Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.5e-300 1034.6 520 100.0
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 3.9e-269 931.0 520 89.0
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 1.5e-204 716.5 513 68.8
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 2.3e-184 649.4 512 66.4
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 3.0e-176 622.5 521 61.0
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 2.1e-174 616.3 405 78.5
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 1.5e-159 567.0 515 56.7
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 1.1e-157 560.8 515 56.7
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 1.5e-156 557.0 515 55.1
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 7.7e-156 554.7 512 55.3
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 1.0e-155 554.3 515 54.8
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 2.0e-151 540.0 520 53.7
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 3.3e-151 539.3 518 54.1
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 3.7e-150 535.8 514 52.1
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 6.3e-150 535.0 522 54.8
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 2.6e-148 529.6 525 54.3
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 3.4e-148 529.3 514 53.5
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.0e-147 527.7 517 52.6
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 8.5e-147 524.6 515 52.2
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.2e-146 522.3 515 52.2
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 1.2e-145 520.8 480 55.8
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 2.1e-145 520.0 509 50.3
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 7.9e-145 518.1 516 51.9
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 1.0e-144 517.7 509 54.2
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.8e-144 516.9 509 51.7
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 3.9e-144 515.8 515 52.0
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 3.9e-144 515.8 515 52.0
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 5.1e-144 515.4 517 51.1
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 1.1e-143 514.2 452 57.1
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 5.7e-143 511.9 534 50.2
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 7.4e-143 511.5 517 52.4
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 9.7e-143 511.1 513 51.7
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 2.2e-142 510.0 510 51.4
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 2.2e-142 510.0 514 52.1
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 2.8e-142 509.6 515 50.5
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 6.3e-142 508.4 516 53.3
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 8.2e-142 508.1 519 52.0
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.1e-141 507.7 513 51.3
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.1e-141 507.7 509 50.7
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 1.4e-141 507.3 497 53.7
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 3.5e-140 502.7 508 51.4
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 5.9e-140 501.9 494 53.8
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 5.9e-140 501.9 514 50.8
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 1.7e-139 500.4 517 49.9
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.6e-137 493.8 493 53.5
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 3.7e-134 482.6 523 49.3
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 2.4e-133 479.9 491 52.5
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 7.0e-133 478.4 515 50.3
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 9.1e-133 478.0 514 48.8
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 3.5e-132 476.1 513 49.7
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 3.5e-132 476.1 491 50.1
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 7.7e-132 474.9 514 50.4
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 5.0e-131 472.2 515 48.7
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 8.5e-131 471.5 513 49.9
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 2.5e-130 469.9 512 48.6
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 4.2e-130 469.2 509 48.3
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 5.5e-130 468.8 492 52.4
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 7.2e-130 468.4 498 50.6
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 7.2e-130 468.4 512 46.9
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 9.4e-130 468.0 513 49.3
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 4.7e-129 465.7 512 48.4
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 6.1e-129 465.3 519 48.9
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 8.0e-129 464.9 511 48.5
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 3.0e-128 463.0 519 47.4
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 4.0e-128 462.6 512 49.0
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 5.2e-128 462.2 518 49.4
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 6.8e-128 461.8 530 47.7
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 6.8e-128 461.8 492 49.6
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 2.6e-127 459.9 493 48.9
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 3.4e-127 459.5 510 48.4
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 5.7e-127 458.8 516 46.5
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 9.8e-127 458.0 519 47.0
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.2e-126 456.8 514 45.9
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 2.8e-126 456.4 514 47.7
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 4.8e-126 455.7 523 48.4
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 4.8e-126 455.7 513 47.8
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 4.8e-126 455.7 514 47.7
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 6.3e-126 455.3 494 50.4
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 4.1e-125 452.6 508 48.2
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 1.2e-124 451.1 508 47.8
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 1.6e-124 450.7 509 47.5
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 2.7e-124 449.9 492 48.4
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 3.5e-124 449.5 492 48.2
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 1.0e-123 448.0 525 48.2
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.8e-123 446.0 516 46.3
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.5e-122 444.1 505 48.3
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 6.8e-120 435.3 492 48.0
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.2e-116 424.5 494 46.6
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 1.7e-115 420.6 506 45.8
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 3.8e-115 419.5 494 45.3
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 9.5e-114 414.8 494 44.9
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.8e-112 410.6 344 56.1
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 1.8e-112 410.6 522 46.7
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 2.0e-111 407.1 492 46.3
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 2.6e-111 406.8 494 44.7
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 7.5e-111 405.2 395 54.4
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 4.9e-110 402.5 463 50.1
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.4e-93 347.1 332 49.7
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 9.2e-93 345.1 532 38.5
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 2.8e-81 307.0 391 43.5
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.7e-81 306.2 272 54.4
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.3e-73 281.6 322 49.4
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 2.6e-71 273.9 347 44.1
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-68 264.6 197 61.9
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-68 264.6 197 61.9
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 4.6e-68 263.1 219 55.7
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 8.7e-59 232.3 507 31.6
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 8.7e-59 232.3 541 31.8
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 3.1e-56 223.8 209 50.2
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 1.5e-55 221.5 470 33.0
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.1e-45 188.7 116 76.7
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 1.8e-40 171.4 495 27.9
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 1.9e-37 161.4 505 26.1
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.1e-29 135.6 115 53.0
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 5.5e-29 133.3 142 45.1
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 1.6e-28 131.7 193 44.0
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 1.6e-28 131.7 142 44.4
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 3.3e-26 124.0 116 50.9
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 8.5e-22 109.4 172 43.6
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 1.5e-21 108.6 173 38.2
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.5e-18 98.6 117 41.9
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 5.9e-15 86.7 123 41.5
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 1.2e-12 79.0 217 26.3
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 7.7e-07 59.7 41 61.0


User provided reference genes

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