72.4 157 33.1
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 5.0e-11 72.0 129 34.9
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 6.6e-11 71.6 144 38.9
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 8.6e-11 71.2 123 41.5
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 1.1e-10 70.9 156 32.1
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 1.1e-10 70.9 126 33.3
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 1.1e-10 70.9 108 43.5
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 1.9e-10 70.1 135 40.0
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 2.5e-10 69.7 128 34.4
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 4.3e-10 68.9 62 51.6
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 4.3e-10 68.9 123 37.4
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 7.3e-10 68.2 126 32.5
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 9.5e-10 67.8 126 32.5
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 1.6e-09 67.0 126 32.5
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 1.6e-09 67.0 126 32.5
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 3.6e-09 65.9 135 34.8
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 4.7e-09 65.5 96 37.5
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 4.7e-09 65.5 97 40.2
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 1.1e-08 64.3 58 48.3
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 1.4e-08 63.9 160 31.9
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 2.3e-08 63.2 169 32.5
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 3.1e-08 62.8 95 36.8
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 6.8e-08 61.6 119 37.8
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 1.5e-07 60.5 121 35.5
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 3.4e-07 59.3 137 33.6
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 1.3e-06 57.4 53 50.9


User provided reference genes

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