Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028428 Chenopodium quinoa HOM05D004782 ORTHO05D005498 1.0e-115 420.2 236 100.0
EL10Ac6g14096 Beta vulgaris HOM05D004782 ORTHO05D005498 2.5e-85 319.3 264 64.8
Ah.02g128240 Amaranthus hybridus HOM05D004782 ORTHO05D005498 3.3e-82 308.9 275 60.4
Hund13000 Selenicereus undatus HOM05D004782 ORTHO05D005498 6.9e-80 301.2 268 59.7
Cfa007334 Carpinus fangiana HOM05D004782 ORTHO05D005498 3.9e-75 285.4 231 64.5
Ciclev10018402m.g Citrus clementina HOM05D004782 ORTHO05D005498 2.9e-70 269.2 260 58.1
Potri.001G342400 Populus trichocarpa HOM05D004782 ORTHO05D005498 3.8e-70 268.9 245 65.7
Sabra16G0222000 Salix brachista HOM05D004782 ORTHO05D005498 6.5e-70 268.1 244 59.0
COL.COLO4_29185 Corchorus olitorius HOM05D004782 ORTHO05D005498 3.2e-69 265.8 223 63.7
Dinv25722 Davidia involucrata HOM05D004782 ORTHO05D005498 1.2e-68 263.8 266 56.4
Haze_14764 Corylus avellana HOM05D004782 ORTHO05D005498 1.6e-68 263.5 276 54.0
Sc03g0007250 Simmondsia chinensis HOM05D004782 ORTHO05D005498 3.6e-68 262.3 269 55.0
TWI36G0764 Tripterygium wilfordii HOM05D004782 ORTHO05D005498 6.1e-68 261.5 268 55.2
FvH4_6g51920 Fragaria vesca HOM05D004782 ORTHO05D005498 1.4e-67 260.4 273 53.5
RcHm_v2.0_Chr2g0173401 Rosa chinensis HOM05D004782 ORTHO05D005498 3.9e-67 258.8 280 52.5
CSS0038869 Camellia sinensis var. sinensis HOM05D004782 ORTHO05D005498 6.7e-67 258.1 257 54.5
FAN14G2962 Fragaria x ananassa HOM05D004782 ORTHO05D005498 6.7e-67 258.1 278 52.5
Manes.15G152300 Manihot esculenta HOM05D004782 ORTHO05D005498 8.8e-67 257.7 259 59.1
Lalb_Chr14g0362901 Lupinus albus HOM05D004782 ORTHO05D005498 1.1e-66 257.3 264 54.5
Prupe.3G294600 Prunus persica HOM05D004782 ORTHO05D005498 1.1e-66 257.3 270 55.2
TAR374G0154 Trochodendron aralioides HOM05D004782 ORTHO05D005498 1.1e-66 257.3 260 60.0
Duzib147G0999 Durio zibethinus HOM05D004782 ORTHO05D005498 1.5e-66 256.9 239 59.8
Hma1.2p1_0818F.1_g223300 Hydrangea macrophylla HOM05D004782 ORTHO05D005498 2.0e-66 256.5 252 56.3
Nn3g16678 Nelumbo nucifera HOM05D004782 ORTHO05D005498 2.6e-66 256.1 261 55.9
Rhsim08G0048200 Rhododendron simsii HOM05D004782 ORTHO05D005498 2.6e-66 256.1 265 55.8
Cpa.g.sc130.76 Carica papaya HOM05D004782 ORTHO05D005498 3.3e-66 255.8 262 55.7
MD17G1021600 Malus domestica HOM05D004782 ORTHO05D005498 1.3e-65 253.8 267 52.8
SGA_v2.0_scaffold18G08270 Striga asiatica HOM05D001715 ORTHO05D004824 2.2e-65 253.1 266 53.8
Atru.chr6.2436 Acer truncatum HOM05D004782 ORTHO05D005498 2.8e-65 252.7 253 55.3
QL02p073881 Quercus lobata HOM05D004782 ORTHO05D005498 1.8e-64 250.0 281 50.5
CAN.G473.32 Capsicum annuum HOM05D004782 ORTHO05D005498 2.4e-64 249.6 264 53.0
