Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028411 Chenopodium quinoa HOM05D005733 ORTHO05D007442 1.4e-128 463.0 238 100.0
AUR62039751 Chenopodium quinoa HOM05D005733 ORTHO05D007442 7.4e-122 440.7 237 95.4
EL10Ac8g18867 Beta vulgaris HOM05D005733 ORTHO05D007442 1.1e-93 347.1 222 80.6
Hund08988 Selenicereus undatus HOM05D005733 ORTHO05D007442 7.7e-79 297.7 222 72.1
TWI63G0727 Tripterygium wilfordii HOM05D005733 ORTHO05D007442 3.8e-70 268.9 216 65.3
GSVIVG01023749001 Vitis vinifera HOM05D005733 ORTHO05D007442 3.8e-70 268.9 236 62.7
CiPaw.07G186800 Carya illinoinensis HOM05D005733 ORTHO05D007442 2.8e-68 262.7 229 60.3
Cfa013546 Carpinus fangiana HOM05D005733 ORTHO05D007442 8.0e-68 261.2 165 73.3
CSS0014936 Camellia sinensis var. sinensis HOM05D005733 ORTHO05D007442 1.0e-67 260.8 198 64.6
Actinidia20956 Actinidia chinensis HOM05D005733 ORTHO05D007442 3.0e-67 259.2 197 66.0
Rhsim01G0012100 Rhododendron simsii HOM05D005733 ORTHO05D007442 4.0e-67 258.8 205 63.9
COL.COLO4_27474 Corchorus olitorius HOM05D005733 ORTHO05D007442 2.0e-66 256.5 213 62.4
Duzib187G0641 Durio zibethinus HOM05D005733 ORTHO05D007442 2.6e-66 256.1 218 60.1
QL02p095666 Quercus lobata HOM05D005733 ORTHO05D007442 2.6e-66 256.1 220 63.2
Sc08g0005630 Simmondsia chinensis HOM05D005733 ORTHO05D007442 2.6e-66 256.1 219 60.7
MELO3C013348.2 Cucumis melo HOM05D005733 ORTHO05D007442 3.4e-66 255.8 220 59.1
Atru.chr7.506 Acer truncatum HOM05D005733 ORTHO05D007442 7.5e-66 254.6 221 61.5
Ciclev10010607m.g Citrus clementina HOM05D005733 ORTHO05D007442 1.3e-65 253.8 198 63.1
PGR142G3644 Punica granatum HOM05D005733 ORTHO05D007442 1.7e-65 253.4 215 60.0
CsaV3_7G001070 Cucumis sativus L. HOM05D005733 ORTHO05D007442 2.2e-65 253.1 228 58.3
Gorai.004G103800 Gossypium raimondii HOM05D005733 ORTHO05D007442 6.3e-65 251.5 216 60.2
THA.LOC104811821 Tarenaya hassleriana HOM05D005733 ORTHO05D007442 1.1e-64 250.8 205 63.4
Thecc.09G161700 Theobroma cacao HOM05D005733 ORTHO05D007442 1.4e-64 250.4 225 59.6
Glyma.13G091800 Glycine max HOM05D005733 ORTHO05D007442 2.4e-64 249.6 212 59.4
Hma1.2p1_1531F.1_g289230 Hydrangea macrophylla HOM05D005733 ORTHO05D007442 4.1e-64 248.8 221 61.5
Lj9A728T23 Lonicera japonica HOM05D005733 ORTHO05D007442 5.4e-64 248.4 230 58.7
MD16G1262600 Malus domestica HOM05D005733 ORTHO05D007442 5.4e-64 248.4 204 61.3
Sed0012123 Sechium edule HOM05D005733 ORTHO05D007442 5.4e-64 248.4 215 59.5
CARHR235730 Cardamine hirsuta HOM05D005733 ORTHO05D007442 7.0e-64 248.1 192 65.1
Oeu058827.1 Olea europaea HOM05D005733 ORTHO05D007442 7.0e-64 248.1 164 70.7
BcaC06g32650 Brassica carinata HOM05D005733 ORTHO05D007442 4.5e-63 245.4 215 59.5
CANSAT11G0464 Cannabis sativa HOM05D005733 ORTHO05D007442 1.0e-62 244.2 219 58.0
MSTRG.19675 Avicennia marina HOM05D005733 ORTHO05D007442 1.3e-62 243.8 201 61.2
AL7G24580 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 1.7e-62 243.4 224 58.5
