Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028364 Chenopodium quinoa HOM05D006842 ORTHO05D008908 3.9e-104 382.5 386 100.0
AUR62025363 Chenopodium quinoa HOM05D006842 ORTHO05D008908 3.9e-96 355.9 386 96.1
Ah.14g084430 Amaranthus hybridus HOM05D006842 ORTHO05D008908 1.4e-74 284.3 386 86.3
Hund08945 Selenicereus undatus HOM05D006842 ORTHO05D008908 1.2e-60 238.0 384 80.5
AUR62039733 Chenopodium quinoa HOM05D006842 ORTHO05D008908 7.2e-42 175.6 97 91.8
Sc08g0004670 Simmondsia chinensis HOM05D006842 ORTHO05D008908 1.5e-31 141.4 406 68.0
CSS0012280 Camellia sinensis var. sinensis HOM05D006842 ORTHO05D008908 9.1e-29 132.1 413 63.9
Ciclev10010743m.g Citrus clementina HOM05D006842 ORTHO05D008908 1.7e-27 127.9 403 66.0
Cfa013438 Carpinus fangiana HOM05D006842 ORTHO05D008908 1.1e-26 125.2 412 63.8
Haze_22005 Corylus avellana HOM05D006842 ORTHO05D008908 1.5e-26 124.8 413 63.7
Actinidia01285 Actinidia chinensis HOM05D006842 ORTHO05D008908 1.2e-25 121.7 414 64.0
Psat1g144960 Pisum sativum HOM05D006842 ORTHO05D008908 2.1e-25 120.9 386 64.5
Potri.018G143800 Populus trichocarpa HOM05D006842 ORTHO05D008908 2.1e-25 120.9 412 64.6
GSVIVG01012780001 Vitis vinifera HOM05D006842 ORTHO05D008908 6.1e-25 119.4 377 67.9
FvH4_4g07420 Fragaria vesca HOM05D006842 ORTHO05D008908 8.0e-25 119.0 415 61.7
FAN12G0114 Fragaria x ananassa HOM05D006842 ORTHO05D008908 1.8e-24 117.9 413 61.7
QL12p035267 Quercus lobata HOM05D006842 ORTHO05D008908 2.3e-24 117.5 412 63.3
DCAR_020473 Daucus carota HOM05D006842 ORTHO05D008908 3.0e-24 117.1 398 61.1
MSTRG.26539 Avicennia marina HOM05D006842 ORTHO05D008908 1.5e-23 114.8 404 64.1
TPR.G30782 Trifolium pratense HOM05D006842 ORTHO05D008908 1.5e-23 114.8 413 62.5
vmacro20826 Vaccinium macrocarpon HOM05D006842 ORTHO05D008908 2.0e-23 114.4 415 62.7
Ca_02053_v3 Cicer arietinum L. HOM05D006842 ORTHO05D008908 5.7e-23 112.8 413 54.7
Medtr2g037740 Medicago truncatula HOM05D006842 ORTHO05D008908 1.7e-22 111.3 414 61.4
RcHm_v2.0_Chr4g0399881 Rosa chinensis HOM05D006842 ORTHO05D008908 3.7e-22 110.2 419 61.3
TAR626G0090 Trochodendron aralioides HOM05D006842 ORTHO05D008908 8.2e-22 109.0 416 62.5
PGR142G3186 Punica granatum HOM05D006842 ORTHO05D008908 1.4e-21 108.2 390 57.9
CiPaw.16G087400 Carya illinoinensis HOM05D006842 ORTHO05D008908 4.1e-21 106.7 414 61.1
Sabra18G0117200 Salix brachista HOM05D006842 ORTHO05D008908 7.0e-21 105.9 410 63.7
Aa31LG3G13140 Aethionema arabicum HOM05D006842 ORTHO05D008908 2.0e-20 104.4 384 64.3
TWI34G1525 Tripterygium wilfordii HOM05D006842 ORTHO05D008908 2.7e-20 104.0 380 66.3
Rhsim01G0118900 Rhododendron simsii HOM05D006842 ORTHO05D008908 1.7e-19 101.3 415 32.3
Gohir.D08G028300 Gossypium hirsutum HOM05D006842 ORTHO05D008908 5.0e-19 99.8 401 62.8