FAN05G5758 Fragaria x ananassa HOM05D004782 ORTHO05D005498 3.1e-64 249.2 286 50.3
Thecc.04G020400 Theobroma cacao HOM05D004782 ORTHO05D005498 5.3e-64 248.4 251 55.4
Cc07_g00060 Coffea canephora HOM05D004782 ORTHO05D005498 7.0e-64 248.1 249 55.4
Gohir.D10G085900 Gossypium hirsutum HOM05D004782 ORTHO05D005498 7.0e-64 248.1 243 56.8
MD09G1021700 Malus domestica HOM05D004782 ORTHO05D005498 7.0e-64 248.1 271 51.7
CANSAT01G0425 Cannabis sativa HOM05D004782 ORTHO05D005498 9.1e-64 247.7 264 55.7
Gorai.011G094100 Gossypium raimondii HOM05D004782 ORTHO05D005498 9.1e-64 247.7 243 56.8
Migut.H00022 Erythranthe guttata HOM05D004782 ORTHO05D005498 2.6e-63 246.1 264 52.3
SGA_v2.0_scaffold135G34920 Striga asiatica HOM05D004782 ORTHO05D005498 3.5e-63 245.7 264 52.3
Aqoxy3G01250 Aquilegia oxysepala HOM05D004782 ORTHO05D005498 4.5e-63 245.4 276 55.4
Peaxi162Scf00420g00132 Petunia axillaris HOM05D004782 ORTHO05D005498 7.7e-63 244.6 258 52.7
Gohir.A10G101700 Gossypium hirsutum HOM05D004782 ORTHO05D005498 1.7e-62 243.4 242 58.7
Ca_07059_v3 Cicer arietinum L. HOM05D004782 ORTHO05D005498 6.5e-62 241.5 273 50.9
MSTRG.3133 Avicennia marina HOM05D004782 ORTHO05D005498 3.2e-61 239.2 255 51.0
FAN02G4014 Fragaria x ananassa HOM05D004782 ORTHO05D005498 4.2e-61 238.8 284 50.4
Lj1g0001798 Lotus japonicus HOM05D004782 ORTHO05D005498 4.2e-61 238.8 269 50.6
Dinv33420 Davidia involucrata HOM05D004782 ORTHO05D005498 7.2e-61 238.0 197 61.9
TPR.G1089 Trifolium pratense HOM05D004782 ORTHO05D005498 9.4e-61 237.7 267 52.4
Sopen02g038150 Solanum pennellii HOM05D004782 ORTHO05D005498 3.6e-60 235.7 253 54.5
Solyc02g093510.3 Solanum lycopersicum HOM05D004782 ORTHO05D005498 6.1e-60 235.0 253 54.5
VMungo0647G2046 Vigna mungo HOM05D004782 ORTHO05D005498 6.1e-60 235.0 294 48.3
Actinidia18440 Actinidia chinensis HOM05D004782 ORTHO05D005498 1.8e-59 233.4 193 59.6
Eucgr.I01726 Eucalyptus grandis HOM05D004782 ORTHO05D005498 3.0e-59 232.6 254 59.1
unitig_62.g23373 Utricularia gibba HOM05D004782 ORTHO05D005498 8.8e-59 231.1 244 52.0
vmacro18299 Vaccinium macrocarpon HOM05D004782 ORTHO05D005498 5.7e-58 228.4 295 46.4
CiPaw.03G046200 Carya illinoinensis HOM05D004782 ORTHO05D005498 1.3e-57 227.3 223 55.2
ClCG10G013750 Citrullus lanatus HOM05D004782 ORTHO05D005498 3.7e-57 225.7 263 52.9
HanXRQChr14g0451131 Helianthus annuus HOM05D004782 ORTHO05D005498 3.7e-57 225.7 269 53.5
PSO017G6962 Papaver somniferum HOM05D004782 ORTHO05D005498 3.7e-57 225.7 273 48.7
Psat5g038480 Pisum sativum HOM05D004782 ORTHO05D005498 3.7e-57 225.7 271 49.1
PSO478G2740 Papaver somniferum HOM05D004782 ORTHO05D005498 6.3e-57 224.9 281 47.7
