Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028339 Chenopodium quinoa HOM05D003426 ORTHO05D003816 1.9e-268 928.7 515 100.0
AUR62025323 Chenopodium quinoa HOM05D003426 ORTHO05D003816 2.9e-240 835.1 506 92.7
EL10Ac8g18943 Beta vulgaris HOM05D003426 ORTHO05D003816 8.7e-128 461.5 521 55.5
Ah.09g228830 Amaranthus hybridus HOM05D006517 ORTHO05D007886 3.3e-82 310.1 437 48.1
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 2.3e-80 303.9 423 48.0
TAR626G1511 Trochodendron aralioides HOM05D003426 ORTHO05D003816 3.2e-45 187.2 463 36.3
Cfa020810 Carpinus fangiana HOM05D003426 ORTHO05D003816 5.4e-45 186.4 451 35.7
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 1.2e-44 185.3 487 35.1
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 3.5e-44 183.7 424 36.1
Lj9C718T11 Lonicera japonica HOM05D003426 ORTHO05D003816 1.9e-42 177.9 446 35.2
Actinidia23556 Actinidia chinensis HOM05D003426 ORTHO05D003816 2.8e-41 174.1 441 33.8
Hma1.2p1_0028F.1_g017630 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 2.8e-41 174.1 440 33.4
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 2.8e-41 174.1 449 35.0
Peaxi162Scf00401g00417 Petunia axillaris HOM05D003426 ORTHO05D003816 7.6e-39 166.0 392 37.0
Haze_19169 Corylus avellana HOM05D003426 ORTHO05D003816 1.3e-38 165.2 487 32.9
Cc06_g14810 Coffea canephora HOM05D003426 ORTHO05D003816 2.9e-38 164.1 424 36.8
Oeu026460.1 Olea europaea HOM05D003426 ORTHO05D003816 2.9e-38 164.1 406 36.0
Rhsim01G0028100 Rhododendron simsii HOM05D003426 ORTHO05D003816 6.4e-38 162.9 402 35.8
Sopen07g001810 Solanum pennellii HOM05D003426 ORTHO05D003816 6.4e-38 162.9 490 32.9
Solyc07g005700.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 1.9e-37 161.4 465 34.2
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 2.4e-37 161.0 457 33.7
CiPaw.15G166800 Carya illinoinensis HOM05D003426 ORTHO05D003816 3.2e-37 160.6 405 33.1
CAN.G160.49 Capsicum annuum HOM05D003426 ORTHO05D003816 9.3e-37 159.1 471 33.5
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 2.1e-36 157.9 425 35.3
MSTRG.6152 Avicennia marina HOM05D003426 ORTHO05D003816 2.1e-36 157.9 405 34.8
TAR636G1172 Trochodendron aralioides HOM05D003426 ORTHO05D003816 2.7e-36 157.5 323 39.6
PGSC0003DMG400011187 Solanum tuberosum HOM05D003426 ORTHO05D003816 6.0e-36 156.4 484 31.8
vmacro16795 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 6.0e-36 156.4 429 35.2
MD15G1151400 Malus domestica HOM05D003426 ORTHO05D003816 1.3e-35 155.2 442 34.4
Cpa.g.sc46.169 Carica papaya HOM05D003426 ORTHO05D003816 5.1e-35 153.3 409 35.2
Nn2g12424 Nelumbo nucifera HOM05D003426 ORTHO05D003816 5.1e-35 153.3 456 32.7
Thecc.09G028500 Theobroma cacao HOM05D003426 ORTHO05D003816 2.5e-34 151.0 405 32.1
Manes.06G035400 Manihot esculenta HOM05D003426 ORTHO05D003816 1.3e-33 148.7 401 33.4
