Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028601 Chenopodium quinoa HOM05D004016 ORTHO05D004732 2.3e-111 405.6 204 100.0
EL10Ac5g10544 Beta vulgaris HOM05D004016 ORTHO05D004732 4.0e-92 341.7 208 85.1
Ah.02g110900 Amaranthus hybridus HOM05D004016 ORTHO05D004732 1.6e-85 319.7 208 80.3
Hund02825 Selenicereus undatus HOM05D004016 ORTHO05D004732 3.8e-66 255.4 216 69.0
Hund27940 Selenicereus undatus HOM05D004016 ORTHO05D004732 1.4e-65 253.4 214 68.2
Sc05g0001440 Simmondsia chinensis HOM05D004016 ORTHO05D004732 6.4e-58 228.0 207 66.7
Sc17g0001350 Simmondsia chinensis HOM05D004016 ORTHO05D004732 3.3e-54 215.7 208 63.5
Solyc09g065380.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 2.2e-50 203.0 216 54.6
Sopen09g027150 Solanum pennellii HOM05D004016 ORTHO05D004732 2.9e-50 202.6 216 54.6
Hma1.2p1_0822F.1_g224340 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 4.2e-49 198.7 214 54.7
Lj2E1169T0 Lonicera japonica HOM05D004016 ORTHO05D004732 5.5e-49 198.4 217 56.2
Hma1.2p1_0667F.1_g199710 Hydrangea macrophylla HOM05D004016 ORTHO05D004732 1.2e-48 197.2 213 55.9
Manes.01G206100 Manihot esculenta HOM05D004016 ORTHO05D004732 2.1e-48 196.4 218 56.0
Dinv32914 Davidia involucrata HOM05D004016 ORTHO05D004732 2.7e-48 196.1 214 55.6
Manes.05G079900 Manihot esculenta HOM05D004016 ORTHO05D004732 4.6e-48 195.3 219 53.9
PGSC0003DMG400019358 Solanum tuberosum HOM05D004016 ORTHO05D004732 6.0e-48 194.9 216 54.2
Ciclev10022155m.g Citrus clementina HOM05D004016 ORTHO05D004732 3.0e-47 192.6 221 55.2
COL.COLO4_09066 Corchorus olitorius HOM05D004016 ORTHO05D004732 5.1e-47 191.8 217 55.3
MSTRG.21548 Avicennia marina HOM05D004016 ORTHO05D004732 1.1e-46 190.7 215 54.4
Potri.005G211400 Populus trichocarpa HOM05D004016 ORTHO05D004732 1.5e-46 190.3 221 54.8
Prupe.8G238400 Prunus persica HOM05D004016 ORTHO05D004732 3.3e-46 189.1 212 53.8
MD11G1282800 Malus domestica HOM05D004016 ORTHO05D004732 4.3e-46 188.7 213 54.0
Nitab4.5_0002928g0010 Nicotiana tabacum HOM05D004016 ORTHO05D004732 4.3e-46 188.7 206 51.5
MD03G1262100 Malus domestica HOM05D004016 ORTHO05D004732 7.4e-46 188.0 213 53.5
Cc01_g19290 Coffea canephora HOM05D004016 ORTHO05D004732 2.1e-45 186.4 223 53.4
TAR633G2817 Trochodendron aralioides HOM05D004016 ORTHO05D004732 2.1e-45 186.4 208 54.8
Migut.D00318 Erythranthe guttata HOM05D004016 ORTHO05D004732 2.8e-45 186.0 214 54.2
TWI18G0383 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 2.8e-45 186.0 214 54.7
Haze_04687 Corylus avellana HOM05D004016 ORTHO05D004732 8.2e-45 184.5 209 56.0
MSTRG.18246 Avicennia marina HOM05D004016 ORTHO05D004732 3.1e-44 182.6 218 50.5
Duzib138G0182 Durio zibethinus HOM05D004016 ORTHO05D004732 3.1e-44 182.6 214 52.8
vmacro14911 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 3.1e-44 182.6 209 53.1
Lj1C48T4 Lonicera japonica HOM05D004016 ORTHO05D004732 4.1e-44 182.2 207 54.1