Phvul.008G228200 Phaseolus vulgaris HOM05D004782 ORTHO05D005498 6.3e-57 224.9 281 47.7
Glyma.16G068500 Glycine max HOM05D004782 ORTHO05D005498 2.4e-56 223.0 278 47.5
ATR0122G021 Amborella trichopoda HOM05D004782 ORTHO05D005498 5.3e-56 221.9 253 47.8
PSO339G5508 Papaver somniferum HOM05D004782 ORTHO05D005498 5.3e-56 221.9 268 50.4
SalBow1G0524 Salvia bowleyana HOM05D004782 ORTHO05D005498 1.2e-55 220.7 268 47.8
DCAR_011265 Daucus carota HOM05D004782 ORTHO05D005498 1.6e-55 220.3 272 50.0
MELO3C026593.2 Cucumis melo HOM05D004782 ORTHO05D005498 2.6e-55 219.5 267 51.3
CsaV3_3G042920 Cucumis sativus L. HOM05D004782 ORTHO05D005498 2.2e-54 216.5 250 53.2
Medtr7g033120 Medicago truncatula HOM05D004782 ORTHO05D005498 2.9e-54 216.1 252 49.2
Sp6g29580 Schrenkiella parvula HOM05D004782 ORTHO05D005498 8.5e-54 214.5 207 51.2
PGR142G1749 Punica granatum HOM05D004782 ORTHO05D005498 1.5e-53 213.8 206 55.3
CDE02G1226 Ceratophyllum demersum HOM05D004782 ORTHO05D005498 3.2e-53 212.6 226 51.3
AL6G25170 Arabidopsis lyrata HOM05D004782 ORTHO05D005498 7.2e-53 211.5 224 50.9
BcaB01g06372 Brassica carinata HOM05D004782 ORTHO05D005498 9.4e-53 211.1 219 49.3
CARHR198870 Cardamine hirsuta HOM05D004782 ORTHO05D005498 2.1e-52 209.9 222 49.1
A03p06620 Brassica napus HOM05D004782 ORTHO05D005498 3.6e-52 209.1 203 52.7
BraA03t09994Z Brassica rapa HOM05D004782 ORTHO05D005498 3.6e-52 209.1 203 52.7
CDE09G1218 Ceratophyllum demersum HOM05D004782 ORTHO05D005498 3.6e-52 209.1 247 47.8
ECA238G0280 Erigeron canadensis HOM05D004782 ORTHO05D005498 4.7e-52 208.8 277 52.7
Nitab4.5_0001562g0090 Nicotiana tabacum HOM05D004782 ORTHO05D005498 8.0e-52 208.0 232 50.4
C03p07650 Brassica napus HOM05D004782 ORTHO05D005498 1.0e-51 207.6 206 51.0
Aa31LG11G15220 Aethionema arabicum HOM05D004782 ORTHO05D005498 1.4e-51 207.2 206 51.5
BcaC03g13490 Brassica carinata HOM05D004782 ORTHO05D005498 1.4e-51 207.2 219 48.4
C02p06750 Brassica napus HOM05D004782 ORTHO05D005498 1.4e-51 207.2 222 47.7
BolC2t06621H Brassica oleracea HOM05D004782 ORTHO05D005498 3.0e-51 206.1 220 48.2
Glyma.16G018100 Glycine max HOM05D004782 ORTHO05D005498 3.0e-51 206.1 294 44.6
Carub.0006s1262 Capsella rubella HOM05D004782 ORTHO05D005498 4.0e-51 205.7 205 50.7
AT5G14440 Arabidopsis thaliana HOM05D004782 ORTHO05D005498 6.8e-51 204.9 218 50.5
BraA02t05220Z Brassica rapa HOM05D004782 ORTHO05D005498 6.8e-51 204.9 204 49.5
CiPaw.04G029900 Carya illinoinensis HOM05D004782 ORTHO05D005498 6.8e-51 204.9 214 52.3
Sed0010446 Sechium edule HOM05D004782 ORTHO05D005498 6.8e-51 204.9 285 52.3
BcaNung03155 Brassica carinata HOM05D004782 ORTHO05D005498 1.2e-50 204.1 223 48.4
