Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 4.0e-100 368.2 206 100.0
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 3.7e-93 345.1 204 94.6
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 6.7e-79 297.7 206 84.0
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 2.4e-60 236.1 254 57.1
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 3.7e-53 212.2 160 67.5
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.5e-51 205.7 187 60.4
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 3.5e-51 205.7 187 60.4
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 8.5e-50 201.1 184 60.9
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 8.5e-50 201.1 166 71.7
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 1.1e-49 200.7 172 64.5
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 1.5e-49 200.3 152 75.0
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 1.9e-49 199.9 155 65.8
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 3.2e-49 199.1 179 60.3
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.2e-48 197.2 176 63.1
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 1.2e-48 197.2 156 67.3
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 2.1e-48 196.4 192 60.4
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.1e-48 196.4 161 66.5
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 2.1e-48 196.4 162 72.8
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 3.6e-48 195.7 155 72.9
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 3.6e-48 195.7 153 66.0
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 4.7e-48 195.3 186 61.3
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 4.7e-48 195.3 163 68.7
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 8.0e-48 194.5 172 61.6
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 1.0e-47 194.1 169 62.1
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.8e-47 193.4 176 63.1
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 2.3e-47 193.0 159 62.9
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 3.0e-47 192.6 169 59.8
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 3.0e-47 192.6 172 58.7
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 3.0e-47 192.6 187 57.2
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 5.2e-47 191.8 174 56.9
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 8.8e-47 191.0 172 58.1
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 8.8e-47 191.0 187 56.1
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 2.6e-46 189.5 168 67.9
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 2.6e-46 189.5 162 61.1
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 3.3e-46 189.1 171 67.3
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 3.3e-46 189.1 158 69.0
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 4.4e-46 188.7 171 60.2
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.3e-45 187.2 181 62.4
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 1.7e-45 186.8 201 60.2
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 2.2e-45 186.4 165 60.6
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 2.8e-45 186.0 166 62.0
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 3.7e-45 185.7 214 52.3
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 4.8e-45 185.3 171 58.5
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 8.2e-45 184.5 187 54.0
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 8.2e-45 184.5 177 55.9
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 8.2e-45 184.5 200 55.0
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 1.1e-44 184.1 176 59.7
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 1.1e-44 184.1 153 65.4
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 1.1e-44 184.1 153 62.7
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.8e-44 183.3 157 70.7
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 2.4e-44 183.0 167 65.9
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 2.4e-44 183.0 163 66.9
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 2.4e-44 183.0 200 55.0
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.1e-44 182.2 160 60.6
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 5.3e-44 181.8 205 57.6
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 7.0e-44 181.4 182 62.6
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 2.0e-43 179.9 198 54.0
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 2.0e-43 179.9 168 63.7
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 2.7e-43 179.5 162 68.5
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 2.7e-43 179.5 186 57.0
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 3.5e-43 179.1 182 54.4
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 7.7e-43 177.9 184 63.0
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 1.0e-42 177.6 152 59.2
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 3.8e-42 175.6 156 64.7
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 6.5e-42 174.9 205 52.7
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 8.5e-42 174.5 199 58.8
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.5e-41 173.7 199 59.3
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.9e-41 173.3 174 55.7
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 1.9e-41 173.3 201 56.7
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 2.5e-41 172.9 166 56.6
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 3.2e-41 172.6 182 50.0
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.2e-41 172.6 162 63.6
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 4.2e-41 172.2 186 55.4
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 4.2e-41 172.2 143 69.2
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 4.2e-41 172.2 161 55.3
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 4.2e-41 172.2 202 55.9
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 5.5e-41 171.8 156 56.4
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 1.2e-40 170.6 153 62.1
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 1.6e-40 170.2 183 55.7
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 2.1e-40 169.9 206 51.9
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 2.1e-40 169.9 206 51.9
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 3.6e-40 169.1 206 51.5
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 3.6e-40 169.1 206 51.5
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 3.6e-40 169.1 169 60.4
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 6.1e-40 168.3 192 54.7
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 1.0e-39 167.5 206 51.0
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 1.8e-39 166.8 180 58.9
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 1.8e-39 166.8 106 76.4
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 1.8e-39 166.8 164 59.8
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 2.3e-39 166.4 185 51.4
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 3.0e-39 166.0 197 55.8
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 6.8e-39 164.9 188 50.5
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.6e-38 162.9 170 55.9
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 2.6e-38 162.9 206 54.4
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 3.4e-38 162.5 112 70.5
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 5.7e-38 161.8 112 71.4
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.7e-37 160.2 145 64.8
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 2.8e-37 159.5 106 66.0
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 2.4e-36 156.4 169 58.0
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 3.1e-36 156.0 112 66.1
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 4.5e-35 152.1 161 52.8
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 1.7e-34 150.2 106 69.8
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.9e-34 149.4 189 48.1
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.0e-31 141.0 159 57.2
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 1.4e-28 130.6 88 69.3
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 2.7e-27 126.3 100 57.0
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 5.0e-26 122.1 136 53.7
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 1.1e-25 120.9 108 52.8
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 2.5e-25 119.8 101 53.5
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 4.3e-25 119.0 140 49.3
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 6.8e-23 111.7 106 50.9
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 2.5e-17 93.2 154 43.5
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 6.2e-16 88.6 77 54.5
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 2.3e-15 86.7 151 49.0
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 6.0e-11 72.0 113 43.4
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 1.7e-10 70.5 74 70.3


User provided reference genes

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