Actinidia21126 Actinidia chinensis HOM05D004016 ORTHO05D004732 9.0e-44 181.0 212 53.8
Thecc.01G275600 Theobroma cacao HOM05D004016 ORTHO05D004732 9.0e-44 181.0 225 53.3
CAN.G1549.22 Capsicum annuum HOM05D004016 ORTHO05D004732 1.2e-43 180.6 216 52.3
CAN.G1549.11 Capsicum annuum HOM05D004016 ORTHO05D004732 1.5e-43 180.3 216 51.4
Cpa.g.sc487.4 Carica papaya HOM05D004016 ORTHO05D004732 1.5e-43 180.3 222 52.3
Cfa006163 Carpinus fangiana HOM05D004016 ORTHO05D004732 1.5e-43 180.3 209 54.5
RcHm_v2.0_Chr6g0290651 Rosa chinensis HOM05D004016 ORTHO05D004732 1.5e-43 180.3 226 51.3
Duzib133G1129 Durio zibethinus HOM05D004016 ORTHO05D004732 2.0e-43 179.9 212 53.3
TAR636G0684 Trochodendron aralioides HOM05D004016 ORTHO05D004732 2.0e-43 179.9 204 53.4
Gohir.A08G065500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 1.0e-42 177.6 214 54.7
Potri.002G050900 Populus trichocarpa HOM05D004016 ORTHO05D004732 2.2e-42 176.4 225 51.1
CAN.G1549.21 Capsicum annuum HOM05D004016 ORTHO05D004732 6.5e-42 174.9 216 51.4
Lsat_1_v5_gn_8_56660 Lactuca sativa HOM05D004016 ORTHO05D004732 1.9e-41 173.3 223 52.0
Rhsim01G0273500 Rhododendron simsii HOM05D004016 ORTHO05D004732 1.9e-41 173.3 210 52.9
Sabra05G0161500 Salix brachista HOM05D004016 ORTHO05D004732 2.5e-41 172.9 220 52.7
FvH4_2g23281 Fragaria vesca HOM05D004016 ORTHO05D004732 3.2e-41 172.6 213 51.2
FAN20G3152 Fragaria x ananassa HOM05D004016 ORTHO05D004732 4.2e-41 172.2 221 47.5
Sabra02G0041700 Salix brachista HOM05D004016 ORTHO05D004732 4.2e-41 172.2 224 52.7
Sopen06g035580 Solanum pennellii HOM05D004016 ORTHO05D004732 4.2e-41 172.2 215 47.0
FAN15G1959 Fragaria x ananassa HOM05D004016 ORTHO05D004732 5.5e-41 171.8 214 49.1
Atru.chr5.1471 Acer truncatum HOM05D004016 ORTHO05D004732 7.2e-41 171.4 225 49.8
Ca_09744_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 7.2e-41 171.4 211 51.2
FAN24G3262 Fragaria x ananassa HOM05D004016 ORTHO05D004732 1.6e-40 170.2 218 50.0
Gorai.004G078400 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.1e-40 169.9 220 51.8
TWI12G1445 Tripterygium wilfordii HOM05D004016 ORTHO05D004732 2.1e-40 169.9 211 51.2
Gohir.D08G074000 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.7e-40 169.5 220 51.8
Nitab4.5_0005172g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 2.7e-40 169.5 213 53.1
Nitab4.5_0008064g0020 Nicotiana tabacum HOM05D004016 ORTHO05D004732 4.6e-40 168.7 209 53.1
Solyc06g084200.2 Solanum lycopersicum HOM05D004016 ORTHO05D004732 6.1e-40 168.3 212 46.7
Lalb_Chr21g0306401 Lupinus albus HOM05D004016 ORTHO05D004732 7.9e-40 167.9 210 51.9
HanXRQChr04g0118991 Helianthus annuus HOM05D004016 ORTHO05D004732 1.3e-39 167.2 223 50.7
Peaxi162Scf00783g00017 Petunia axillaris HOM05D004016 ORTHO05D004732 1.3e-39 167.2 218 50.9
Aqoxy5G00450 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 1.8e-39 166.8 207 52.2