BolC3t13265H Brassica oleracea HOM05D004782 ORTHO05D005498 1.2e-50 204.1 205 50.7
THA.LOC104802393 Tarenaya hassleriana HOM05D004782 ORTHO05D005498 2.0e-50 203.4 203 53.7
A02p02500 Brassica napus HOM05D004782 ORTHO05D005498 2.6e-50 203.0 221 46.6
Thhalv10014310m.g Eutrema salsugineum HOM05D004782 ORTHO05D005498 7.5e-50 201.4 202 50.5
PGSC0003DMG400012612 Solanum tuberosum HOM05D004782 ORTHO05D005498 7.5e-50 201.4 232 53.4
Lsat_1_v5_gn_2_91141 Lactuca sativa HOM05D004782 ORTHO05D005498 9.8e-50 201.1 212 51.9
GSVIVG01032375001 Vitis vinifera HOM05D004782 ORTHO05D005498 9.8e-50 201.1 227 51.1
AT5G40570 Arabidopsis thaliana HOM05D004782 ORTHO05D005498 4.8e-49 198.7 216 50.5
MBI06_g10164_MAGBIO Magnolia biondii HOM05D004782 ORTHO05D005498 6.3e-49 198.4 261 44.8
CARHR261410 Cardamine hirsuta HOM05D004782 ORTHO05D005498 1.2e-47 194.1 216 48.6
Sp7g01290 Schrenkiella parvula HOM05D004782 ORTHO05D005498 1.0e-46 191.0 219 47.9
Carub.0007s3495 Capsella rubella HOM05D004782 ORTHO05D005498 1.7e-46 190.3 216 49.1
Lju41A44T82 Lonicera japonica HOM05D004782 ORTHO05D005498 2.9e-46 189.5 177 57.1
AL7G49230 Arabidopsis lyrata HOM05D004782 ORTHO05D005498 1.5e-45 187.2 222 48.2
Hma1.2p1_1747F.1_g300620 Hydrangea macrophylla HOM05D004782 ORTHO05D005498 2.5e-45 186.4 224 47.8
BcaB02g07942 Brassica carinata HOM05D004782 ORTHO05D005498 7.2e-45 184.9 213 48.8
Aa31LG9G1060 Aethionema arabicum HOM05D004782 ORTHO05D005498 1.2e-44 184.1 220 47.7
SEGI_27694 Sequoiadendron giganteum HOM05D004782 ORTHO05D005498 3.6e-44 182.6 250 40.8
BcaC08g44464 Brassica carinata HOM05D004782 ORTHO05D005498 8.0e-44 181.4 217 47.0
Thhalv10027935m.g Eutrema salsugineum HOM05D004782 ORTHO05D005498 8.0e-44 181.4 221 47.1
Os04g0480400 Oryza sativa ssp. japonica HOM05D004782 ORTHO05D005498 8.0e-44 181.4 252 45.6
THA.LOC104805360 Tarenaya hassleriana HOM05D004782 ORTHO05D005498 8.0e-44 181.4 250 45.2
PGR083G1527 Punica granatum HOM05D004782 ORTHO05D005498 1.4e-43 180.6 227 49.8
FAN09G1186 Fragaria x ananassa HOM05D004782 ORTHO05D005498 3.0e-43 179.5 110 73.6
Nitab4.5_0006683g0090 Nicotiana tabacum HOM05D004782 ORTHO05D005498 3.0e-43 179.5 247 45.7
BcaNung03158 Brassica carinata HOM05D004782 ORTHO05D005498 6.8e-43 178.3 177 53.7
BcaC03g13488 Brassica carinata HOM05D004782 ORTHO05D005498 6.3e-41 171.8 126 62.7
BolC6t37113H Brassica oleracea HOM05D000001 ORTHO05D000003 8.3e-41 171.4 229 44.5
Zm00001eb424970 Zea mays HOM05D004782 ORTHO05D005498 1.1e-40 171.0 251 44.6
Hma1.2p1_1563F.1_g290780 Hydrangea macrophylla HOM05D004782 ORTHO05D005498 4.5e-39 165.6 101 72.3
DCAR_021737 Daucus carota HOM05D004782 ORTHO05D005498 7.7e-39 164.9 249 43.8
