Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 4.1e-135 485.3 374 100.0
AUR62008051 Chenopodium quinoa HOM05D005998 ORTHO05D007664 6.0e-110 401.7 310 89.7
EL10Ac5g10571 Beta vulgaris HOM05D005998 ORTHO05D007664 1.7e-88 330.5 325 61.5
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 3.9e-69 266.2 326 55.8
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 2.4e-66 256.9 279 62.7
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 2.2e-64 250.4 267 64.4
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 2.3e-61 240.4 326 59.5
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 6.7e-61 238.8 326 60.4
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 2.5e-60 236.9 326 60.1
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 3.3e-60 236.5 278 67.3
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 3.3e-60 236.5 325 60.0
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 9.7e-60 235.0 310 54.8
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 3.7e-59 233.0 278 66.5
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 1.1e-58 231.5 329 45.9
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 1.4e-58 231.1 326 59.5
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 2.4e-58 230.3 326 54.6
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 1.2e-57 228.0 327 45.6
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 1.2e-57 228.0 326 52.8
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 5.9e-57 225.7 314 48.4
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 1.7e-56 224.2 323 51.7
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 6.5e-56 222.2 323 48.3
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 6.5e-56 222.2 323 51.4
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 6.5e-56 222.2 323 51.4
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 1.1e-55 221.5 362 37.6
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 1.4e-55 221.1 315 55.6
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 1.4e-55 221.1 326 50.9
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 1.9e-55 220.7 325 48.0
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 7.2e-55 218.8 318 50.0
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 9.4e-55 218.4 322 49.1
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 2.1e-54 217.2 322 52.2
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 1.0e-53 214.9 325 49.8
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 3.0e-53 213.4 326 49.4
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 3.0e-53 213.4 323 49.2
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 5.1e-53 212.6 323 47.7
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 6.7e-53 212.2 281 59.4
THA.LOC104819025 Tarenaya hassleriana HOM05D005998 ORTHO05D007664 8.8e-53 211.8 320 49.7
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 4.3e-52 209.5 278 51.8
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 9.7e-52 208.4 324 49.7
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 2.2e-51 207.2 324 47.5
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 6.3e-51 205.7 276 53.3
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 1.1e-50 204.9 316 49.1
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 1.5e-49 201.1 277 51.6
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 7.7e-49 198.7 266 51.9
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 1.3e-48 198.0 312 53.2
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 6.5e-48 195.7 322 39.4
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 6.5e-48 195.7 318 52.5
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 1.9e-47 194.1 321 47.0
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 7.2e-47 192.2 271 45.8
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 4.7e-46 189.5 326 48.5
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 7.9e-46 188.7 326 49.4
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 2.3e-45 187.2 324 48.5
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 7.4e-44 182.2 277 40.4
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 4.1e-42 176.4 324 48.5
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 9.1e-42 175.3 279 47.7
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 5.9e-41 172.6 267 55.1
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 1.0e-40 171.8 278 47.1
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 2.2e-40 170.6 287 49.1
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 5.0e-40 169.5 276 47.1
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 1.6e-38 164.5 375 40.3
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 1.0e-37 161.8 284 53.5
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 6.7e-37 159.1 270 47.0
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 3.7e-35 153.3 276 46.0
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 3.7e-35 153.3 276 46.0
Duzib211G0440 Durio zibethinus HOM05D005998 ORTHO05D007664 6.3e-35 152.5 217 54.8
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 8.2e-35 152.1 335 40.0
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.4e-34 150.6 276 51.4
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 3.1e-34 150.2 319 44.8
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 7.0e-34 149.1 327 46.2
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 4.5e-33 146.4 158 64.6
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 1.0e-32 145.2 278 46.4
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 1.7e-32 144.4 280 42.9
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 2.2e-32 144.1 326 46.0
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 6.5e-32 142.5 301 44.2
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 8.5e-32 142.1 301 43.5
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 1.6e-30 137.9 324 46.9
RcHm_v2.0_Chr5g0064201 Rosa chinensis HOM05D005998 ORTHO05D007664 2.1e-30 137.5 165 54.5
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 6.8e-29 132.5 326 45.4
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 2.0e-28 131.0 278 42.1
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 9.7e-28 128.6 326 45.1
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 9.7e-28 128.6 326 45.7
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 6.3e-27 125.9 82 70.7
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 1.4e-26 124.8 279 41.2
ATR0743G036 Amborella trichopoda HOM05D005998 ORTHO05D007664 8.0e-22 109.0 260 43.1
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 8.0e-22 109.0 82 61.0
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 3.0e-21 107.1 280 41.4
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 4.0e-21 106.7 281 39.9
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 2.0e-20 104.4 270 39.6
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-20 104.0 317 36.3
CDE08G0319 Ceratophyllum demersum HOM05D005998 ORTHO05D007664 3.4e-20 103.6 144 54.9
MD10G1146000 Malus domestica HOM05D005998 ORTHO05D007664 1.7e-19 101.3 272 42.3
Duzib138G0171 Durio zibethinus HOM05D005998 ORTHO05D007664 1.1e-18 98.6 82 53.7
Zm00001eb112540 Zea mays HOM05D005998 ORTHO05D007664 1.2e-17 95.1 276 38.4
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.9e-16 90.5 292 28.4
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-15 88.2 253 40.7
Zm00001eb182340 Zea mays HOM05D005998 ORTHO05D015715 1.6e-14 84.7 82 51.2
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 6.1e-14 82.8 230 40.9
Zm00001eb048880 Zea mays HOM05D005998 ORTHO05D015715 6.1e-14 82.8 82 51.2
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 8.0e-14 82.4 190 32.1
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 8.0e-14 82.4 270 40.4
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 6.8e-13 79.3 299 28.1
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 6.8e-13 79.3 273 38.5
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 6.8e-13 79.3 273 38.5
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 6.8e-13 79.3 273 38.5
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 6.8e-13 79.3 273 38.5
ECA232G4734 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.0e-12 77.8 284 35.6
ECA247G2923 Erigeron canadensis HOM05D005998 ORTHO05D003386 2.6e-12 77.4 273 37.7
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 2.6e-12 77.4 307 36.5
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 9.8e-12 75.5 204 30.9
ECA247G3549 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.8e-11 73.9 277 42.2
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 1.4e-10 71.6 228 26.8
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 1.8e-10 71.2 212 42.0
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 4.1e-10 70.1 187 29.9
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 2.7e-09 67.4 152 30.9
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 3.9e-08 63.5 255 39.2
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 3.9e-08 63.5 155 49.0
PSO017G7250 Papaver somniferum HOM05D005998 ORTHO05D007664 1.1e-07 62.0 190 28.9
PSO017G3446 Papaver somniferum HOM05D005998 ORTHO05D007664 1.5e-07 61.6 155 31.6


User provided reference genes

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