THA.LOC104801244 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 1.8e-39 166.8 212 50.9
FAN27G2694 Fragaria x ananassa HOM05D004016 ORTHO05D004732 2.3e-39 166.4 215 49.3
ClCG07G000350 Citrullus lanatus HOM05D004016 ORTHO05D004732 3.0e-39 166.0 208 52.9
Phvul.007G173300 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 3.0e-39 166.0 213 51.2
Oeu040656.1 Olea europaea HOM05D004016 ORTHO05D004732 3.9e-39 165.6 215 50.7
PGSC0003DMG400020056 Solanum tuberosum HOM05D004016 ORTHO05D004732 3.9e-39 165.6 215 45.6
Eucgr.H01463 Eucalyptus grandis HOM05D004016 ORTHO05D004732 5.1e-39 165.2 216 50.9
Oeu025739.1 Olea europaea HOM05D004016 ORTHO05D004732 5.1e-39 165.2 213 51.6
Glyma.02G146200 Glycine max HOM05D004016 ORTHO05D004732 6.7e-39 164.9 217 51.2
Oeu028065.1 Olea europaea HOM05D004016 ORTHO05D004732 8.7e-39 164.5 222 50.5
Ca_08613_v3 Cicer arietinum L. HOM05D004016 ORTHO05D004732 1.5e-38 163.7 209 49.8
CsaV3_6G037200 Cucumis sativus L. HOM05D004016 ORTHO05D004732 2.5e-38 162.9 213 50.7
Lalb_Chr02g0142631 Lupinus albus HOM05D004016 ORTHO05D004732 2.5e-38 162.9 209 50.7
Psat3g063280 Pisum sativum HOM05D004016 ORTHO05D004732 2.5e-38 162.9 207 48.8
Peaxi162Scf01248g00010 Petunia axillaris HOM05D004016 ORTHO05D004732 3.3e-38 162.5 207 51.2
THA.LOC104825992 Tarenaya hassleriana HOM05D004016 ORTHO05D004732 3.3e-38 162.5 218 50.9
Sp6g02620 Schrenkiella parvula HOM05D004016 ORTHO05D004732 4.3e-38 162.2 211 48.3
Aa31LG5G2350 Aethionema arabicum HOM05D004016 ORTHO05D004732 5.7e-38 161.8 214 47.7
Lalb_Chr06g0162891 Lupinus albus HOM05D004016 ORTHO05D004732 9.7e-38 161.0 209 50.2
Glyma.10G027800 Glycine max HOM05D004016 ORTHO05D004732 1.3e-37 160.6 220 51.4
Migut.N02038 Erythranthe guttata HOM05D004016 ORTHO05D004732 2.2e-37 159.8 213 46.5
Gorai.004G216600 Gossypium raimondii HOM05D004016 ORTHO05D004732 3.7e-37 159.1 213 47.9
Lj1g0004863 Lotus japonicus HOM05D004016 ORTHO05D004732 4.8e-37 158.7 217 46.5
LjContig00056g0010505 Lotus japonicus HOM05D004016 ORTHO05D004732 4.8e-37 158.7 217 46.5
arahy.Tifrunner.gnm1.ann1.256EAD Arachis hypogaea HOM05D004016 ORTHO05D004732 6.3e-37 158.3 211 48.8
Gohir.D08G204600 Gossypium hirsutum HOM05D004016 ORTHO05D004732 6.3e-37 158.3 209 48.8
CARHR251020 Cardamine hirsuta HOM05D004016 ORTHO05D004732 1.4e-36 157.1 208 45.7
Thhalv10028968m.g Eutrema salsugineum HOM05D004016 ORTHO05D004732 1.4e-36 157.1 212 46.7
Gorai.007G138300 Gossypium raimondii HOM05D004016 ORTHO05D004732 1.8e-36 156.8 214 49.5
Nitab4.5_0009529g0030 Nicotiana tabacum HOM05D004016 ORTHO05D004732 1.8e-36 156.8 179 49.2
Gohir.A11G124100 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.4e-36 156.4 219 47.5
Gohir.D11G129300 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.4e-36 156.4 212 49.1
Medtr7g095160 Medicago truncatula HOM05D004016 ORTHO05D004732 1.2e-35 154.1 203 49.3
DCAR_018429 Daucus carota HOM05D004016 ORTHO05D004732 1.5e-35 153.7 239 43.5
