Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 0.0e+00 1449.9 792 100.0
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 0.0e+00 1229.9 784 80.5
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 1.2e-189 667.5 834 53.1
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 6.2e-133 479.2 806 42.2
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 9.8e-78 295.8 822 37.3
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 1.4e-71 275.4 820 34.9
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 4.0e-71 273.9 822 35.3
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 2.0e-70 271.6 820 33.4
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 5.6e-65 253.4 821 33.9
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 7.3e-65 253.1 825 33.8
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 1.2e-64 252.3 818 36.4
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 4.7e-64 250.4 820 35.0
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 5.2e-63 246.9 818 31.2
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 6.8e-63 246.5 840 31.3
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 2.0e-62 245.0 822 34.2
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 3.4e-62 244.2 797 28.4
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 5.8e-62 243.4 800 32.5
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 9.8e-62 242.7 813 33.9
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 6.4e-61 240.0 813 33.6
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 6.4e-61 240.0 818 30.7
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 3.2e-60 237.7 850 30.7
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 7.8e-59 233.0 819 29.8
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 3.6e-56 224.2 816 27.8
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 3.6e-56 224.2 817 29.6
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 1.2e-54 219.2 813 32.3
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 2.0e-54 218.4 811 33.8
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 1.1e-52 212.6 805 34.2
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 3.2e-52 211.1 814 27.4
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 3.5e-51 207.6 849 32.5
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 3.0e-50 204.5 810 27.0
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 5.0e-50 203.8 822 29.4
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 6.6e-50 203.4 833 27.6
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 9.5e-49 199.5 831 28.8
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 1.6e-48 198.7 818 29.8
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.4e-47 195.7 827 26.2
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 5.2e-47 193.7 828 28.5
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.2e-46 192.6 828 28.5
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 4.9e-45 187.2 841 30.3
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 4.9e-45 187.2 831 26.8
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 1.1e-44 186.0 813 30.6
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 1.1e-44 186.0 816 30.0
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 1.4e-44 185.7 852 25.9
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.6e-43 182.2 824 26.2
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 7.8e-43 179.9 802 26.8
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 4.3e-41 174.1 820 29.5
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 1.7e-37 162.2 804 27.5
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 8.7e-34 149.8 800 26.6
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 4.3e-33 147.5 824 25.0
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 1.1e-31 142.9 720 28.3
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 1.8e-31 142.1 213 40.4
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 3.4e-30 137.9 810 25.3
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 8.4e-29 133.3 832 29.4
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 1.1e-28 132.9 274 32.1
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 1.1e-25 122.9 798 24.1
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 9.6e-25 119.8 805 29.3
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 1.5e-22 112.5 647 24.0
ECA233G4923 Erigeron canadensis HOM05D008222 ORTHO05D010364 3.8e-21 107.8 778 25.6
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 4.6e-19 100.9 251 32.3
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 6.0e-19 100.5 803 25.4
Lalb_Chr02g0154681 Lupinus albus HOM05D008222 ORTHO05D010364 8.1e-16 90.1 173 36.4
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 6.7e-10 70.5 85 41.2


User provided reference genes

Program Settings