BcaC03g13487 Brassica carinata HOM05D000631 ORTHO05D005498 3.8e-38 162.5 116 63.8
Actinidia33328 Actinidia chinensis HOM05D004782 ORTHO05D005498 3.3e-37 159.5 116 63.8
arahy.Tifrunner.gnm1.ann1.6S1J49 Arachis hypogaea HOM05D004782 ORTHO05D005498 3.4e-34 149.4 265 40.4
BcaC01g01812 Brassica carinata HOM05D004782 ORTHO05D005498 1.3e-33 147.5 203 41.4
arahy.Tifrunner.gnm1.ann1.65GF4N Arachis hypogaea HOM05D004782 ORTHO05D005498 2.2e-33 146.7 266 39.8
C09p40620 Brassica napus HOM05D004782 ORTHO05D005498 2.4e-32 143.3 212 40.1
BcaC01g01740 Brassica carinata HOM05D004782 ORTHO05D005498 3.2e-32 142.9 135 49.6
BolC3t19536H Brassica oleracea HOM05D004782 ORTHO05D005498 3.2e-32 142.9 135 49.6
C08p04380 Brassica napus HOM05D004782 ORTHO05D005498 3.5e-31 139.4 125 53.6
AagrBONN_evm.TU.Sc2ySwM_368.1010 Anthoceros agrestis HOM05D004782 ORTHO05D005498 4.6e-31 139.0 192 37.5
BolC7t41458H Brassica oleracea HOM05D004782 ORTHO05D005498 5.9e-31 138.7 101 60.4
Mapoly0013s0192 Marchantia polymorpha HOM05D004782 ORTHO05D005498 2.3e-30 136.7 209 36.8
HPP92_008082 Vanilla planifolia HOM05D004782 ORTHO05D005498 3.0e-30 136.3 223 39.0
BolC9t56944H Brassica oleracea HOM05D004782 ORTHO05D005498 2.5e-29 133.3 232 37.1
BcaC07g37075 Brassica carinata HOM05D004782 ORTHO05D005498 5.6e-29 132.1 124 50.0
BcaC04g20684 Brassica carinata HOM05D004782 ORTHO05D005498 4.7e-28 129.0 202 38.6
SMO119G0179 Selaginella moellendorffii HOM05D004782 ORTHO05D005498 2.3e-27 126.7 159 43.4
C03p72400 Brassica napus HOM05D000186 ORTHO05D005498 6.8e-27 125.2 119 48.7
BcaC05g29299 Brassica carinata HOM05D004782 ORTHO05D014986 9.8e-26 121.3 100 57.0
BolC8t47241H Brassica oleracea HOM05D004782 ORTHO05D005498 1.3e-25 120.9 84 60.7
C05p55830 Brassica napus HOM05D004782 ORTHO05D005498 2.2e-25 120.2 86 60.5
C07p10120 Brassica napus HOM05D000186 ORTHO05D005498 9.2e-24 114.8 88 56.8
Sabra15G0083700 Salix brachista HOM05D004782 ORTHO05D005498 1.3e-22 110.9 68 73.5
BolC5t34251H Brassica oleracea HOM05D004782 ORTHO05D005498 5.0e-22 109.0 86 57.0
Gohir.A04G046350 Gossypium hirsutum HOM05D004782 ORTHO05D005498 7.3e-21 105.1 79 63.3
Lj7A601G104 Lonicera japonica HOM05D004782 ORTHO05D005498 6.8e-19 98.6 149 42.3
CDE06G1742 Ceratophyllum demersum HOM05D004782 ORTHO05D005498 1.2e-12 77.8 125 37.6
CBR_g2746 Chara braunii HOM05D001539 ORTHO05D000937 7.6e-10 68.6 113 36.3
Actinidia35780 Actinidia chinensis HOM05D004782 ORTHO05D005498 4.9e-09 65.9 39 74.4
Aqoxy3G01251 Aquilegia oxysepala HOM05D004782 ORTHO05D005498 4.6e-07 59.3 65 46.2
MD10G1172000 Malus domestica HOM05D004782 ORTHO05D005498 1.0e-06 58.2 79 48.1


User provided reference genes

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