HanXRQChr05g0144001 Helianthus annuus HOM05D003426 ORTHO05D003816 4.8e-33 146.7 376 34.6
Atru.chr7.23 Acer truncatum HOM05D003426 ORTHO05D003816 5.3e-32 143.3 475 32.8
Oeu021305.2 Olea europaea HOM05D003426 ORTHO05D003816 6.9e-32 142.9 384 33.3
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 9.0e-32 142.5 453 32.5
Lsat_1_v5_gn_8_63641 Lactuca sativa HOM05D003426 ORTHO05D003816 2.0e-31 141.4 453 31.6
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 2.6e-31 141.0 388 33.8
MD02G1006400 Malus domestica HOM05D003426 ORTHO05D003816 2.6e-31 141.0 398 34.9
CiPaw.16G108300 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.7e-30 138.3 462 30.7
Actinidia38667 Actinidia chinensis HOM05D003426 ORTHO05D003816 2.2e-30 137.9 336 36.6
COL.COLO4_18823 Corchorus olitorius HOM05D003426 ORTHO05D003816 4.9e-30 136.7 435 30.3
Actinidia38316 Actinidia chinensis HOM05D003426 ORTHO05D003816 6.4e-30 136.3 462 31.8
PGR142G3879 Punica granatum HOM05D003426 ORTHO05D003816 2.4e-29 134.4 446 31.2
Sc18g0002970 Simmondsia chinensis HOM05D003426 ORTHO05D003816 7.1e-29 132.9 459 29.8
Nitab4.5_0001571g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 1.2e-28 132.1 475 29.9
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 2.1e-28 131.3 426 33.1
Manes.14G144800 Manihot esculenta HOM05D003426 ORTHO05D003816 4.6e-28 130.2 462 32.0
Aqoxy7G03377 Aquilegia oxysepala HOM05D003426 ORTHO05D003816 1.3e-27 128.6 434 31.8
Nn8g39953 Nelumbo nucifera HOM05D003426 ORTHO05D003816 1.3e-27 128.6 439 32.8
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 1.8e-27 128.3 548 27.7
SalBow1G0569 Salvia bowleyana HOM05D003426 ORTHO05D003816 1.1e-26 125.6 369 35.2
Eucgr.C00251 Eucalyptus grandis HOM05D003426 ORTHO05D003816 2.8e-25 120.9 438 28.1
CANSAT11G1136 Cannabis sativa HOM05D003426 ORTHO05D003816 4.8e-25 120.2 431 30.6
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.1e-24 119.0 271 36.2
PSO561G0041 Papaver somniferum HOM05D003426 ORTHO05D003816 1.8e-24 118.2 467 28.3
Prupe.7G264500 Prunus persica HOM05D003426 ORTHO05D003816 1.8e-24 118.2 357 31.1
Hma1.2p1_2680F.1_g326790 Hydrangea macrophylla HOM05D003426 ORTHO05D003816 9.0e-24 115.9 226 38.5
Glyma.17G073000 Glycine max HOM05D003426 ORTHO05D003816 1.1e-21 109.0 410 31.0
Nitab4.5_0005869g0080 Nicotiana tabacum HOM05D003426 ORTHO05D003816 3.2e-21 107.5 235 35.3
PSO111G0039 Papaver somniferum HOM05D003426 ORTHO05D003816 3.2e-21 107.5 476 28.2
MD17G1259500 Malus domestica HOM05D003426 ORTHO05D003816 2.7e-20 104.4 424 28.8
SGA_v2.0_scaffold265G46098 Striga asiatica HOM05D003426 ORTHO05D003816 2.7e-20 104.4 371 32.6
Glyma.17G072900 Glycine max HOM05D003426 ORTHO05D003816 3.5e-20 104.0 409 29.6
Sed0021282 Sechium edule HOM05D003426 ORTHO05D003816 3.5e-20 104.0 398 30.7
FAN26G0769 Fragaria x ananassa HOM05D003426 ORTHO05D003816 4.6e-20 103.6 479 26.7
