Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028446 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.1e-107 393.3 200 100.0
AUR62006471 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.6e-80 302.4 191 82.7
AUR62036837 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.2e-66 256.1 202 67.3
AUR62022712 Chenopodium quinoa HOM05D009343 ORTHO05D000385 3.7e-66 255.4 174 75.9
AUR62002779 Chenopodium quinoa HOM05D009343 ORTHO05D000385 2.1e-61 239.6 175 72.0
AUR62043436 Chenopodium quinoa HOM05D009343 ORTHO05D000385 7.2e-54 214.5 208 59.6
AUR62037194 Chenopodium quinoa HOM05D009343 ORTHO05D011970 6.8e-52 208.0 240 53.8
AUR62036502 Chenopodium quinoa HOM05D009343 ORTHO05D011970 3.8e-47 192.2 132 75.8
AUR62042872 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.9e-39 166.0 144 68.8
AUR62022305 Chenopodium quinoa HOM05D009343 ORTHO05D000385 4.3e-38 162.2 114 71.1
AUR62018144 Chenopodium quinoa HOM05D009343 ORTHO05D011970 9.5e-38 161.0 145 66.9
AUR62040734 Chenopodium quinoa HOM05D009343 ORTHO05D011970 8.0e-37 157.9 144 66.7
AUR62041534 Chenopodium quinoa HOM05D009343 ORTHO05D011970 1.2e-35 154.1 177 54.2
AUR62032537 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.5e-30 136.3 91 68.1
AUR62037174 Chenopodium quinoa HOM05D009343 ORTHO05D000385 2.5e-30 136.3 91 68.1
AUR62031112 Chenopodium quinoa HOM05D009343 ORTHO05D000385 5.6e-30 135.2 167 47.3
AUR62002100 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.8e-29 132.9 106 61.3
AUR62038476 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.8e-29 132.9 136 57.4
AUR62037805 Chenopodium quinoa HOM05D009343 ORTHO05D011970 3.6e-29 132.5 144 56.9
AUR62041985 Chenopodium quinoa HOM05D009343 ORTHO05D011970 2.6e-27 126.3 149 56.4
AUR62039813 Chenopodium quinoa HOM05D009343 ORTHO05D011970 5.2e-20 102.1 105 51.4
EL10Ac1g01843 Beta vulgaris HOM05D009343 ORTHO05D011970 1.5e-19 100.5 92 58.7
EL10Ac9g22741 Beta vulgaris HOM05D009343 ORTHO05D011970 2.6e-19 99.8 92 58.7
Psat7g143560 Pisum sativum HOM05D008859 ORTHO05D000385 1.2e-11 74.3 75 45.3
Sc07g0005190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.5e-11 73.9 132 34.1
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 2.0e-11 73.6 79 40.5
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 2.6e-11 73.2 74 37.8
Hund01438 Selenicereus undatus HOM05D004615 ORTHO05D000385 2.6e-11 73.2 77 41.6
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 1.3e-10 70.9 121 35.5
AUR62042512 Chenopodium quinoa HOM05D014060 ORTHO05D000385 1.7e-10 70.5 83 43.4
Psat5g250640 Pisum sativum HOM05D008859 ORTHO05D007166 1.7e-10 70.5 79 43.0
Sc07g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.7e-10 70.5 74 44.6
AUR62024348 Chenopodium quinoa HOM05D014060 ORTHO05D000385 3.8e-10 69.3 79 44.3
Hund13368 Selenicereus undatus HOM05D009682 ORTHO05D000385 3.8e-10 69.3 74 39.2
Sc08g0005540 Simmondsia chinensis HOM05D004615 ORTHO05D000385 3.8e-10 69.3 71 42.3
Hund07865 Selenicereus undatus HOM05D009682 ORTHO05D000385 4.9e-10 68.9 67 44.8
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 4.9e-10 68.9 121 33.1
AUR62014955 Chenopodium quinoa HOM05D008127 ORTHO05D000385 6.4e-10 68.6 71 45.1
AUR62027608 Chenopodium quinoa HOM05D014060 ORTHO05D000385 6.4e-10 68.6 71 45.1
Psat0s130g0040 Pisum sativum HOM05D008859 ORTHO05D000385 8.4e-10 68.2 88 38.6
Psat0s776g0040 Pisum sativum HOM05D004615 ORTHO05D000385 8.4e-10 68.2 74 35.1
SGA_v2.0_scaffold528G52732 Striga asiatica HOM05D004615 ORTHO05D000385 8.4e-10 68.2 83 38.6
Psat5g082920 Pisum sativum HOM05D008859 ORTHO05D000385 1.1e-09 67.8 78 41.0
AUR62035731 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.4e-09 67.4 84 44.0
