Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 3.2e-85 318.5 179 100.0
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 5.8e-79 297.7 179 92.7
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 2.5e-66 255.8 179 81.0
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 6.3e-49 198.0 183 63.9
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 4.1e-48 195.3 181 65.2
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 9.0e-48 194.1 181 65.2
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 1.2e-47 193.7 182 66.5
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 3.4e-47 192.2 181 63.5
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 4.5e-47 191.8 182 62.6
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 4.5e-47 191.8 183 64.5
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 1.0e-46 190.7 182 63.2
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.3e-46 190.3 182 64.8
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 1.3e-46 190.3 182 64.8
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 2.2e-46 189.5 181 62.4
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 2.9e-46 189.1 182 62.6
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 3.8e-46 188.7 181 62.4
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 3.8e-46 188.7 181 64.6
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.8e-46 188.7 181 64.6
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 8.5e-46 187.6 180 61.1
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 1.1e-45 187.2 187 58.8
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 1.1e-45 187.2 182 62.6
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.4e-45 186.8 186 62.4
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 2.5e-45 186.0 183 61.7
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 2.5e-45 186.0 181 61.9
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 2.5e-45 186.0 184 60.9
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 3.2e-45 185.7 180 65.6
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 3.2e-45 185.7 180 62.8
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 3.2e-45 185.7 182 62.1
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 7.2e-45 184.5 185 63.8
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 7.2e-45 184.5 187 57.8
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 7.2e-45 184.5 182 61.0
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 9.4e-45 184.1 181 61.9
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.2e-44 183.7 181 61.9
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.2e-44 183.7 183 62.8
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 1.2e-44 183.7 181 61.9
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 2.1e-44 183.0 183 61.7
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 2.7e-44 182.6 181 61.9
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.6e-44 182.2 182 61.0
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 3.6e-44 182.2 183 61.7
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 4.6e-44 181.8 179 63.1
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 6.1e-44 181.4 183 60.7
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 6.1e-44 181.4 181 61.3
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 6.1e-44 181.4 184 59.8
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 6.1e-44 181.4 183 61.7
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 7.9e-44 181.0 180 61.7
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 7.9e-44 181.0 184 59.8
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 7.9e-44 181.0 188 60.6
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.0e-43 180.6 179 63.1
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 1.4e-43 180.3 185 61.6
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 1.4e-43 180.3 181 59.1
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.4e-43 180.3 180 62.8
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 1.8e-43 179.9 183 60.1
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.8e-43 179.9 181 59.7
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 2.3e-43 179.5 169 63.9
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 3.0e-43 179.1 149 70.5
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 3.9e-43 178.7 133 69.2
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 5.1e-43 178.3 181 61.9
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 5.1e-43 178.3 179 61.5
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 6.7e-43 177.9 183 60.7
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 6.7e-43 177.9 182 61.0
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.1e-42 177.2 183 60.7
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 1.1e-42 177.2 181 60.8
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 1.5e-42 176.8 183 61.7
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 1.5e-42 176.8 179 60.9
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 1.5e-42 176.8 185 60.5
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 1.5e-42 176.8 182 59.9
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.5e-42 176.8 181 61.3
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 1.5e-42 176.8 181 62.4
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 2.5e-42 176.0 114 79.8
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 2.5e-42 176.0 179 59.8
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 4.3e-42 175.3 183 59.0
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 4.3e-42 175.3 177 61.6
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 5.7e-42 174.9 181 59.1
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 7.4e-42 174.5 117 75.2
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 9.7e-42 174.1 110 80.0
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.3e-41 173.7 178 59.6
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.3e-41 173.7 124 73.4
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 1.3e-41 173.7 182 60.4
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.7e-41 173.3 123 71.5
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 1.7e-41 173.3 170 63.5
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.7e-41 173.3 179 62.0
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 4.8e-41 171.8 185 58.9
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 4.8e-41 171.8 183 61.2
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 4.8e-41 171.8 155 65.8
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 6.3e-41 171.4 180 61.1
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 1.1e-40 170.6 180 60.6
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 1.4e-40 170.2 177 59.3
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 1.4e-40 170.2 177 59.3
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.4e-40 170.2 103 83.5
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 4.1e-40 168.7 175 61.1
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 5.3e-40 168.3 169 59.2
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 5.3e-40 168.3 182 57.1
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 6.9e-40 167.9 173 57.8
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 6.9e-40 167.9 178 57.9
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 9.1e-40 167.5 171 59.1
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.5e-39 166.8 179 56.4
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 2.0e-39 166.4 168 59.5
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 2.6e-39 166.0 171 60.2
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 2.6e-39 166.0 172 58.1
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 2.6e-39 166.0 156 60.9
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 7.7e-39 164.5 174 58.0
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 7.7e-39 164.5 171 60.2
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.0e-38 164.1 182 56.6
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.0e-38 164.1 169 58.6
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 2.9e-38 162.5 181 56.9
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 2.9e-38 162.5 183 56.3
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 2.9e-38 162.5 183 56.3
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 5.0e-38 161.8 181 57.5
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 6.5e-38 161.4 168 58.9
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 1.9e-37 159.8 184 56.0
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 2.5e-37 159.5 180 57.2
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 2.1e-36 156.4 173 56.6
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 2.3e-35 152.9 182 54.4
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 7.0e-32 141.4 167 56.3
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 9.1e-32 141.0 171 49.7
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 2.0e-31 139.8 137 56.9
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 2.0e-31 139.8 156 52.6
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 5.9e-31 138.3 84 82.1
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.6e-28 130.2 178 46.1
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 2.1e-28 129.8 112 59.8
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 1.0e-27 127.5 164 50.0
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.4e-24 117.1 144 53.5
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 4.1e-24 115.5 150 54.0
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 2.3e-19 99.8 152 43.4
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 4.4e-18 95.5 154 37.7
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 2.2e-17 93.2 141 44.0
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 5.4e-16 88.6 135 49.6
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 7.2e-13 78.2 170 40.6


User provided reference genes

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