Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028659 Chenopodium quinoa HOM05D010377 ORTHO05D011364 0.0e+00 1291.9 645 100.0
AUR62008080 Chenopodium quinoa HOM05D010377 ORTHO05D011364 0.0e+00 1076.6 653 84.2
EL10Ac5g10602 Beta vulgaris HOM05D010377 ORTHO05D011364 1.7e-152 543.9 514 60.1
EL10Ac5g10601 Beta vulgaris HOM05D010377 ORTHO05D011364 3.9e-117 426.4 641 43.1
AUR62008085 Chenopodium quinoa HOM05D010377 ORTHO05D011364 2.4e-90 337.4 747 34.7
AUR62028664 Chenopodium quinoa HOM05D000151 ORTHO05D011364 5.0e-88 329.7 721 35.2
Ah.06g187160 Amaranthus hybridus HOM05D010377 ORTHO05D011364 3.0e-77 293.9 679 35.9
EL10Ac5g10604 Beta vulgaris HOM05D010377 ORTHO05D011364 1.3e-67 261.9 788 29.9
AUR62028663 Chenopodium quinoa HOM05D010377 ORTHO05D011364 3.3e-55 220.7 516 33.3
Ah.02g111100 Amaranthus hybridus HOM05D010377 ORTHO05D011364 2.1e-54 218.0 662 29.0
Hund02799 Selenicereus undatus HOM05D000151 ORTHO05D000074 2.6e-52 211.1 685 29.1
EL10Ac5g10605 Beta vulgaris HOM05D010377 ORTHO05D011364 4.0e-45 187.2 192 54.7
AUR62028713 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.0e-41 174.9 691 27.1
AUR62028661 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.5e-39 168.7 223 46.2
EL10Ac5g10638 Beta vulgaris HOM05D000151 ORTHO05D000074 3.3e-39 167.5 692 26.3
AUR62028682 Chenopodium quinoa HOM05D000151 ORTHO05D000074 5.6e-39 166.8 655 25.8
Hund19589 Selenicereus undatus HOM05D000151 ORTHO05D011364 5.6e-39 166.8 692 28.3
AUR62008102 Chenopodium quinoa HOM05D000151 ORTHO05D000074 6.2e-38 163.3 641 26.1
AUR62008108 Chenopodium quinoa HOM05D000151 ORTHO05D000074 6.2e-38 163.3 692 27.6
AUR62010452 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.8e-37 161.8 705 26.4
AUR62008101 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.6e-36 157.9 650 26.9
EL10Ac5g10608 Beta vulgaris HOM05D000151 ORTHO05D011364 1.1e-34 152.5 664 28.0
AUR62008096 Chenopodium quinoa HOM05D000151 ORTHO05D011364 5.4e-34 150.2 591 28.6
AUR62008081 Chenopodium quinoa HOM05D000151 ORTHO05D011364 9.2e-34 149.4 694 27.1
AUR62030461 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.2e-33 149.1 711 24.8
AUR62028673 Chenopodium quinoa HOM05D000151 ORTHO05D000074 6.6e-32 143.3 641 26.8
AUR62008095 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.9e-31 141.7 627 27.1
AUR62028674 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.2e-30 139.0 451 31.5
AUR62028672 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.6e-30 137.5 653 25.9
AUR62034700 Chenopodium quinoa HOM05D000151 ORTHO05D011364 8.9e-29 132.9 408 31.1
EL10Ac5g10637 Beta vulgaris HOM05D000151 ORTHO05D000074 7.5e-28 129.8 657 24.4
AUR62028670 Chenopodium quinoa HOM05D000151 ORTHO05D000074 7.5e-28 129.8 423 28.6
EL10Ac5g10609 Beta vulgaris HOM05D000151 ORTHO05D000074 2.2e-27 128.3 372 31.2
AUR62008086 Chenopodium quinoa HOM05D000151 ORTHO05D000074 6.4e-27 126.7 677 24.5
AUR62008131 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.4e-26 124.8 655 24.7
AUR62008082 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.6e-25 122.1 480 26.9
AUR62028684 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.6e-25 122.1 514 28.2
AUR62008090 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.7e-25 121.3 429 28.2
AUR62028679 Chenopodium quinoa HOM05D000151 ORTHO05D011364 6.0e-25 120.2 565 27.4
Ah.11g050860 Amaranthus hybridus HOM05D010377 ORTHO05D011364 9.5e-23 112.8 194 35.1
EL10Ac5g10611 Beta vulgaris HOM05D000151 ORTHO05D000074 1.2e-22 112.5 361 28.5
AUR62028676 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.1e-22 111.7 364 28.0
