Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 1.9e-203 712.2 351 100.0
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 1.3e-159 566.6 347 81.6
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 1.8e-156 556.2 347 79.5
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 4.1e-153 545.0 347 78.7
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 1.2e-139 500.4 342 73.4
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 2.9e-135 485.7 239 99.2
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 1.8e-132 476.5 348 70.1
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 8.9e-132 474.2 342 70.2
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 8.9e-132 474.2 352 69.3
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 1.3e-130 470.3 357 69.5
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 9.2e-129 464.2 347 67.7
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 4.6e-128 461.8 356 67.1
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 1.3e-127 460.3 347 67.7
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 3.9e-127 458.8 348 69.5
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 5.0e-127 458.4 355 67.3
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 8.6e-127 457.6 347 67.4
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 2.5e-126 456.1 358 65.9
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 3.3e-126 455.7 353 67.1
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 3.3e-126 455.7 347 67.4
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 4.3e-126 455.3 355 66.2
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 4.3e-126 455.3 355 66.2
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 5.6e-126 454.9 351 66.1
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 5.6e-126 454.9 359 64.9
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 7.3e-126 454.5 344 66.9
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 7.3e-126 454.5 362 65.5
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.6e-125 453.4 345 67.8
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 1.6e-125 453.4 353 67.1
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 2.8e-125 452.6 356 66.3
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 4.7e-125 451.8 356 64.9
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 4.7e-125 451.8 350 66.0
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 4.7e-125 451.8 346 65.6
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 6.2e-125 451.4 353 67.1
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 6.2e-125 451.4 356 65.4
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 6.2e-125 451.4 361 64.3
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 8.0e-125 451.1 361 65.9
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 1.4e-124 450.3 356 66.3
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 1.8e-124 449.9 353 65.2
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 3.1e-124 449.1 341 66.3
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 3.1e-124 449.1 353 64.9
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 5.2e-124 448.4 352 65.9
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 5.2e-124 448.4 352 64.8
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 6.8e-124 448.0 352 65.1
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 8.9e-124 447.6 353 64.6
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 2.6e-123 446.0 363 65.3
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 3.4e-123 445.7 353 66.6
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 4.4e-123 445.3 365 64.9
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 7.5e-123 444.5 357 64.4
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 9.8e-123 444.1 348 64.9
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 9.8e-123 444.1 363 63.9
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 1.3e-122 443.7 341 67.2
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 1.7e-122 443.4 358 65.9
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 2.2e-122 443.0 321 71.7
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 2.2e-122 443.0 363 62.8
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 3.7e-122 442.2 343 67.9
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 3.7e-122 442.2 361 64.3
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 4.9e-122 441.8 350 66.6
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 4.9e-122 441.8 350 66.0
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 6.4e-122 441.4 362 63.0
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 8.3e-122 441.0 354 64.4
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 3.2e-121 439.1 304 70.4
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 4.1e-121 438.7 365 65.2
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 4.1e-121 438.7 348 65.2
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 5.4e-121 438.3 364 64.6
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 5.4e-121 438.3 364 64.6
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 7.1e-121 438.0 374 62.0
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 9.2e-121 437.6 363 62.0
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 2.1e-120 436.4 357 62.2
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 2.7e-120 436.0 366 61.7
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 4.6e-120 435.3 350 63.4
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 6.0e-120 434.9 351 62.7
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 6.0e-120 434.9 359 63.5
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 1.7e-119 433.3 363 63.1
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 5.1e-119 431.8 363 60.9
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 5.1e-119 431.8 365 61.4
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 5.1e-119 431.8 361 64.8
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 6.6e-119 431.4 375 62.4
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 6.6e-119 431.4 375 62.4
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 1.1e-118 430.6 363 62.8
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 1.9e-118 429.9 361 62.0
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 2.5e-118 429.5 358 61.2
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 4.3e-118 428.7 344 64.2
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 7.3e-118 427.9 351 65.5
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 9.5e-118 427.6 366 60.7
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 1.6e-117 426.8 305 68.5
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 1.6e-117 426.8 348 64.4
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 2.8e-117 426.0 369 62.1
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 3.6e-117 425.6 305 68.5
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 3.6e-117 425.6 305 68.5
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 3.6e-117 425.6 348 63.2
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 4.7e-117 425.2 430 55.8
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 6.2e-117 424.9 349 62.8
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 8.1e-117 424.5 363 60.6
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 1.1e-116 424.1 306 69.9
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.4e-116 423.7 342 63.5
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 3.1e-116 422.5 342 63.5
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 1.5e-115 420.2 362 60.2
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 2.9e-114 416.0 347 62.0
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 5.1e-111 405.2 351 58.7
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 3.3e-110 402.5 301 66.1
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 9.6e-110 401.0 329 63.2
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 1.8e-108 396.7 302 63.2
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 1.8e-108 396.7 367 60.5
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 1.8e-108 396.7 303 69.3
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 3.1e-108 396.0 367 57.2
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 4.0e-108 395.6 317 65.9
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 8.9e-108 394.4 344 60.8
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 7.6e-107 391.3 330 63.9
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 1.3e-106 390.6 325 62.8
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 8.4e-106 387.9 309 61.8
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 2.3e-103 379.8 328 61.3
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 3.2e-97 359.4 301 58.5
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 1.2e-96 357.5 335 57.3
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 1.6e-96 357.1 338 54.4
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 9.6e-94 347.8 303 57.8
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 2.4e-92 343.2 333 53.5
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 5.3e-92 342.0 303 57.4
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 6.9e-92 341.7 195 83.6
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 1.5e-91 340.5 195 83.6
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 1.5e-91 340.5 281 63.3
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 1.5e-91 340.5 195 84.1
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 1.5e-91 340.5 302 54.6
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 1.9e-89 333.6 283 63.3
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 1.6e-88 330.5 346 52.0
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 3.0e-87 326.2 281 61.6
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 1.4e-84 317.4 357 50.1
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 3.4e-67 259.6 154 79.2
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.9e-57 227.3 127 84.3
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 2.3e-55 220.3 209 56.0
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 3.8e-42 176.4 206 46.1
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 3.2e-41 173.3 101 81.2
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.2e-41 172.2 92 87.0
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 6.8e-39 165.6 178 50.6
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 2.3e-31 140.6 116 68.1
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 8.3e-29 132.1 108 60.2
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 5.4e-28 129.4 91 68.1
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 8.6e-26 122.1 74 74.3
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 3.3e-25 120.2 144 52.1
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 4.2e-25 119.8 74 73.0
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.5e-22 109.0 155 45.2
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 1.7e-21 107.8 131 48.1
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 2.0e-19 100.9 230 34.3
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 1.1e-12 78.6 41 85.4


User provided reference genes

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