Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.9e-148 529.6 370 100.0
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 1.8e-66 257.3 410 44.1
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.6e-62 244.2 396 47.0
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.3e-61 241.1 410 44.1
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 1.7e-61 240.7 399 42.6
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 3.9e-61 239.6 412 41.7
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.3e-60 236.5 410 39.0
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 7.3e-60 235.3 409 39.6
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 4.7e-59 232.6 405 40.5
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 6.2e-59 232.3 447 47.2
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.4e-58 231.1 411 42.1
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.8e-58 230.7 405 45.9
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 4.0e-58 229.6 410 38.8
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.2e-58 229.2 410 38.8
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.2e-58 229.2 410 38.8
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 6.8e-58 228.8 389 45.8
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 2.0e-57 227.3 417 38.4
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 2.6e-57 226.9 411 38.7
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.4e-57 226.5 410 41.7
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 4.4e-57 226.1 391 44.5
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 4.4e-57 226.1 412 43.4
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 5.8e-57 225.7 410 41.7
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 7.6e-57 225.3 407 41.5
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.3e-56 224.6 393 39.9
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 1.7e-56 224.2 406 43.8
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 2.2e-56 223.8 413 41.4
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 2.9e-56 223.4 409 37.9
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 2.9e-56 223.4 373 43.7
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 3.8e-56 223.0 398 41.2
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 6.4e-56 222.2 410 41.2
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 1.1e-55 221.5 416 38.2
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 3.2e-55 219.9 418 43.5
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 3.2e-55 219.9 411 42.1
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 2.1e-54 217.2 430 42.8
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 2.1e-54 217.2 411 41.6
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 3.5e-54 216.5 410 40.0
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 3.5e-54 216.5 411 42.6
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 4.6e-54 216.1 430 39.3
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.3e-53 214.5 401 38.7
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 1.3e-53 214.5 404 41.3
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 2.3e-53 213.8 411 44.8
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 3.0e-53 213.4 416 42.1
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 8.7e-53 211.8 386 46.4
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 8.7e-53 211.8 437 38.0
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 3.3e-52 209.9 388 38.1
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 3.3e-52 209.9 407 44.7
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 4.3e-52 209.5 414 39.1
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 5.6e-52 209.1 413 39.7
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 5.6e-52 209.1 430 42.6
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 7.3e-52 208.8 413 39.5
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.6e-52 208.4 389 40.1
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 9.6e-52 208.4 409 37.9
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 1.3e-51 208.0 414 39.1
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 1.3e-51 208.0 414 39.1
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 2.8e-51 206.8 409 39.1
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 4.8e-51 206.1 414 38.9
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 8.1e-51 205.3 435 38.9
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 1.1e-50 204.9 415 40.7
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 6.9e-50 202.2 407 41.3
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 6.9e-50 202.2 397 43.6
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 9.0e-50 201.8 409 39.1
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 3.4e-49 199.9 248 75.4
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 3.4e-49 199.9 400 42.5
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 4.4e-49 199.5 400 39.8
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 5.8e-49 199.1 349 41.0
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 2.2e-48 197.2 405 42.2
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 2.9e-48 196.8 429 38.5
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 9.3e-47 191.8 409 41.1
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.2e-46 191.4 410 38.0
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.1e-46 190.7 368 37.5
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 6.0e-46 189.1 414 40.8
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 7.9e-46 188.7 412 41.0
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.7e-45 187.6 410 38.0
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 5.1e-45 186.0 412 40.5
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 1.5e-44 184.5 402 41.5
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 3.3e-44 183.3 412 41.3
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 7.4e-44 182.2 347 39.8
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 9.6e-44 181.8 394 40.4
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 2.1e-43 180.6 412 39.1
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 6.2e-43 179.1 347 40.3
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 1.8e-42 177.6 347 39.5
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 4.0e-42 176.4 385 35.6
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 5.3e-42 176.0 396 39.9
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 6.9e-42 175.6 412 41.3
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 1.2e-41 174.9 411 40.9
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 1.2e-41 174.9 389 37.5
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.4e-41 173.3 278 40.3
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 2.2e-40 170.6 349 41.0
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 2.2e-40 170.6 424 42.9
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 2.2e-40 170.6 399 47.1
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 3.5e-38 163.3 411 40.9
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.1e-36 158.3 388 39.2
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 1.1e-34 151.8 284 41.2
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 1.4e-34 151.4 410 31.5
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 4.9e-32 142.9 338 40.2
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 4.8e-27 126.3 309 37.5
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 2.4e-26 124.0 267 33.7
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 9.0e-26 122.1 362 39.0
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 3.2e-23 113.6 311 30.9
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.1e-20 105.1 149 43.6
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 2.4e-18 97.4 343 31.8
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 5.3e-18 96.3 170 37.6
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.1e-15 88.6 326 31.9
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 1.2e-14 85.1 319 34.2
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 7.9e-14 82.4 193 33.7
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 7.9e-14 82.4 190 32.6
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.1e-10 72.0 73 58.9
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 2.0e-09 67.8 51 70.6
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 2.6e-09 67.4 47 61.7
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 6.1e-06 56.2 36 61.1


User provided reference genes

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