Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.8e-154 549.3 283 100.0
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.3e-133 479.9 288 87.5
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 1.0e-125 453.8 255 92.2
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 3.3e-92 342.4 277 64.6
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 9.8e-89 330.9 237 75.1
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 6.4e-72 275.0 279 53.4
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 7.8e-70 268.1 274 51.8
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 1.8e-66 256.9 288 49.7
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 1.8e-66 256.9 293 48.8
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.8e-66 256.9 291 49.8
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 3.7e-64 249.2 301 47.2
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 6.4e-64 248.4 292 48.6
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 8.3e-64 248.1 262 50.0
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 1.4e-63 247.3 281 48.4
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 3.2e-63 246.1 286 49.0
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 1.2e-62 244.2 290 46.6
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.1e-62 243.4 282 48.9
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 7.8e-62 241.5 286 47.9
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 3.9e-61 239.2 328 43.0
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 5.1e-61 238.8 290 46.9
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 6.6e-61 238.4 282 47.9
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 2.5e-60 236.5 272 47.8
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 5.6e-60 235.3 291 46.0
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 9.5e-60 234.6 264 50.0
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 1.2e-59 234.2 301 45.2
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 3.6e-59 232.6 277 48.7
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 4.7e-59 232.3 289 45.3
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 4.7e-59 232.3 258 50.0
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 1.1e-58 231.1 258 48.8
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 1.4e-58 230.7 286 45.5
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.4e-58 230.7 282 46.5
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 1.4e-58 230.7 258 49.6
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 1.8e-58 230.3 288 45.1
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 2.4e-58 229.9 267 48.7
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 3.1e-58 229.6 286 46.2
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 3.1e-58 229.6 289 45.0
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 3.1e-58 229.6 304 45.1
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.0e-58 229.2 285 46.3
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 5.2e-58 228.8 282 45.4
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 8.9e-58 228.0 280 45.0
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 2.0e-57 226.9 259 46.7
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 2.6e-57 226.5 270 47.0
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 2.6e-57 226.5 288 43.8
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 7.6e-57 224.9 275 46.9
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 1.7e-56 223.8 265 47.2
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 6.4e-56 221.9 267 46.4
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 6.4e-56 221.9 286 45.8
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 6.4e-56 221.9 271 47.2
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 8.4e-56 221.5 281 43.8
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 1.1e-55 221.1 281 44.5
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 4.1e-55 219.2 259 46.3
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 2.1e-54 216.9 267 46.4
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 3.5e-54 216.1 283 44.2
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 4.6e-54 215.7 284 44.0
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 7.8e-54 214.9 259 47.9
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 1.3e-53 214.2 281 44.5
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 1.7e-53 213.8 257 46.3
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 3.0e-53 213.0 294 43.2
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 5.1e-53 212.2 280 42.9
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 5.1e-53 212.2 264 45.5
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 5.1e-53 212.2 284 42.6
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 8.7e-53 211.5 259 44.4
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.9e-52 210.3 265 45.7
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 3.3e-52 209.5 262 45.4
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 3.3e-52 209.5 265 44.9
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 4.3e-52 209.1 256 44.1
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 1.2e-51 207.6 283 44.2
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 2.8e-51 206.5 256 45.3
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.8e-51 206.5 230 47.0
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 6.2e-51 205.3 257 44.0
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.8e-50 203.8 266 42.9
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 5.2e-50 202.2 253 44.3
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 9.0e-50 201.4 266 44.7
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.2e-49 201.1 243 43.6
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 1.2e-49 201.1 288 40.6
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 2.6e-49 199.9 259 44.4
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 4.4e-49 199.1 321 38.6
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.3e-48 197.6 250 42.8
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 1.7e-48 197.2 251 44.2
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 2.2e-48 196.8 256 44.5
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 3.8e-48 196.1 289 41.5
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 6.4e-48 195.3 279 42.7
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 2.4e-47 193.4 240 42.9
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 3.2e-47 193.0 284 40.1
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 4.2e-47 192.6 281 40.6
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 1.2e-46 191.0 240 42.1
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 1.2e-46 191.0 284 40.8
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 1.2e-46 191.0 266 39.8
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 7.8e-46 188.3 311 38.6
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 7.8e-46 188.3 308 38.6
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 3.0e-45 186.4 251 41.0
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 3.9e-45 186.0 251 41.0
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 3.9e-45 186.0 251 41.0
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 3.9e-45 186.0 314 38.9
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 5.1e-45 185.7 275 40.0
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 6.6e-45 185.3 275 40.7
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 1.1e-44 184.5 251 41.4
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 1.5e-44 184.1 266 39.8
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 2.5e-44 183.3 251 40.6
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 2.5e-44 183.3 269 39.4
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 3.3e-44 183.0 276 37.7
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 3.3e-44 183.0 235 45.1
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 5.6e-44 182.2 261 42.1
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 1.6e-43 180.6 248 40.7
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.6e-43 180.6 249 41.0
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 3.6e-43 179.5 205 48.8
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 2.4e-42 176.8 289 39.1
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 9.0e-42 174.9 284 39.4
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 1.2e-41 174.5 252 40.1
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 7.6e-41 171.8 252 39.3
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 7.6e-41 171.8 185 49.2
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 7.6e-41 171.8 249 39.0
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 8.4e-40 168.3 196 46.4
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 5.4e-39 165.6 246 38.2
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 2.1e-38 163.7 281 37.0
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 2.7e-38 163.3 262 39.3
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 2.7e-38 163.3 262 39.3
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 1.0e-37 161.4 196 48.5
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 1.3e-37 161.0 196 48.5
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 1.5e-36 157.5 224 41.1
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 3.3e-36 156.4 226 42.0
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.3e-35 154.5 248 38.7
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 4.0e-34 149.4 213 41.8
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 6.9e-34 148.7 224 41.1
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 3.4e-33 146.4 259 37.1
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 8.4e-32 141.7 221 38.5
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.6e-30 137.5 224 35.7
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 7.9e-30 135.2 189 42.3
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 7.9e-30 135.2 132 50.8
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 7.9e-30 135.2 210 38.1
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 1.0e-29 134.8 138 51.4
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 1.9e-28 130.6 251 31.9
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 7.4e-28 128.6 237 34.2
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 1.1e-23 114.8 221 33.5
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 7.1e-23 112.1 149 40.9
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 6.0e-22 109.0 149 40.9
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 6.0e-22 109.0 221 33.9
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 5.7e-20 102.4 231 31.6
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 8.2e-19 98.6 213 32.4
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 1.4e-18 97.8 183 34.4
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.8e-18 97.4 143 37.8
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 1.7e-16 90.9 177 32.8
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 8.5e-16 88.6 138 36.2
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 1.1e-15 88.2 101 43.6
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 1.7e-11 74.3 98 43.9
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 8.2e-11 72.0 113 38.1
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 9.1e-10 68.6 59 54.2
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 3.8e-08 63.2 131 26.7
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 4.7e-06 56.2 67 41.8


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