Gohir.A08G186500 Gossypium hirsutum HOM05D004016 ORTHO05D004732 2.6e-35 152.9 209 48.3
Sed0007164 Sechium edule HOM05D004016 ORTHO05D004732 4.5e-35 152.1 214 48.6
AL6G50300 Arabidopsis lyrata HOM05D004016 ORTHO05D004732 1.7e-34 150.2 208 46.6
AT4G02715 Arabidopsis thaliana HOM05D004016 ORTHO05D004732 2.2e-34 149.8 208 45.7
BcaB05g23659 Brassica carinata HOM05D004016 ORTHO05D004732 2.2e-34 149.8 210 46.7
QL12p021105 Quercus lobata HOM05D004016 ORTHO05D004732 2.2e-34 149.8 237 45.6
Carub.0006s3440 Capsella rubella HOM05D004016 ORTHO05D004732 2.9e-34 149.4 208 45.2
Actinidia24906 Actinidia chinensis HOM05D004016 ORTHO05D004732 5.0e-34 148.7 171 52.0
MELO3C014394.2 Cucumis melo HOM05D004016 ORTHO05D004732 8.5e-34 147.9 213 46.9
MSTRG.17454 Avicennia marina HOM05D004016 ORTHO05D004732 1.1e-33 147.5 212 46.2
VMungo0720G0880 Vigna mungo HOM05D004016 ORTHO05D004732 3.2e-33 146.0 190 49.5
SGA_v2.0_scaffold138G35322 Striga asiatica HOM05D004016 ORTHO05D004732 4.2e-33 145.6 185 49.2
TPR.G24294 Trifolium pratense HOM05D004016 ORTHO05D004732 5.5e-33 145.2 215 45.6
SGA_v2.0_scaffold1G00497 Striga asiatica HOM05D004016 ORTHO05D004732 9.4e-33 144.4 252 42.1
Glyma.03G155700 Glycine max HOM05D004016 ORTHO05D004732 1.6e-32 143.7 213 46.5
Lj5g0005099 Lotus japonicus HOM05D004016 ORTHO05D004732 1.6e-32 143.7 217 47.5
DCAR_002723 Daucus carota HOM05D004016 ORTHO05D004732 2.1e-32 143.3 221 46.2
CiPaw.08G107200 Carya illinoinensis HOM05D004016 ORTHO05D004732 3.6e-32 142.5 180 50.6
PGR044G0005 Punica granatum HOM05D004016 ORTHO05D004732 4.6e-32 142.1 217 47.9
Glyma.19G157800 Glycine max HOM05D004016 ORTHO05D004732 7.9e-32 141.4 210 46.2
BcaB01g02015 Brassica carinata HOM05D004016 ORTHO05D004732 2.3e-31 139.8 214 45.8
VMungo1383G1854 Vigna mungo HOM05D004016 ORTHO05D004732 2.3e-31 139.8 215 46.5
TPR.G27140 Trifolium pratense HOM05D004016 ORTHO05D004732 3.9e-31 139.0 208 46.2
Phvul.001G153100 Phaseolus vulgaris HOM05D004016 ORTHO05D004732 6.7e-31 138.3 214 45.3
ECA236G1435 Erigeron canadensis HOM05D004016 ORTHO05D004732 2.0e-30 136.7 210 46.7
C09p02200 Brassica napus HOM05D004016 ORTHO05D004732 3.3e-30 136.0 203 44.8
BcaC04g24008 Brassica carinata HOM05D004016 ORTHO05D004732 4.8e-29 132.1 208 44.7
BolC9t53149H Brassica oleracea HOM05D004016 ORTHO05D004732 4.8e-29 132.1 208 44.7
Aqoxy2G03410 Aquilegia oxysepala HOM05D004016 ORTHO05D004732 8.2e-29 131.3 206 43.7
vmacro02591 Vaccinium macrocarpon HOM05D004016 ORTHO05D004732 8.2e-29 131.3 212 43.4
Psat6g059840 Pisum sativum HOM05D004016 ORTHO05D004732 3.1e-28 129.4 199 44.2
BcaC03g16166 Brassica carinata HOM05D004016 ORTHO05D004732 2.0e-27 126.7 210 43.3
C02p39140 Brassica napus HOM05D004016 ORTHO05D004732 3.4e-27 125.9 210 44.3
A09p02110 Brassica napus HOM05D004016 ORTHO05D004732 1.7e-26 123.6 206 41.7
PSO761G0274 Papaver somniferum HOM05D004016 ORTHO05D004732 1.7e-26 123.6 222 44.6
