Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.1e-150 536.6 260 100.0
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 1.8e-134 482.6 261 88.1
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 2.0e-133 479.2 236 96.6
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.2e-122 443.4 243 85.6
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.7e-116 422.9 260 76.5
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 3.1e-105 385.6 264 69.3
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 3.3e-99 365.5 249 71.5
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 3.3e-99 365.5 249 71.5
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-98 363.2 250 70.8
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.2e-98 361.3 250 70.4
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-97 359.8 250 70.0
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 2.6e-96 355.9 249 69.1
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 3.4e-96 355.5 252 67.9
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 9.9e-96 354.0 253 68.8
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 1.3e-95 353.6 250 68.8
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 1.9e-94 349.7 248 67.7
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 5.4e-94 348.2 246 69.9
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 2.7e-93 345.9 256 64.8
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 3.5e-93 345.5 265 64.9
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 4.6e-93 345.1 252 65.9
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 6.0e-93 344.7 264 63.6
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 7.9e-93 344.4 250 68.4
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.0e-92 344.0 265 64.5
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 1.0e-92 344.0 265 64.5
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.0e-92 344.0 253 65.2
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 2.3e-92 342.8 250 65.6
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 2.3e-92 342.8 235 71.5
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 2.3e-92 342.8 235 71.5
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 1.1e-91 340.5 245 67.8
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 1.9e-91 339.7 262 63.7
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 7.4e-91 337.8 263 65.0
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 7.4e-91 337.8 242 68.2
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 1.6e-90 336.7 243 65.4
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.6e-90 336.7 242 68.2
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.1e-90 336.3 253 62.8
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 2.8e-90 335.9 238 68.5
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 4.8e-90 335.1 242 67.8
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 6.2e-90 334.7 242 67.8
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 1.8e-89 333.2 265 62.6
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 1.8e-89 333.2 242 67.4
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 6.9e-89 331.3 242 67.4
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.2e-88 330.5 265 63.8
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.0e-88 329.7 242 66.5
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 2.0e-88 329.7 266 61.7
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.4e-88 328.9 258 64.3
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 3.4e-88 328.9 249 65.1
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.5e-88 328.6 236 68.6
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 4.5e-88 328.6 279 58.1
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 4.5e-88 328.6 264 61.4
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 5.8e-88 328.2 240 66.7
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 9.9e-88 327.4 264 62.1
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.2e-87 326.2 242 66.5
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 4.9e-87 325.1 266 60.5
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 1.1e-86 323.9 247 66.0
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.2e-86 322.4 251 64.5
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 4.2e-86 322.0 249 63.5
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 7.1e-86 321.2 266 60.2
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.6e-85 320.1 265 61.5
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.6e-85 320.1 263 61.2
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 2.7e-85 319.3 266 60.2
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 3.5e-85 318.9 258 60.5
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 4.6e-85 318.5 248 62.1
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 7.9e-85 317.8 231 68.0
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.3e-84 317.0 249 63.1
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 1.3e-84 317.0 233 66.1
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 2.3e-84 316.2 261 60.9
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 3.0e-84 315.8 237 65.0
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 3.0e-84 315.8 247 61.5
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 3.9e-84 315.5 264 59.8
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 5.1e-84 315.1 247 61.5
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 5.1e-84 315.1 250 62.8
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.7e-84 314.3 250 64.0
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 7.4e-83 311.2 248 62.1
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 9.6e-83 310.8 244 61.9
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 1.6e-82 310.1 245 64.5
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 2.1e-82 309.7 249 60.6
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 3.7e-82 308.9 245 60.0
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 6.2e-82 308.1 237 63.7
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 2.4e-81 306.2 238 63.4
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 2.4e-81 306.2 251 62.5
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 3.1e-81 305.8 238 63.4
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 3.1e-81 305.8 237 62.9
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 5.3e-81 305.1 251 62.5
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 2.6e-80 302.8 233 63.5
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.3e-79 300.4 233 62.2
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 1.9e-78 296.6 266 57.5
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.1e-77 293.1 248 60.5
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 3.0e-76 289.3 248 56.9
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.6e-74 283.5 219 64.4
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 2.8e-74 282.7 236 58.1
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 6.9e-73 278.1 220 63.2
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.5e-72 276.9 220 63.2
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.5e-72 276.9 220 63.2
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 2.6e-72 276.2 260 53.5
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 1.7e-71 273.5 254 58.3
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 3.8e-71 272.3 254 55.1
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 3.2e-70 269.2 214 63.6
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 2.2e-63 246.5 164 68.9
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.4e-57 227.3 235 47.7
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 2.1e-53 213.4 251 43.0
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 8.8e-52 208.0 165 60.0
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 1.2e-48 197.6 148 69.6
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 6.1e-45 185.3 128 69.5
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 2.3e-44 183.3 143 60.1
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 2.8e-42 176.4 192 49.0
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.3e-42 175.3 122 70.5
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 3.1e-41 172.9 135 59.3
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 4.1e-41 172.6 138 61.6
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 7.0e-41 171.8 284 35.6
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.5e-32 142.9 105 66.7
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.7e-31 140.6 105 66.7
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 2.9e-31 139.8 118 57.6
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 1.1e-30 137.9 167 45.5
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 9.5e-30 134.8 110 56.4
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 8.9e-28 128.3 92 67.4
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-27 127.5 103 61.2
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.3e-23 113.6 110 52.7
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.9e-20 101.7 64 75.0
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-17 94.0 64 68.8
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.2e-13 81.3 64 64.1
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 2.9e-10 70.1 112 42.9
Cre02.g090600 Chlamydomonas reinhardtii HOM05D006038 ORTHO05D007547 1.9e-09 67.4 155 27.7
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 4.1e-09 66.2 52 57.7
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 1.0e-07 61.6 53 54.7
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 1.0e-07 61.6 53 54.7
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 1.0e-07 61.6 53 54.7
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 1.7e-07 60.8 56 51.8
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 1.1e-06 58.2 48 52.1


User provided reference genes

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