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 1.4e-09 67.4 126 34.9
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 1.9e-09 67.0 79 36.7
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 1.9e-09 67.0 121 33.9
AUR62005789 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.4e-09 66.6 71 47.9
AUR62040424 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.4e-09 66.6 71 47.9
Hund24527 Selenicereus undatus HOM05D009682 ORTHO05D000385 2.4e-09 66.6 67 44.8
Lj4g0021021 Lotus japonicus HOM05D004615 ORTHO05D000385 3.2e-09 66.2 77 39.0
EL10Ac7g17658 Beta vulgaris HOM05D004615 ORTHO05D000385 4.1e-09 65.9 68 47.1
AUR62041916 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.1e-09 65.9 71 46.5
Medtr5g061300 Medicago truncatula HOM05D004615 ORTHO05D000385 4.1e-09 65.9 74 33.8
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 4.1e-09 65.9 126 34.9
AUR62027663 Chenopodium quinoa HOM05D014060 ORTHO05D000385 5.4e-09 65.5 71 43.7
Sc06g0003990 Simmondsia chinensis HOM05D004615 ORTHO05D000385 5.4e-09 65.5 70 44.3
TPR.G13785 Trifolium pratense HOM05D004615 ORTHO05D000385 5.4e-09 65.5 67 46.3
Ca_22878_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 7.1e-09 65.1 172 27.3
EL10Ac1g01142 Beta vulgaris HOM05D004615 ORTHO05D000385 9.2e-09 64.7 68 47.1
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 9.2e-09 64.7 68 47.1
AUR62026468 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.2e-09 64.7 76 39.5
AUR62037964 Chenopodium quinoa HOM05D014060 ORTHO05D000385 9.2e-09 64.7 83 41.0
AUR62004861 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.2e-08 64.3 71 43.7
Sc22g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.2e-08 64.3 100 37.0
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.6e-08 63.9 71 45.1
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 1.6e-08 63.9 126 34.1
Hund03863 Selenicereus undatus HOM05D009682 ORTHO05D000385 2.7e-08 63.2 109 34.9
AUR62040355 Chenopodium quinoa HOM05D014060 ORTHO05D000385 3.5e-08 62.8 64 45.3
AUR62029474 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.6e-08 62.4 59 47.5
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 4.6e-08 62.4 81 37.0
Hund24524 Selenicereus undatus HOM05D009682 ORTHO05D000385 6.0e-08 62.0 107 34.6
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.8e-08 61.6 71 45.1
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.8e-08 61.6 59 47.5
PGSC0003DMG400046273 Solanum tuberosum HOM05D008041 ORTHO05D000385 7.8e-08 61.6 67 47.8
AUR62030145 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.0e-07 61.2 71 45.1
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-07 60.8 75 36.0
Medtr7g027580 Medicago truncatula HOM05D010482 ORTHO05D000385 1.3e-07 60.8 75 41.3
SGA_v2.0_scaffold39G15343 Striga asiatica HOM05D004615 ORTHO05D000385 1.7e-07 60.5 127 29.1
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.7e-07 60.5 73 38.4
AUR62030655 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.3e-07 60.1 59 45.8
AUR62035941 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.3e-07 60.1 59 45.8
ECA234G1533 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.3e-07 60.1 61 45.9
Sc20g0003820 Simmondsia chinensis HOM05D004615 ORTHO05D000385 2.3e-07 60.1 74 39.2
SGA_v2.0_scaffold623G53232 Striga asiatica HOM05D004615 ORTHO05D000385 2.3e-07 60.1 71 40.8
EL10Ac2g02894 Beta vulgaris HOM05D004615 ORTHO05D000385 3.0e-07 59.7 156 32.1
CAN.G637.27 Capsicum annuum HOM05D000229 ORTHO05D000385 3.0e-07 59.7 74 41.9
Sc03g0005370 Simmondsia chinensis HOM05D009343 ORTHO05D000385 3.0e-07 59.7 77 36.4
