Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 4.6e-137 491.5 301 100.0
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 1.0e-96 357.5 330 72.4
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 1.6e-73 280.4 191 95.8
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 1.1e-48 198.0 153 94.8
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 7.1e-37 158.7 156 71.8
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 1.7e-35 154.1 160 73.1
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 7.6e-31 138.7 89 73.0
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 1.3e-30 137.9 89 73.0
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 1.7e-30 137.5 166 67.5
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 1.7e-30 137.5 166 68.1
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 2.2e-30 137.1 166 62.7
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 2.9e-30 136.7 89 75.3
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 2.9e-30 136.7 166 69.3
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 3.8e-30 136.3 157 51.0
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 4.9e-30 136.0 89 71.9
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 4.9e-30 136.0 89 74.2
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 6.4e-30 135.6 89 73.0
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 8.4e-30 135.2 89 74.2
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 1.1e-29 134.8 86 76.7
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 1.1e-29 134.8 89 76.4
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 1.4e-29 134.4 89 73.0
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 1.9e-29 134.0 89 70.8
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 1.9e-29 134.0 87 75.9
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 1.9e-29 134.0 89 70.8
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 1.9e-29 134.0 89 73.0
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 2.4e-29 133.7 89 71.9
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 3.2e-29 133.3 89 70.8
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 3.2e-29 133.3 88 71.6
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 3.2e-29 133.3 88 70.5
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 4.2e-29 132.9 89 70.8
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 4.2e-29 132.9 166 67.5
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 4.2e-29 132.9 166 67.5
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 4.2e-29 132.9 86 73.3
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 4.2e-29 132.9 89 70.8
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 4.2e-29 132.9 88 73.9
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 4.2e-29 132.9 83 77.1
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 5.4e-29 132.5 86 74.4
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 5.4e-29 132.5 87 72.4
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 5.4e-29 132.5 87 72.4
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 7.1e-29 132.1 87 72.4
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 7.1e-29 132.1 86 75.6
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 7.1e-29 132.1 89 71.9
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 7.1e-29 132.1 88 73.9
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 7.1e-29 132.1 166 67.5
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 9.3e-29 131.7 89 71.9
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 9.3e-29 131.7 89 71.9
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 9.3e-29 131.7 90 72.2
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 1.2e-28 131.3 89 69.7
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 1.2e-28 131.3 87 73.6
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.2e-28 131.3 87 73.6
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 1.2e-28 131.3 89 70.8
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 1.2e-28 131.3 89 71.9
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 1.6e-28 131.0 83 75.9
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 1.6e-28 131.0 89 73.0
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.6e-28 131.0 89 73.0
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.1e-28 130.6 88 70.5
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 2.1e-28 130.6 88 70.5
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 2.1e-28 130.6 89 69.7
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 2.1e-28 130.6 166 69.3
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 2.7e-28 130.2 89 67.4
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 2.7e-28 130.2 89 70.8
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 2.7e-28 130.2 87 72.4
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 3.5e-28 129.8 89 70.8
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 3.5e-28 129.8 89 69.7
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 4.6e-28 129.4 90 72.2
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 4.6e-28 129.4 88 68.2
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 4.6e-28 129.4 89 68.5
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 6.0e-28 129.0 86 70.9
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 1.0e-27 128.3 88 70.5
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 1.0e-27 128.3 87 70.1
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 1.0e-27 128.3 154 72.7
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 1.3e-27 127.9 90 71.1
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 1.3e-27 127.9 90 71.1
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 1.3e-27 127.9 87 69.0
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 1.3e-27 127.9 87 71.3
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 1.3e-27 127.9 83 72.3
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 1.7e-27 127.5 87 69.0
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 1.7e-27 127.5 87 70.1
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 1.7e-27 127.5 87 70.1
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 3.9e-27 126.3 88 68.2
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 3.9e-27 126.3 86 72.1
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 3.9e-27 126.3 86 70.9
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 3.9e-27 126.3 83 72.3
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 3.9e-27 126.3 87 67.8
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 3.9e-27 126.3 86 69.8
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 1.1e-26 124.8 87 70.1
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 1.5e-26 124.4 87 66.7
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 1.5e-26 124.4 87 66.7
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 1.9e-26 124.0 87 69.0
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 1.9e-26 124.0 88 68.2
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 3.3e-26 123.2 77 74.0
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 3.3e-26 123.2 86 69.8
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 4.3e-26 122.9 85 70.6
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 7.3e-26 122.1 88 67.0
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 7.3e-26 122.1 86 68.6
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 1.3e-25 121.3 82 72.0
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 2.1e-25 120.6 80 71.2
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 2.8e-25 120.2 120 52.5
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 3.1e-24 116.7 89 60.7
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 1.2e-23 114.8 76 71.1
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 1.3e-22 111.3 89 58.4
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 6.4e-22 109.0 75 68.0
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 1.1e-21 108.2 77 63.6
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 2.4e-21 107.1 89 60.7
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 7.1e-21 105.5 96 59.4
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 1.8e-19 100.9 91 57.1
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 2.8e-17 93.6 118 65.3
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 4.8e-17 92.8 117 76.9
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 8.1e-17 92.0 82 61.0
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 4.0e-16 89.7 52 76.9
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 6.9e-16 89.0 89 55.1
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 2.9e-14 83.6 52 73.1
AUR62041429 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-13 81.6 92 56.5
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 8.2e-09 65.5 37 75.7
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 9.0e-08 62.0 82 40.2
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 1.0e-06 58.5 127 34.6


User provided reference genes

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