BraA09t35860Z Brassica rapa HOM05D004016 ORTHO05D004732 5.0e-26 122.1 206 41.7
ClCG09G007200 Citrullus lanatus HOM05D004016 ORTHO05D004732 5.0e-26 122.1 211 44.5
Rhsim13G0026600 Rhododendron simsii HOM05D004016 ORTHO05D004732 5.0e-26 122.1 212 42.0
HPP92_013967 Vanilla planifolia HOM05D004016 ORTHO05D004732 6.5e-26 121.7 205 41.5
unitig_0.g129 Utricularia gibba HOM05D004016 ORTHO05D004732 9.4e-25 117.9 152 52.0
BolC2t09924H Brassica oleracea HOM05D004016 ORTHO05D004732 2.1e-24 116.7 203 43.3
PSO210G5515 Papaver somniferum HOM05D004016 ORTHO05D004732 1.8e-23 113.6 222 41.9
Os03g0160200 Oryza sativa ssp. japonica HOM05D004016 ORTHO05D004732 2.0e-22 110.2 213 42.3
Oeu013891.1 Olea europaea HOM05D004016 ORTHO05D004732 3.3e-22 109.4 172 44.8
Medtr1g071810 Medicago truncatula HOM05D004016 ORTHO05D004732 1.1e-20 104.4 89 61.8
ATR0697G155 Amborella trichopoda HOM05D004016 ORTHO05D004732 1.8e-20 103.6 132 49.2
Zm00001eb403300 Zea mays HOM05D004016 ORTHO05D004732 3.1e-20 102.8 212 39.2
Oeu034146.1 Olea europaea HOM05D004016 ORTHO05D004732 9.1e-20 101.3 181 41.4
ECA247G1708 Erigeron canadensis HOM05D004016 ORTHO05D004732 1.6e-19 100.5 182 40.1
Psat1g067520 Pisum sativum HOM05D004016 ORTHO05D004732 3.5e-19 99.4 182 40.7
CsaV3_7G027970 Cucumis sativus L. HOM05D004016 ORTHO05D004732 7.7e-19 98.2 210 39.0
BraA02t07483Z Brassica rapa HOM05D004016 ORTHO05D004732 1.1e-17 94.4 194 40.7
A02p24930 Brassica napus HOM05D004016 ORTHO05D004732 4.2e-17 92.4 194 40.2
MELO3C015815.2 Cucumis melo HOM05D004016 ORTHO05D004732 5.5e-17 92.0 210 39.5
Zm00001eb047890 Zea mays HOM05D004016 ORTHO05D004732 9.4e-17 91.3 167 40.7
Gorai.009G456000 Gossypium raimondii HOM05D004016 ORTHO05D004732 2.2e-13 80.1 135 43.7
A03p30890 Brassica napus HOM05D004016 ORTHO05D004732 1.4e-12 77.4 88 51.1
VMungo1383G2032 Vigna mungo HOM05D004016 ORTHO05D004732 1.8e-12 77.0 60 66.7
Sed0001131 Sechium edule HOM05D004016 ORTHO05D004732 2.4e-12 76.6 210 34.8
GSVIVG01001172001 Vitis vinifera HOM05D004016 ORTHO05D004732 2.7e-11 73.2 64 59.4
SEGI_39625 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 3.8e-10 69.3 111 44.1
BcaC01g06738 Brassica carinata HOM05D004016 ORTHO05D004732 3.2e-09 66.2 50 60.0
Nn4g22231 Nelumbo nucifera HOM05D004016 ORTHO05D004732 5.5e-09 65.5 70 58.6
BcaC01g06736 Brassica carinata HOM05D002144 ORTHO05D002170 9.4e-09 64.7 83 48.2
Mapoly0128s0012 Marchantia polymorpha HOM05D004016 ORTHO05D004732 3.6e-08 62.8 105 46.7
SEGI_04941 Sequoiadendron giganteum HOM05D004016 ORTHO05D004732 3.6e-08 62.8 84 46.4
VMungo0540G2292 Vigna mungo HOM05D004016 ORTHO05D004732 3.4e-06 56.2 35 74.3
SMO347G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 4.4e-06 55.8 85 37.6
SMO134G0037 Selaginella moellendorffii HOM05D004016 ORTHO05D004732 9.8e-06 54.7 83 47.0


User provided reference genes

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