Glyma.17G068500 Glycine max HOM05D005733 ORTHO05D007442 1.7e-62 243.4 205 59.5
BraA03t14833Z Brassica rapa HOM05D005733 ORTHO05D007442 3.8e-62 242.3 214 59.8
Gohir.A08G096462 Gossypium hirsutum HOM05D005733 ORTHO05D007442 3.8e-62 242.3 196 60.7
ClCG02G004040 Citrullus lanatus HOM05D005733 ORTHO05D007442 5.0e-62 241.9 254 51.6
Cc06_g14000 Coffea canephora HOM05D005733 ORTHO05D007442 5.0e-62 241.9 199 59.8
Thhalv10025984m.g Eutrema salsugineum HOM05D005733 ORTHO05D007442 5.0e-62 241.9 224 56.2
A03p57670 Brassica napus HOM05D005733 ORTHO05D007442 8.6e-62 241.1 214 59.3
Sabra06G0134700 Salix brachista HOM05D005733 ORTHO05D007442 8.6e-62 241.1 205 58.0
Aa31LG7G2230 Aethionema arabicum HOM05D005733 ORTHO05D007442 1.5e-61 240.4 218 56.0
RcHm_v2.0_Chr4g0404931 Rosa chinensis HOM05D005733 ORTHO05D007442 1.5e-61 240.4 207 59.9
TAR383G0601 Trochodendron aralioides HOM05D005733 ORTHO05D007442 1.5e-61 240.4 234 56.4
Sp7g25980 Schrenkiella parvula HOM05D005733 ORTHO05D007442 1.9e-61 240.0 225 57.3
AT4G28030 Arabidopsis thaliana HOM05D005733 ORTHO05D007442 7.3e-61 238.0 225 57.8
Potri.006G176500 Populus trichocarpa HOM05D005733 ORTHO05D007442 7.3e-61 238.0 205 58.5
C07p55880 Brassica napus HOM05D005733 ORTHO05D007442 9.5e-61 237.7 208 60.1
Carub.0007s1276 Capsella rubella HOM05D005733 ORTHO05D007442 1.2e-60 237.3 224 56.7
Medtr4g129490 Medicago truncatula HOM05D005733 ORTHO05D007442 1.6e-60 236.9 203 57.6
Migut.J01418 Erythranthe guttata HOM05D005733 ORTHO05D007442 2.1e-60 236.5 170 66.5
PSO063G5638 Papaver somniferum HOM05D005733 ORTHO05D007442 2.1e-60 236.5 242 53.7
TPR.G5298 Trifolium pratense HOM05D005733 ORTHO05D007442 3.6e-60 235.7 220 56.4
Manes.06G030000 Manihot esculenta HOM05D005733 ORTHO05D007442 8.0e-60 234.6 239 52.7
Phvul.003G151100 Phaseolus vulgaris HOM05D005733 ORTHO05D007442 8.0e-60 234.6 211 57.3
SalBow6G0174 Salvia bowleyana HOM05D005733 ORTHO05D007442 8.0e-60 234.6 164 67.7
Ca_21184_v3 Cicer arietinum L. HOM05D005733 ORTHO05D007442 1.4e-59 233.8 220 55.9
FvH4_4g23510 Fragaria vesca HOM05D005733 ORTHO05D007442 1.4e-59 233.8 208 61.1
Aqoxy7G03235 Aquilegia oxysepala HOM05D005733 ORTHO05D007442 1.8e-59 233.4 196 58.2
arahy.Tifrunner.gnm1.ann1.0JVE27 Arachis hypogaea HOM05D005733 ORTHO05D007442 2.3e-59 233.0 191 61.8
Lj4g0011389 Lotus japonicus HOM05D005733 ORTHO05D007442 2.3e-59 233.0 212 59.0
DCAR_014719 Daucus carota HOM05D005733 ORTHO05D007442 3.1e-59 232.6 178 60.7
FAN12G3847 Fragaria x ananassa HOM05D005733 ORTHO05D007442 3.1e-59 232.6 208 61.1
FAN17G0482 Fragaria x ananassa HOM05D005733 ORTHO05D007442 3.1e-59 232.6 209 59.3
Peaxi162Scf00525g00817 Petunia axillaris HOM05D005733 ORTHO05D007442 5.2e-59 231.9 181 63.5
arahy.Tifrunner.gnm1.ann1.GE8FUD Arachis hypogaea HOM05D005733 ORTHO05D007442 6.8e-59 231.5 191 61.3
PSO782G5004 Papaver somniferum HOM05D005733 ORTHO05D007442 6.8e-59 231.5 242 52.9