Thecc.09G184100 Theobroma cacao HOM05D006842 ORTHO05D008908 8.5e-19 99.0 323 73.1
Gohir.A08G017700 Gossypium hirsutum HOM05D006842 ORTHO05D008908 1.9e-18 97.8 404 62.6
Cpa.g.sc95.19 Carica papaya HOM05D006842 ORTHO05D008908 2.5e-18 97.4 319 74.3
Lalb_Chr11g0074851 Lupinus albus HOM05D006842 ORTHO05D008908 4.2e-18 96.7 409 61.9
Gorai.004G025400 Gossypium raimondii HOM05D006842 ORTHO05D008908 9.4e-18 95.5 401 62.8
Lj6g0009672 Lotus japonicus HOM05D006842 ORTHO05D008908 9.4e-18 95.5 415 59.5
ECA240G2145 Erigeron canadensis HOM05D006842 ORTHO05D008908 2.1e-17 94.4 383 64.0
HanXRQChr03g0068361 Helianthus annuus HOM05D006842 ORTHO05D008908 1.0e-16 92.0 378 64.3
Atru.chr8.567 Acer truncatum HOM05D006842 ORTHO05D008908 1.4e-16 91.7 317 72.2
Cc06_g21740 Coffea canephora HOM05D006842 ORTHO05D008908 1.4e-16 91.7 414 57.0
Sed0020865 Sechium edule HOM05D006842 ORTHO05D008908 2.3e-16 90.9 156 35.9
Prupe.1G077100 Prunus persica HOM05D006842 ORTHO05D008908 4.0e-16 90.1 157 35.7
CANSAT11G0234 Cannabis sativa HOM05D006842 ORTHO05D008908 1.2e-15 88.6 152 36.8
SGA_v2.0_scaffold231G43415 Striga asiatica HOM05D006842 ORTHO05D008908 1.5e-15 88.2 388 63.7
arahy.Tifrunner.gnm1.ann1.0YDK6Q Arachis hypogaea HOM05D006842 ORTHO05D008908 2.0e-15 87.8 411 59.6
arahy.Tifrunner.gnm1.ann1.25Z6GM Arachis hypogaea HOM05D006842 ORTHO05D008908 2.0e-15 87.8 411 59.9
Glyma.09G058502 Glycine max HOM05D006842 ORTHO05D008908 4.4e-15 86.7 157 36.9
Oeu018814.3 Olea europaea HOM05D006842 ORTHO05D008908 7.5e-15 85.9 149 40.9
Eucgr.D01013 Eucalyptus grandis HOM05D006842 ORTHO05D008908 9.8e-15 85.5 351 68.7
Peaxi162Scf00528g00082 Petunia axillaris HOM05D006842 ORTHO05D008908 9.8e-15 85.5 155 40.0
PGSC0003DMG400018607 Solanum tuberosum HOM05D006842 ORTHO05D008908 1.7e-14 84.7 136 41.9
Dinv25428 Davidia involucrata HOM05D006842 ORTHO05D008908 2.2e-14 84.3 144 39.6
Migut.L01888 Erythranthe guttata HOM05D006842 ORTHO05D008908 2.2e-14 84.3 401 60.8
Manes.14G159800 Manihot esculenta HOM05D006842 ORTHO05D008908 2.8e-14 84.0 150 35.3
AT5G57250 Arabidopsis thaliana HOM05D006842 ORTHO05D008908 3.7e-14 83.6 382 63.4
Sopen05g008190 Solanum pennellii HOM05D006842 ORTHO05D008908 4.8e-14 83.2 133 39.1
AL8G33220 Arabidopsis lyrata HOM05D006842 ORTHO05D008908 6.3e-14 82.8 388 62.9
ClCG11G011810 Citrullus lanatus HOM05D006842 ORTHO05D008908 6.3e-14 82.8 149 36.9
Nitab4.5_0007383g0050 Nicotiana tabacum HOM05D006842 ORTHO05D008908 8.3e-14 82.4 139 38.1
Phvul.009G237200 Phaseolus vulgaris HOM05D006842 ORTHO05D008908 8.3e-14 82.4 413 58.8
Solyc05g013400.4 Solanum lycopersicum HOM05D006842 ORTHO05D008908 1.1e-13 82.0 133 40.6
Carub.0008s1775 Capsella rubella HOM05D006842 ORTHO05D008908 1.4e-13 81.6 385 62.1
Glyma.15G164700 Glycine max HOM05D006842 ORTHO05D008908 1.4e-13 81.6 97 42.3
