Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 0.0e+00 1357.0 696 100.0
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 0.0e+00 1184.9 717 85.4
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 0.0e+00 1075.8 726 77.3
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.3e-296 1022.7 697 76.6
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 3.2e-282 974.9 710 70.6
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 3.2e-282 974.9 710 70.6
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.3e-280 969.5 703 71.3
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 1.8e-277 959.1 678 71.4
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 2.4e-277 958.7 701 71.0
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 2.6e-276 955.3 698 69.9
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 1.9e-274 949.1 669 72.6
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 1.3e-270 936.4 703 68.1
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 1.2e-268 929.9 709 67.8
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 1.5e-268 929.5 705 69.1
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 3.4e-268 928.3 707 68.7
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 7.6e-268 927.2 695 68.9
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 9.9e-268 926.8 684 69.7
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 9.9e-268 926.8 704 68.8
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 1.3e-267 926.4 714 67.1
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 1.3e-267 926.4 705 68.5
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 2.2e-267 925.6 709 67.8
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 6.4e-267 924.1 709 68.0
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 1.9e-266 922.5 701 68.8
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 3.2e-266 921.8 689 69.2
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 2.7e-265 918.7 696 68.7
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 3.5e-265 918.3 695 68.6
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 6.0e-265 917.5 714 67.4
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 1.0e-264 916.8 678 70.8
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 6.7e-264 914.1 663 69.7
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 6.7e-264 914.1 708 67.1
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.1e-263 913.3 702 67.7
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 1.5e-263 912.9 697 68.1
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 1.5e-263 912.9 702 67.7
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.5e-263 912.9 707 67.6
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 1.9e-263 912.5 692 67.6
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 4.3e-263 911.4 667 68.7
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 9.6e-263 910.2 696 69.0
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.3e-262 909.8 661 69.4
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 1.6e-262 909.4 695 67.5
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 1.6e-262 909.4 691 68.9
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 2.8e-262 908.7 710 66.5
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 6.9e-261 904.0 691 68.5
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 3.4e-260 901.7 682 68.5
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 4.5e-260 901.4 699 67.0
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 9.9e-260 900.2 671 68.4
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 1.3e-259 899.8 702 66.7
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 2.2e-259 899.0 670 68.5
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 2.2e-259 899.0 683 67.9
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 3.8e-259 898.3 720 65.7
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 3.2e-258 895.2 703 66.9
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 3.5e-257 891.7 673 67.8
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 3.5e-257 891.7 718 64.5
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 1.8e-256 889.4 697 66.6
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 2.3e-256 889.0 671 68.7
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 4.3e-255 884.8 715 66.0
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 5.6e-255 884.4 696 66.1
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 9.6e-255 883.6 673 67.6
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 2.1e-254 882.5 681 66.7
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 3.7e-254 881.7 714 65.4
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 3.7e-254 881.7 716 65.6
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 4.8e-254 881.3 702 65.8
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 1.8e-253 879.4 713 65.5
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 2.0e-252 875.9 707 65.5
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 2.6e-252 875.5 708 65.1
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 2.2e-251 872.5 703 65.4
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 4.9e-251 871.3 704 65.9
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 8.4e-251 870.5 704 65.9
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 4.2e-250 868.2 698 65.6
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 3.9e-248 861.7 664 68.1
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 5.1e-248 861.3 675 66.1
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 6.7e-248 860.9 671 66.8
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 1.1e-247 860.1 614 72.1
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 4.3e-247 858.2 690 65.1
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 7.4e-247 857.4 752 62.4
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.8e-245 852.8 733 63.0
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.7e-243 846.3 690 64.2
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 6.5e-243 844.3 593 71.2
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 8.5e-243 844.0 673 65.4
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 3.0e-240 835.5 682 63.6
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 1.5e-239 833.2 621 69.1
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 6.9e-237 824.3 689 65.0
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 1.7e-235 819.7 670 65.2
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 2.9e-235 818.9 683 63.3
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 1.4e-234 816.6 598 69.1
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 2.4e-229 799.3 686 63.8
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 7.7e-228 794.3 594 68.5
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 1.4e-221 773.5 656 61.7
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 1.2e-220 770.4 573 68.1
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 1.2e-212 743.8 616 63.8
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 8.0e-209 731.1 546 68.7
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 5.4e-189 665.2 1250 36.6
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 8.0e-185 651.4 630 56.2
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 6.4e-182 641.7 611 55.6
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 4.1e-181 639.0 618 55.7
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 3.3e-178 629.4 657 51.9
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 3.3e-170 602.8 426 71.1
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 2.1e-161 573.5 303 96.4
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 2.6e-159 566.6 400 71.5
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 4.0e-152 542.7 424 68.2
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 4.2e-149 532.7 401 65.8
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 1.6e-137 494.2 718 42.8
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 4.2e-133 479.6 606 46.5
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 2.8e-129 466.8 474 52.3
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.6e-124 451.1 332 68.1
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.3e-105 388.3 203 98.5
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 4.8e-105 386.3 273 69.6
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.4e-96 358.2 225 79.1
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 9.4e-93 345.5 461 46.4
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.0e-91 342.0 307 61.9
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 8.3e-81 305.8 203 74.4
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 1.0e-75 288.9 282 58.5
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.6e-71 275.0 620 33.4
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 7.8e-71 272.7 255 60.0
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 3.7e-57 227.3 155 71.6
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 7.1e-48 196.4 157 64.3
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 2.1e-44 184.9 145 64.1
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 1.7e-38 165.2 203 49.8
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 9.3e-32 142.9 102 70.6
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 3.8e-25 120.9 140 49.3
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.3e-22 111.7 97 60.8
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 9.6e-21 106.3 111 59.5
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 6.2e-20 103.6 112 58.9
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 6.5e-17 93.6 51 82.4
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 5.5e-16 90.5 149 41.6
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 7.9e-15 86.7 68 63.2
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 1.5e-10 72.4 68 54.4


User provided reference genes

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