Ca_21135_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 6.0e-20 103.2 462 26.2
Ca_21137_v3 Cicer arietinum L. HOM05D003426 ORTHO05D003816 6.0e-20 103.2 462 26.2
CSS0027727 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 1.3e-19 102.1 209 41.6
PSO210G1729 Papaver somniferum HOM05D003426 ORTHO05D003816 2.3e-19 101.3 434 27.4
THA.LOC104803917 Tarenaya hassleriana HOM05D003426 ORTHO05D003816 8.7e-19 99.4 338 28.1
CsaV3_2G007580 Cucumis sativus L. HOM05D003426 ORTHO05D003816 1.1e-18 99.0 377 27.6
FAN23G3106 Fragaria x ananassa HOM05D003426 ORTHO05D003816 1.1e-18 99.0 515 24.9
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 1.1e-18 99.0 338 29.0
PGSC0003DMG400036381 Solanum tuberosum HOM05D003426 ORTHO05D003816 2.5e-18 97.8 320 30.6
MBI14_g30955_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 5.7e-18 96.7 450 30.2
RcHm_v2.0_Chr2g0085511 Rosa chinensis HOM05D003426 ORTHO05D003816 7.4e-18 96.3 464 27.8
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 9.6e-18 95.9 338 28.4
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 9.6e-18 95.9 338 28.4
PSO210G2240 Papaver somniferum HOM05D003426 ORTHO05D003816 9.6e-18 95.9 446 27.1
Lalb_Chr13g0300811 Lupinus albus HOM05D003426 ORTHO05D003816 1.3e-17 95.5 298 32.2
TAR625G0621 Trochodendron aralioides HOM05D003426 ORTHO05D003816 1.3e-17 95.5 422 27.0
Rhsim03G0257700 Rhododendron simsii HOM05D003426 ORTHO05D003816 1.6e-17 95.1 334 30.2
Migut.J01365 Erythranthe guttata HOM05D003426 ORTHO05D003816 2.8e-17 94.4 399 29.6
ClCG02G014420 Citrullus lanatus HOM05D003426 ORTHO05D003816 4.8e-17 93.6 354 27.7
Glyma.02G205001 Glycine max HOM05D003426 ORTHO05D003816 1.1e-16 92.4 410 27.8
Lj4g0000658 Lotus japonicus HOM05D003426 ORTHO05D003816 1.8e-16 91.7 434 27.4
arahy.Tifrunner.gnm1.ann1.H6N2T4 Arachis hypogaea HOM05D003426 ORTHO05D003816 4.1e-16 90.5 356 30.1
Phvul.003G155200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 5.3e-16 90.1 409 28.9
Dinv08190 Davidia involucrata HOM05D003426 ORTHO05D003816 9.0e-16 89.4 411 29.0
MELO3C010212.2 Cucumis melo HOM05D003426 ORTHO05D003816 2.6e-15 87.8 345 27.8
Glyma.17G072650 Glycine max HOM05D003426 ORTHO05D003816 2.6e-15 87.8 223 35.4
FAN28G0527 Fragaria x ananassa HOM05D003426 ORTHO05D003816 3.4e-15 87.4 514 26.5
arahy.Tifrunner.gnm1.ann1.N5DK6E Arachis hypogaea HOM05D003426 ORTHO05D003816 7.6e-15 86.3 349 28.4
PGSC0003DMG400040160 Solanum tuberosum HOM05D003426 ORTHO05D003816 7.6e-15 86.3 323 29.4
CiPaw.16G108200 Carya illinoinensis HOM05D003426 ORTHO05D003816 1.0e-14 85.9 264 31.8
DCAR_019401 Daucus carota HOM05D003426 ORTHO05D003816 1.3e-14 85.5 195 34.9
FvH4_1g00800 Fragaria vesca HOM05D003426 ORTHO05D003816 1.3e-14 85.5 422 25.8
Glyma.17G184200 Glycine max HOM05D003426 ORTHO05D003816 1.7e-14 85.1 408 27.0
ClCG06G012490 Citrullus lanatus HOM05D003426 ORTHO05D003816 3.8e-14 84.0 339 27.7