HanXRQChr04g0100871 Helianthus annuus HOM05D004615 ORTHO05D000385 3.9e-07 59.3 74 41.9
MBI15_g37112_MAGBIO Magnolia biondii HOM05D000308 ORTHO05D000194 3.9e-07 59.3 75 37.3
Ah.02g122150 Amaranthus hybridus HOM05D004615 ORTHO05D000385 5.1e-07 58.9 74 43.2
AUR62031351 Chenopodium quinoa HOM05D014060 ORTHO05D000385 5.1e-07 58.9 83 39.8
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 5.1e-07 58.9 120 31.7
SGA_v2.0_scaffold11G05529 Striga asiatica HOM05D004615 ORTHO05D000385 6.6e-07 58.5 71 39.4
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 8.7e-07 58.2 142 27.5
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.7e-07 58.2 80 38.8
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 8.7e-07 58.2 68 45.6
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 8.7e-07 58.2 68 45.6
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 8.7e-07 58.2 68 45.6
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 8.7e-07 58.2 68 45.6
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 8.7e-07 58.2 68 45.6
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 1.1e-06 57.8 203 25.6
AUR62026239 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.5e-06 57.4 79 38.0
SGA_v2.0_scaffold279G46788 Striga asiatica HOM05D004615 ORTHO05D000385 1.5e-06 57.4 93 34.4
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 1.9e-06 57.0 69 42.0
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 1.9e-06 57.0 137 33.6
AUR62018288 Chenopodium quinoa HOM05D004615 ORTHO05D000062 1.9e-06 57.0 141 32.6
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-06 57.0 75 37.3
Sc11g0005200 Simmondsia chinensis HOM05D014970 ORTHO05D019369 1.9e-06 57.0 62 41.9
Solyc09g014641.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 1.9e-06 57.0 68 44.1
arahy.Tifrunner.gnm1.ann1.HKAM97 Arachis hypogaea HOM05D010482 ORTHO05D000385 2.5e-06 56.6 69 42.0
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 2.5e-06 56.6 137 32.8
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 2.5e-06 56.6 137 32.8
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 2.5e-06 56.6 137 32.8
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.5e-06 56.6 121 29.8
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 2.5e-06 56.6 61 45.9
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 2.5e-06 56.6 61 45.9
arahy.Tifrunner.gnm1.ann1.U7U33W Arachis hypogaea HOM05D010482 ORTHO05D000385 3.3e-06 56.2 69 42.0
AUR62035483 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.3e-06 56.2 121 35.5
AUR62042034 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.3e-06 56.2 59 42.4
Hund12189 Selenicereus undatus HOM05D004615 ORTHO05D000385 3.3e-06 56.2 156 29.5
AUR62031149 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.3e-06 55.8 79 39.2
arahy.Tifrunner.gnm1.ann1.U4Z5MQ Arachis hypogaea HOM05D010482 ORTHO05D000385 5.6e-06 55.5 108 35.2
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.6e-06 55.5 227 27.8
AUR62035411 Chenopodium quinoa HOM05D009343 ORTHO05D011970 5.6e-06 55.5 81 48.1
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 5.6e-06 55.5 68 44.1
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 7.3e-06 55.1 69 40.6
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 7.3e-06 55.1 119 29.4
AUR62038216 Chenopodium quinoa HOM05D004615 ORTHO05D000385 9.6e-06 54.7 52 46.2
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 9.6e-06 54.7 119 30.3
Solyc01g034040.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 9.6e-06 54.7 68 44.1
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 9.6e-06 54.7 62 45.2


User provided reference genes

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