Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 7.6e-177 623.6 296 100.0
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 3.4e-169 598.2 296 95.6
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 2.9e-152 542.0 296 84.1
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 4.4e-140 501.5 293 76.1
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 1.1e-138 496.9 288 77.8
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 1.1e-138 496.9 287 79.4
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 1.4e-138 496.5 280 79.6
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 5.4e-138 494.6 289 77.5
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 3.5e-137 491.9 293 76.5
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 1.3e-136 490.0 286 76.2
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 1.3e-136 490.0 284 76.4
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 2.9e-136 488.8 289 75.1
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 5.0e-136 488.0 288 77.4
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 1.5e-135 486.5 287 76.7
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 1.9e-135 486.1 287 76.3
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 1.9e-135 486.1 285 75.4
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 2.5e-135 485.7 288 76.4
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 9.4e-135 483.8 286 76.2
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 1.2e-134 483.4 287 76.0
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 1.6e-134 483.0 285 76.1
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 6.1e-134 481.1 282 77.3
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 8.0e-134 480.7 284 75.0
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 8.0e-134 480.7 286 75.2
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 8.0e-134 480.7 287 75.3
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 1.0e-133 480.3 296 72.3
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 5.2e-133 478.0 285 74.0
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 1.2e-132 476.9 285 74.7
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 1.5e-132 476.5 294 71.4
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 1.5e-132 476.5 285 75.4
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 2.0e-132 476.1 286 73.1
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 3.4e-132 475.3 286 74.1
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 7.5e-132 474.2 295 73.2
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 9.8e-132 473.8 286 73.8
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 9.8e-132 473.8 286 72.7
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 1.3e-131 473.4 289 72.3
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 1.3e-131 473.4 289 73.4
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.7e-131 473.0 286 73.8
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 2.2e-131 472.6 292 71.6
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 3.7e-131 471.9 288 72.9
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 4.9e-131 471.5 286 73.4
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 4.9e-131 471.5 285 74.4
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 8.3e-131 470.7 286 72.4
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 8.3e-131 470.7 289 73.7
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 1.4e-130 469.9 290 72.4
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 1.4e-130 469.9 288 73.6
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 2.0e-129 466.1 291 72.5
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 7.7e-129 464.2 283 73.5
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 1.0e-128 463.8 284 73.6
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 1.3e-128 463.4 285 72.6
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 2.3e-128 462.6 285 73.3
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 2.9e-128 462.2 286 72.4
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 2.9e-128 462.2 280 75.7
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 2.9e-128 462.2 287 75.6
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 2.9e-128 462.2 286 74.5
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 5.0e-128 461.5 280 75.0
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 8.6e-128 460.7 289 72.0
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 1.9e-127 459.5 271 76.0
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 1.9e-127 459.5 285 73.3
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 1.9e-127 459.5 285 72.3
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 1.9e-127 459.5 288 69.8
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 2.5e-127 459.1 287 73.2
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 4.3e-127 458.4 285 71.9
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 5.6e-127 458.0 285 71.9
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 7.3e-127 457.6 285 73.3
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 7.3e-127 457.6 285 71.9
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 2.1e-126 456.1 279 73.8
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 3.6e-126 455.3 294 71.1
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 4.7e-126 454.9 286 72.4
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 6.1e-126 454.5 286 72.4
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 8.0e-126 454.1 286 72.0
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 8.0e-126 454.1 284 72.2
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 1.0e-125 453.8 287 72.8
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 1.4e-125 453.4 282 73.0
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 1.4e-125 453.4 282 73.0
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 2.3e-125 452.6 301 68.8
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 2.3e-125 452.6 286 71.7
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 8.9e-125 450.7 286 72.4
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 3.2e-122 442.2 284 69.7
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 4.1e-122 441.8 306 66.7
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 3.5e-121 438.7 287 67.6
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 7.3e-119 431.0 310 64.2
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 1.4e-117 426.8 288 71.5
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 2.6e-116 422.5 295 64.7
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 9.2e-114 414.1 235 79.1
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.7e-112 409.8 245 75.5
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 3.0e-112 409.1 248 74.2
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 5.0e-112 408.3 286 66.4
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 1.9e-111 406.4 243 75.7
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 2.6e-108 396.0 244 73.4
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 2.2e-107 392.9 294 58.5
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 6.4e-107 391.3 286 61.9
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 5.1e-104 381.7 280 63.2
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 9.5e-103 377.5 248 68.1
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 6.2e-102 374.8 287 58.2
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 4.7e-94 348.6 199 79.9
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 1.8e-93 346.7 285 56.1
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 2.4e-85 319.7 195 73.3
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 3.2e-74 282.7 301 47.2
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 2.5e-71 273.1 151 79.5
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 1.8e-56 223.8 144 69.4
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 1.7e-51 207.2 114 77.2
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.2e-51 206.8 109 78.9
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 6.9e-45 185.3 99 81.8
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 5.9e-44 182.2 105 79.0
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 7.7e-44 181.8 282 37.9
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 6.1e-33 145.6 155 50.3
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.3e-32 143.7 111 56.8
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.2e-28 131.3 99 60.6
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 2.5e-26 123.6 88 64.8
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 4.5e-20 102.8 123 44.7
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 6.3e-14 82.4 41 85.4
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 1.1e-13 81.6 55 61.8
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 9.5e-10 68.6 43 69.8
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 6.1e-09 65.9 49 55.1
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.3e-06 58.2 42 57.1


User provided reference genes

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