Sc09g0005460 Simmondsia chinensis HOM05D000151 ORTHO05D000074 2.4e-21 108.2 366 28.4
QL06p052352 Quercus lobata HOM05D000151 ORTHO05D000074 4.0e-21 107.5 362 28.2
AUR62008130 Chenopodium quinoa HOM05D000151 ORTHO05D000074 6.8e-21 106.7 683 24.6
AUR62008098 Chenopodium quinoa HOM05D000151 ORTHO05D000074 4.4e-20 104.0 367 26.4
AUR62008099 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.3e-19 102.4 378 28.0
AUR62028680 Chenopodium quinoa HOM05D000151 ORTHO05D011364 1.4e-18 99.0 597 24.5
AUR62033879 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.9e-18 98.6 187 35.8
QL06p052345 Quercus lobata HOM05D000151 ORTHO05D000074 4.2e-18 97.4 368 26.1
Sabra05G0086100 Salix brachista HOM05D000151 ORTHO05D000074 4.2e-18 97.4 404 26.2
Rhsim10G0203700 Rhododendron simsii HOM05D000151 ORTHO05D000074 1.2e-17 95.9 433 26.1
Cfa007043 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.1e-17 95.1 368 26.6
AUR62003438 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.0e-16 92.8 366 26.8
PGSC0003DMG400006038 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.3e-16 91.7 429 24.7
FAN24G3248 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.6e-16 90.1 417 25.9
Psat5g209160 Pisum sativum HOM05D000151 ORTHO05D000074 6.6e-16 90.1 406 24.6
AUR62033878 Chenopodium quinoa HOM05D000151 ORTHO05D000074 8.7e-16 89.7 339 28.9
FvH4_2g15930 Fragaria vesca HOM05D000151 ORTHO05D000074 8.7e-16 89.7 425 26.4
AUR62028675 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.5e-15 89.0 443 24.6
FAN15G2361 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.3e-15 87.8 366 26.5
AUR62008105 Chenopodium quinoa HOM05D000151 ORTHO05D000074 2.1e-14 85.1 432 25.7
FAN20G3023 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.8e-14 84.7 366 26.2
CANSAT25G1224 Cannabis sativa HOM05D000151 ORTHO05D000074 6.2e-14 83.6 370 26.2
RcHm_v2.0_Chr6g0279451 Rosa chinensis HOM05D000151 ORTHO05D000074 6.2e-14 83.6 414 25.4
AUR62008087 Chenopodium quinoa HOM05D010377 ORTHO05D011364 1.1e-13 82.8 98 44.9
Eucgr.I01472 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.4e-13 82.4 349 28.1
Phvul.003G267700 Phaseolus vulgaris HOM05D000151 ORTHO05D000074 1.4e-13 82.4 380 25.0
Duzib147G0484 Durio zibethinus HOM05D000151 ORTHO05D000074 2.4e-13 81.6 420 23.1
Eucgr.I01468 Eucalyptus grandis HOM05D000151 ORTHO05D000074 2.4e-13 81.6 350 24.9
RcHm_v2.0_Chr2g0098141 Rosa chinensis HOM05D000151 ORTHO05D000074 4.0e-13 80.9 366 26.5
CiPaw.07G005500 Carya illinoinensis HOM05D000151 ORTHO05D000074 5.3e-13 80.5 420 26.7
MELO3C005203.2 Cucumis melo HOM05D000151 ORTHO05D000074 6.9e-13 80.1 437 22.9
Eucgr.I01474 Eucalyptus grandis HOM05D000151 ORTHO05D000074 6.9e-13 80.1 361 24.7
CANSAT25G3017 Cannabis sativa HOM05D000151 ORTHO05D000074 9.0e-13 79.7 367 25.6
AUR62008094 Chenopodium quinoa HOM05D000151 ORTHO05D011364 9.0e-13 79.7 415 25.8
FAN19G1876 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.0e-13 79.7 366 26.0
MD15G1235700 Malus domestica HOM05D000151 ORTHO05D000074 1.2e-12 79.3 390 24.4
Eucgr.I01467 Eucalyptus grandis HOM05D000151 ORTHO05D000074 1.5e-12 79.0 362 25.4
FvH4_1g10850 Fragaria vesca HOM05D000151 ORTHO05D000074 1.5e-12 79.0 371 26.1
Medtr3g091990 Medicago truncatula HOM05D000151 ORTHO05D000074 1.5e-12 79.0 367 23.4
Ciclev10028612m.g Citrus clementina HOM05D000151 ORTHO05D000074 3.4e-12 77.8 367 24.3
CSS0022513 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 4.4e-12 77.4 411 25.3
Lalb_Chr16g0391571 Lupinus albus HOM05D000151 ORTHO05D000074 5.8e-12 77.0 415 23.1
Prupe.8G172400 Prunus persica HOM05D000151 ORTHO05D000074 9.9e-12 76.3 380 24.2