Actinidia10526 Actinidia chinensis HOM05D003426 ORTHO05D003816 5.0e-14 83.6 397 27.7
PGSC0003DMG400011188 Solanum tuberosum HOM05D003426 ORTHO05D003816 5.0e-14 83.6 149 38.9
Lalb_Chr12g0198761 Lupinus albus HOM05D003426 ORTHO05D003816 6.5e-14 83.2 447 26.6
Lj4g0006994 Lotus japonicus HOM05D003426 ORTHO05D003816 8.4e-14 82.8 397 27.7
MELO3C004128.2 Cucumis melo HOM05D003426 ORTHO05D003816 1.4e-13 82.0 363 29.2
vmacro06066 Vaccinium macrocarpon HOM05D003426 ORTHO05D003816 1.9e-13 81.6 232 33.2
Glyma.17G072800 Glycine max HOM05D003426 ORTHO05D003816 2.5e-13 81.3 287 32.1
Lj7P460T26 Lonicera japonica HOM05D003426 ORTHO05D003816 2.5e-13 81.3 260 29.6
ECA234G0256 Erigeron canadensis HOM05D003426 ORTHO05D003816 4.2e-13 80.5 236 33.1
Solyc10g048140.2 Solanum lycopersicum HOM05D003426 ORTHO05D003816 4.2e-13 80.5 184 35.9
Dinv17422 Davidia involucrata HOM05D003426 ORTHO05D003816 7.2e-13 79.7 218 31.7
Sopen07g001820 Solanum pennellii HOM05D003426 ORTHO05D003816 7.2e-13 79.7 114 50.0
MBI15_g18232_MAGBIO Magnolia biondii HOM05D003426 ORTHO05D003816 9.3e-13 79.3 273 30.8
PGSC0003DMG400040189 Solanum tuberosum HOM05D003426 ORTHO05D003816 9.3e-13 79.3 194 36.6
QL02p093542 Quercus lobata HOM05D001418 ORTHO05D002038 1.2e-12 79.0 101 43.6
Psat4g009920 Pisum sativum HOM05D003426 ORTHO05D003816 1.6e-12 78.6 78 53.8
Sopen10g019310 Solanum pennellii HOM05D003426 ORTHO05D003816 2.7e-12 77.8 184 35.3
AUR62024799 Chenopodium quinoa HOM05D016866 ORTHO05D003816 3.5e-12 77.4 434 26.7
Actinidia01424 Actinidia chinensis HOM05D003426 ORTHO05D003816 6.1e-12 76.6 220 35.0
Medtr3g045840 Medicago truncatula HOM05D003426 ORTHO05D003816 7.9e-12 76.3 198 34.8
PGSC0003DMG400037110 Solanum tuberosum HOM05D003426 ORTHO05D003816 1.0e-11 75.9 174 32.8
GSVIVG01023627001 Vitis vinifera HOM05D003426 ORTHO05D003816 1.0e-11 75.9 239 35.6
QL02p093534 Quercus lobata HOM05D003426 ORTHO05D003816 3.0e-11 74.3 123 50.4
Nitab4.5_0000123g0610 Nicotiana tabacum HOM05D003426 ORTHO05D007302 3.9e-11 73.9 182 27.5
SGA_v2.0_scaffold1435G53950 Striga asiatica HOM05D003426 ORTHO05D003816 5.1e-11 73.6 257 28.4
VMungo1215G0444 Vigna mungo HOM05D003426 ORTHO05D003816 5.1e-11 73.6 419 27.2
HanXRQChr10g0313661 Helianthus annuus HOM05D003426 ORTHO05D003816 6.7e-11 73.2 184 31.5
Glyma.17G193101 Glycine max HOM05D003426 ORTHO05D003816 1.9e-10 71.6 193 33.2
Rhsim02G0212600 Rhododendron simsii HOM05D003426 ORTHO05D003816 3.3e-10 70.9 406 27.6
Lsat_1_v5_gn_5_90301 Lactuca sativa HOM05D003426 ORTHO05D003816 4.3e-10 70.5 348 27.6
Medtr4g129690 Medicago truncatula HOM05D003426 ORTHO05D003816 4.3e-10 70.5 100 38.0
Phvul.010G050200 Phaseolus vulgaris HOM05D003426 ORTHO05D003816 7.4e-10 69.7 236 31.4
Sed0007563 Sechium edule HOM05D003426 ORTHO05D003816 7.4e-10 69.7 326 26.4
QL02p093555 Quercus lobata HOM05D003426 ORTHO05D003816 9.7e-10 69.3 127 46.5