VMungo1215G3105 Vigna mungo HOM05D005733 ORTHO05D007442 6.8e-59 231.5 212 58.5
Eucgr.C01245 Eucalyptus grandis HOM05D005733 ORTHO05D007442 3.4e-58 229.2 237 54.4
Nitab4.5_0005985g0010 Nicotiana tabacum HOM05D005733 ORTHO05D007442 3.4e-58 229.2 221 53.4
Sopen07g002430 Solanum pennellii HOM05D005733 ORTHO05D007442 3.4e-58 229.2 199 57.8
PGSC0003DMG402011224 Solanum tuberosum HOM05D005733 ORTHO05D007442 9.8e-58 227.6 212 56.1
CAN.G1870.3 Capsicum annuum HOM05D005733 ORTHO05D007442 3.7e-57 225.7 183 61.2
Solyc07g006340.3 Solanum lycopersicum HOM05D005733 ORTHO05D007442 4.9e-57 225.3 232 53.4
Lsat_1_v5_gn_8_64360 Lactuca sativa HOM05D005733 ORTHO05D007442 6.4e-57 224.9 185 59.5
SGA_v2.0_scaffold66G22515 Striga asiatica HOM05D005733 ORTHO05D007442 6.4e-57 224.9 176 60.2
Psat4g010480 Pisum sativum HOM05D005733 ORTHO05D007442 1.1e-56 224.2 163 63.2
Cpa.g.sc75.16 Carica papaya HOM05D005733 ORTHO05D007442 1.4e-56 223.8 270 47.0
HanXRQChr10g0284091 Helianthus annuus HOM05D005733 ORTHO05D007442 3.2e-56 222.6 227 55.1
ECA236G1842 Erigeron canadensis HOM05D005733 ORTHO05D007442 6.6e-54 214.9 178 59.0
CDE02G3066 Ceratophyllum demersum HOM05D005733 ORTHO05D007442 8.6e-54 214.5 214 52.3
Psat4g048120 Pisum sativum HOM05D005733 ORTHO05D007442 8.0e-52 208.0 142 66.9
Nitab4.5_0005551g0010 Nicotiana tabacum HOM05D005733 ORTHO05D007442 2.3e-51 206.5 204 53.4
unitig_0.g187 Utricularia gibba HOM05D005733 ORTHO05D007442 4.4e-50 202.2 159 60.4
MBI14_g08080_MAGBIO Magnolia biondii HOM05D005733 ORTHO05D007442 4.9e-49 198.7 131 71.0
Lalb_Chr13g0300531 Lupinus albus HOM05D005733 ORTHO05D007442 8.3e-49 198.0 211 52.1
Cc00_g30300 Coffea canephora HOM05D005733 ORTHO05D007442 1.2e-47 194.1 130 68.5
vmacro13073 Vaccinium macrocarpon HOM05D005733 ORTHO05D007442 1.6e-47 193.7 234 51.3
Aa31sc193G30 Aethionema arabicum HOM05D005733 ORTHO05D007442 6.0e-47 191.8 123 71.5
Nn4g23704 Nelumbo nucifera HOM05D005733 ORTHO05D007442 7.8e-47 191.4 190 55.8
HPP92_025686 Vanilla planifolia HOM05D005733 ORTHO05D007442 1.0e-46 191.0 173 57.2
Dinv41304 Davidia involucrata HOM05D005733 ORTHO05D007442 2.5e-45 186.4 182 58.8
ATR0580G232 Amborella trichopoda HOM05D005733 ORTHO05D007442 7.3e-45 184.9 130 66.9
Prupe.1G097300 Prunus persica HOM05D005733 ORTHO05D007442 8.1e-44 181.4 114 72.8
Hund26406 Selenicereus undatus HOM05D005733 ORTHO05D007442 8.1e-44 181.4 185 57.3
FAN05G3225 Fragaria x ananassa HOM05D005733 ORTHO05D007442 1.1e-43 181.0 121 71.1
FAN05G4341 Fragaria x ananassa HOM05D005733 ORTHO05D007442 1.1e-43 181.0 121 71.1
FAN07G2740 Fragaria x ananassa HOM05D005733 ORTHO05D007442 1.4e-40 170.6 167 58.1
CDE05G3532 Ceratophyllum demersum HOM05D001854 ORTHO05D001800 2.4e-40 169.9 125 61.6
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 2.4e-32 143.3 165 47.3
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 9.2e-32 141.4 165 47.3