CsaV3_6G047620 Cucumis sativus L. HOM05D000151 ORTHO05D000074 1.3e-11 75.9 400 25.2
MD02G1122000 Malus domestica HOM05D000151 ORTHO05D000074 1.3e-11 75.9 298 24.2
Medtr1g007260 Medicago truncatula HOM05D000151 ORTHO05D000074 1.3e-11 75.9 360 26.1
ClCG01G020700 Citrullus lanatus HOM05D000151 ORTHO05D000074 1.7e-11 75.5 396 24.5
AUR62040512 Chenopodium quinoa HOM05D010377 ORTHO05D011364 2.9e-11 74.7 479 24.2
Prupe.7G177200 Prunus persica HOM05D000151 ORTHO05D000074 3.8e-11 74.3 392 23.5
Potri.005G105100 Populus trichocarpa HOM05D000151 ORTHO05D000074 4.9e-11 73.9 422 23.2
MELO3C007953.2 Cucumis melo HOM05D000151 ORTHO05D000074 6.4e-11 73.6 394 24.1
CsaV3_5G017550 Cucumis sativus L. HOM05D000151 ORTHO05D000074 8.4e-11 73.2 443 23.3
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.4e-11 73.2 362 22.4
Sabra05G0086200 Salix brachista HOM05D000151 ORTHO05D000074 1.4e-10 72.4 403 23.6
VMungo0251G1278 Vigna mungo HOM05D000151 ORTHO05D000074 1.4e-10 72.4 370 24.9
Prupe.7G176500 Prunus persica HOM05D000151 ORTHO05D000074 2.4e-10 71.6 380 24.5
QL06p052385 Quercus lobata HOM05D000151 ORTHO05D000074 2.4e-10 71.6 350 24.9
AUR62036509 Chenopodium quinoa HOM05D010377 ORTHO05D011364 3.2e-10 71.2 120 38.3
MD05G1128300 Malus domestica HOM05D000151 ORTHO05D000074 3.2e-10 71.2 439 24.1
QL11p053223 Quercus lobata HOM05D000151 ORTHO05D000074 3.2e-10 71.2 392 25.0
TWI75G0953 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.2e-10 70.9 360 25.3
Sabra05G0086300 Salix brachista HOM05D000151 ORTHO05D000074 5.4e-10 70.5 373 23.9
Dinv12042 Davidia involucrata HOM05D000151 ORTHO05D000074 9.3e-10 69.7 390 23.8
AT1G44080 Arabidopsis thaliana HOM05D000151 ORTHO05D000074 1.2e-09 69.3 348 24.4
AUR62028712 Chenopodium quinoa HOM05D000151 ORTHO05D000074 1.6e-09 68.9 101 35.6
Lj2g0017165 Lotus japonicus HOM05D000151 ORTHO05D000074 1.6e-09 68.9 360 25.0
Prupe.7G177100 Prunus persica HOM05D000151 ORTHO05D000074 2.1e-09 68.6 395 22.8
THA.LOC104819663 Tarenaya hassleriana HOM05D000151 ORTHO05D000074 2.1e-09 68.6 437 23.1
Gorai.003G004600 Gossypium raimondii HOM05D000151 ORTHO05D000074 3.5e-09 67.8 422 24.6
Carub.0007s0452 Capsella rubella HOM05D000151 ORTHO05D000074 4.6e-09 67.4 375 23.5
Gohir.A02G175500 Gossypium hirsutum HOM05D000151 ORTHO05D000074 4.6e-09 67.4 422 25.1
QL11p052366 Quercus lobata HOM05D000151 ORTHO05D000074 4.6e-09 67.4 383 25.1
AUR62039086 Chenopodium quinoa HOM05D010117 ORTHO05D012431 6.0e-09 67.0 353 21.8
AL4G18420 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 1.0e-08 66.2 353 25.2
Potri.005G105200 Populus trichocarpa HOM05D000151 ORTHO05D000074 1.7e-08 65.5 422 22.3
Aqoxy7G00902 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.7e-08 63.2 379 23.0
AUR62008083 Chenopodium quinoa HOM05D010377 ORTHO05D137647 8.7e-08 63.2 111 35.1
AUR62040513 Chenopodium quinoa HOM05D000151 ORTHO05D000074 3.3e-07 61.2 145 33.1
BraA10t44714Z Brassica rapa HOM05D000191 ORTHO05D002272 5.6e-07 60.5 163 27.6
A10p26570 Brassica napus HOM05D000191 ORTHO05D002272 9.6e-07 59.7 163 27.0
AL5G14310 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 1.6e-06 58.9 345 24.3
AL1G52130 Arabidopsis lyrata HOM05D000151 ORTHO05D000074 2.8e-06 58.2 363 22.6
AT5G11140 Arabidopsis thaliana HOM05D002972 ORTHO05D002272 3.6e-06 57.8 164 27.4
C09p65720 Brassica napus HOM05D000191 ORTHO05D000122 6.2e-06 57.0 163 27.0
Carub.0001s3497 Capsella rubella HOM05D000151 ORTHO05D000074 6.2e-06 57.0 350 23.4
BolC9t59395H Brassica oleracea HOM05D000191 ORTHO05D002272 8.1e-06 56.6 168 26.8


User provided reference genes

Program Settings