Lsat_1_v5_gn_7_55601 Lactuca sativa HOM05D006842 ORTHO05D008908 3.1e-13 80.5 384 40.4
VMungo1309G0481 Vigna mungo HOM05D006842 ORTHO05D008908 3.1e-13 80.5 408 58.6
CAN.G272.1 Capsicum annuum HOM05D006842 ORTHO05D008908 5.4e-13 79.7 133 42.1
Duzib170G0985 Durio zibethinus HOM05D006842 ORTHO05D008908 9.1e-13 79.0 95 41.1
MD16G1250600 Malus domestica HOM05D006842 ORTHO05D008908 1.2e-12 78.6 149 34.9
THA.LOC104811115 Tarenaya hassleriana HOM05D006842 ORTHO05D008908 2.0e-12 77.8 97 41.2
MELO3C003981.2 Cucumis melo HOM05D006842 ORTHO05D008908 2.7e-12 77.4 155 33.5
Hma1.2p1_0314F.1_g121750 Hydrangea macrophylla HOM05D006842 ORTHO05D008908 2.7e-12 77.4 66 56.1
Sp6g18980 Schrenkiella parvula HOM05D006842 ORTHO05D008908 2.7e-12 77.4 381 63.3
BcaB08g36087 Brassica carinata HOM05D006842 ORTHO05D008908 3.5e-12 77.0 125 37.6
Thhalv10012580m.g Eutrema salsugineum HOM05D006842 ORTHO05D008908 4.5e-12 76.6 381 63.0
SalBow5G4345 Salvia bowleyana HOM05D006842 ORTHO05D008908 4.5e-12 76.6 140 33.6
CsaV3_2G008680 Cucumis sativus L. HOM05D006842 ORTHO05D008908 2.3e-11 74.3 157 31.8
BolC9t57760H Brassica oleracea HOM05D006842 ORTHO05D008908 3.8e-11 73.6 125 36.8
RcHm_v2.0_Chr2g0131261 Rosa chinensis HOM05D006842 ORTHO05D008908 3.8e-11 73.6 97 34.0
BraA10t43553Z Brassica rapa HOM05D006842 ORTHO05D008908 5.0e-11 73.2 131 38.2
COL.COLO4_38436 Corchorus olitorius HOM05D006842 ORTHO05D008908 5.0e-11 73.2 64 56.2
Aqoxy7G02761 Aquilegia oxysepala HOM05D006842 ORTHO05D008908 1.1e-10 72.0 138 35.5
FAN07G2675 Fragaria x ananassa HOM05D006842 ORTHO05D008908 1.9e-10 71.2 97 35.1
Nitab4.5_0005943g0060 Nicotiana tabacum HOM05D006842 ORTHO05D008908 1.9e-10 71.2 132 40.2
PSO339G1909 Papaver somniferum HOM05D006842 ORTHO05D008908 1.9e-10 71.2 141 34.0
A10p14700 Brassica napus HOM05D006842 ORTHO05D008908 2.5e-10 70.9 131 37.4
BcaC04g19984 Brassica carinata HOM05D006842 ORTHO05D008908 4.2e-10 70.1 125 36.0
C09p49110 Brassica napus HOM05D006842 ORTHO05D008908 4.2e-10 70.1 125 36.0
CARHR271050 Cardamine hirsuta HOM05D006842 ORTHO05D008908 5.5e-10 69.7 128 38.3
MD13G1243700 Malus domestica HOM05D006842 ORTHO05D008908 5.5e-10 69.7 156 32.1
PSO384G3049 Papaver somniferum HOM05D006842 ORTHO05D008908 9.5e-10 68.9 141 34.0
Nn8g40884 Nelumbo nucifera HOM05D006842 ORTHO05D008908 8.0e-09 65.9 125 37.6
MBI13_g31535_MAGBIO Magnolia biondii HOM05D006842 ORTHO05D008908 2.3e-08 64.3 77 42.9
Nn8g40885 Nelumbo nucifera HOM05D006842 ORTHO05D008908 3.0e-08 63.9 92 32.6
Nitab4.5_0003261g0020 Nicotiana tabacum HOM05D006842 ORTHO05D008908 1.3e-06 58.5 41 58.5
Lj5P661T13 Lonicera japonica HOM05D006842 ORTHO05D008908 2.8e-06 57.4 71 45.1


User provided reference genes

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