BcaC09g50518 Brassica carinata HOM05D005733 ORTHO05D007442 1.0e-30 137.9 156 52.6
Os08g0260000 Oryza sativa ssp. japonica HOM05D005733 ORTHO05D007442 5.6e-29 132.1 118 54.2
Haze_22166 Corylus avellana HOM05D005733 ORTHO05D007442 3.6e-28 129.4 73 76.7
Zm00001eb412590 Zea mays HOM05D005733 ORTHO05D007442 3.6e-28 129.4 102 61.8
Haze_22164 Corylus avellana HOM05D005733 ORTHO05D007442 2.4e-27 126.7 148 50.0
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 3.4e-26 122.9 159 42.1
AagrBONN_evm.TU.Sc2ySwM_344.3527 Anthoceros agrestis HOM05D005733 ORTHO05D007442 3.2e-24 116.3 177 42.4
AL3G40460 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 5.4e-24 115.5 77 70.1
Ah.14g084100 Amaranthus hybridus HOM05D005733 ORTHO05D007442 1.6e-23 114.0 139 46.8
Mapoly0019s0038 Marchantia polymorpha HOM05D005733 ORTHO05D007442 1.3e-22 110.9 227 36.6
Pp3c1_4600 Physcomitrium patens HOM05D005733 ORTHO05D007442 3.3e-21 106.3 185 36.8
AL1G31260 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 4.3e-21 105.9 78 65.4
AL6G37990 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 4.3e-21 105.9 78 65.4
AL7G30680 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 4.3e-21 105.9 78 65.4
Ah.14g084080 Amaranthus hybridus HOM05D005733 ORTHO05D007442 2.1e-20 103.6 107 60.7
arahy.Tifrunner.gnm1.ann1.IUS3AS Arachis hypogaea HOM05D005733 ORTHO05D007442 2.6e-18 96.7 76 55.3
arahy.Tifrunner.gnm1.ann1.65BVJ7 Arachis hypogaea HOM05D005733 ORTHO05D007442 2.9e-17 93.2 63 66.7
BolC2t09466H Brassica oleracea HOM05D005733 ORTHO05D007442 8.4e-17 91.7 116 51.7
C02p34360 Brassica napus HOM05D005733 ORTHO05D007442 2.4e-16 90.1 116 50.9
Gohir.D08G097100 Gossypium hirsutum HOM05D005733 ORTHO05D007442 3.5e-15 86.3 216 31.9
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 7.4e-13 78.6 60 53.3
AagrBONN_evm.TU.Sc2ySwM_117.2238 Anthoceros agrestis HOM05D004023 ORTHO05D004681 1.5e-10 70.9 167 33.5
Pp3c11_5280 Physcomitrium patens HOM05D005733 ORTHO05D007442 2.0e-10 70.5 147 33.3
Psat4g048000 Pisum sativum HOM05D005733 ORTHO05D007442 4.5e-10 69.3 45 68.9
C01p24460 Brassica napus HOM05D005733 ORTHO05D007442 1.1e-08 64.7 82 45.1
Pp3c12_9920 Physcomitrium patens HOM05D004023 ORTHO05D004681 3.2e-08 63.2 157 28.0
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 1.6e-07 60.8 33 78.8
ATR1096G005 Amborella trichopoda HOM05D004023 ORTHO05D004681 3.5e-07 59.7 242 28.5
Cre02.g084550 Chlamydomonas reinhardtii HOM05D005733 ORTHO05D007442 3.5e-07 59.7 221 30.8
BcaC09g50520 Brassica carinata HOM05D005733 ORTHO05D007442 1.8e-06 57.4 34 70.6
SEGI_14760 Sequoiadendron giganteum HOM05D004023 ORTHO05D004681 2.3e-06 57.0 174 30.5
arahy.Tifrunner.gnm1.ann1.00M671 Arachis hypogaea HOM05D005733 ORTHO05D007442 3.9e-06 56.2 37 62.2
CSS0012197 Camellia sinensis var. sinensis HOM05D004023 ORTHO05D004681 8.7e-06 55.1 162 29.0


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