Psat6g228520 Pisum sativum HOM05D003426 ORTHO05D003816 1.3e-09 68.9 64 53.1
CDE02G2039 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 1.6e-09 68.6 353 24.9
Psat4g009680 Pisum sativum HOM05D003426 ORTHO05D003816 1.6e-09 68.6 64 54.7
Psat4g010040 Pisum sativum HOM05D003426 ORTHO05D003816 1.6e-09 68.6 241 29.9
Medtr4g130690 Medicago truncatula HOM05D003426 ORTHO05D003816 2.2e-09 68.2 271 30.3
Ciclev10032854m.g Citrus clementina HOM05D003426 ORTHO05D003816 8.2e-09 66.2 213 36.6
SGA_v2.0_scaffold96G29076 Striga asiatica HOM05D003426 ORTHO05D003816 8.2e-09 66.2 231 28.1
PSO675G1450 Papaver somniferum HOM05D003426 ORTHO05D003816 1.4e-08 65.5 270 26.7
Lsat_1_v5_gn_5_89740 Lactuca sativa HOM05D003426 ORTHO05D003816 2.4e-08 64.7 209 31.6
ATR0580G137 Amborella trichopoda HOM05D003426 ORTHO05D003816 5.3e-08 63.5 261 26.8
TPR.G24886 Trifolium pratense HOM05D003426 ORTHO05D003816 9.0e-08 62.8 137 35.8
PSO675G7028 Papaver somniferum HOM05D003426 ORTHO05D003816 1.5e-07 62.0 217 29.0
CSS0012807 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 3.4e-07 60.8 234 32.1
Solyc07g005710.3 Solanum lycopersicum HOM05D003426 ORTHO05D003816 3.4e-07 60.8 90 47.8
TWI59G0327 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 4.5e-07 60.5 208 24.0
Cpa.g.sc20.26 Carica papaya HOM05D000650 ORTHO05D000735 5.9e-07 60.1 238 23.9
CDE05G1528 Ceratophyllum demersum HOM05D051348 ORTHO05D003816 5.9e-07 60.1 427 25.3
CAN.G930.15 Capsicum annuum HOM05D003426 ORTHO05D003816 1.0e-06 59.3 129 38.0
QL02p018764 Quercus lobata HOM05D003426 ORTHO05D003816 1.0e-06 59.3 178 29.8
Actinidia02402 Actinidia chinensis HOM05D000650 ORTHO05D007302 1.3e-06 58.9 165 30.3
EL10Ac2g02492 Beta vulgaris HOM05D016866 ORTHO05D003816 1.3e-06 58.9 423 22.5
AUR62032422 Chenopodium quinoa HOM05D016866 ORTHO05D003816 1.7e-06 58.5 256 25.0
Phvul.002G214600 Phaseolus vulgaris HOM05D000650 ORTHO05D007302 1.7e-06 58.5 209 25.4
Prupe.8G073000 Prunus persica HOM05D000650 ORTHO05D007302 1.7e-06 58.5 154 29.2
Hund02984 Selenicereus undatus HOM05D016866 ORTHO05D015160 2.2e-06 58.2 221 26.7
TWI14G0488 Tripterygium wilfordii HOM05D000650 ORTHO05D007302 3.8e-06 57.4 159 25.2
Thhalv10000536m.g Eutrema salsugineum HOM05D012895 ORTHO05D014428 5.0e-06 57.0 368 24.2
Duzib132G0086 Durio zibethinus HOM05D000650 ORTHO05D007302 6.5e-06 56.6 230 23.0
Lsat_1_v5_gn_5_90221 Lactuca sativa HOM05D029854 ORTHO05D003816 6.5e-06 56.6 338 22.2
Nitab4.5_0002290g0120 Nicotiana tabacum HOM05D003426 ORTHO05D003816 6.5e-06 56.6 173 28.9
Rhsim07G0165800 Rhododendron simsii HOM05D022929 ORTHO05D050680 8.5e-06 56.2 223 28.7
RcHm_v2.0_Chr6g0270191 Rosa chinensis HOM05D000650 ORTHO05D007302 8.5e-06 56.2 77 42.9
GSVIVG01016047001 Vitis vinifera HOM05D003426 ORTHO05D003816 8.5e-06 56.2 44 56.8


User provided reference genes

Program Settings