Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 9.1e-181 636.7 309 100.0
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 3.7e-174 614.8 309 95.8
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 3.0e-139 498.8 332 76.2
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 1.5e-119 433.3 332 67.2
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 2.5e-101 372.9 302 61.3
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 4.6e-100 368.6 289 64.0
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 4.6e-100 368.6 258 70.5
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 7.9e-100 367.9 287 64.1
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 1.3e-99 367.1 258 70.2
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.8e-99 366.7 258 69.8
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 8.7e-99 364.4 282 63.5
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 1.1e-98 364.0 297 62.0
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 1.1e-98 364.0 194 83.5
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 1.1e-98 364.0 307 61.9
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 1.5e-98 363.6 306 60.5
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 4.3e-98 362.1 308 61.7
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 5.7e-98 361.7 294 60.9
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 9.6e-98 360.9 283 64.7
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 3.7e-97 359.0 223 74.9
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 6.2e-97 358.2 291 61.9
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 8.2e-97 357.8 315 59.7
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 6.9e-96 354.8 285 62.1
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 9.0e-96 354.4 276 63.4
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 2.0e-95 353.2 286 60.1
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 5.8e-95 351.7 193 82.4
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 5.8e-95 351.7 293 61.4
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 5.8e-95 351.7 194 82.0
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 1.3e-94 350.5 194 81.4
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 2.2e-94 349.7 313 61.0
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 2.9e-94 349.4 194 80.9
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.9e-94 349.4 194 80.9
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.9e-94 349.4 194 80.9
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 5.0e-94 348.6 321 60.1
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 6.5e-94 348.2 194 80.9
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 1.1e-93 347.4 194 80.9
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 3.2e-93 345.9 194 79.9
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 3.2e-93 345.9 281 60.5
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 4.2e-93 345.5 194 81.4
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 5.5e-93 345.1 190 82.1
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 1.2e-92 344.0 291 60.8
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 1.2e-92 344.0 281 61.6
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 1.6e-92 343.6 194 79.9
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.6e-92 343.6 192 80.2
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 2.7e-92 342.8 194 78.9
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 3.5e-92 342.4 320 56.2
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 6.1e-92 341.7 194 81.4
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.0e-91 340.9 264 64.8
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 1.3e-91 340.5 223 70.9
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.3e-91 340.5 264 64.4
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 1.8e-91 340.1 278 61.9
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 1.8e-91 340.1 330 54.8
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.3e-91 339.7 198 76.3
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 2.3e-91 339.7 310 58.4
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 2.3e-91 339.7 278 60.4
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 3.0e-91 339.3 278 61.9
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 3.9e-91 339.0 261 65.1
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 5.1e-91 338.6 302 57.9
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 6.7e-91 338.2 194 80.9
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 6.7e-91 338.2 194 79.9
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 8.7e-91 337.8 194 78.9
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 8.7e-91 337.8 289 57.4
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 1.1e-90 337.4 234 67.5
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 1.1e-90 337.4 234 67.5
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 1.1e-90 337.4 233 67.4
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.1e-90 337.4 194 80.4
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.1e-90 337.4 192 79.7
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 1.9e-90 336.7 291 59.1
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 2.5e-90 336.3 195 78.5
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 2.5e-90 336.3 195 76.9
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 2.5e-90 336.3 194 79.4
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 2.5e-90 336.3 194 80.4
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 3.3e-90 335.9 195 77.9
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 3.3e-90 335.9 190 81.1
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 3.3e-90 335.9 289 59.9
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 4.3e-90 335.5 283 61.5
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 5.7e-90 335.1 278 59.7
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 1.3e-89 334.0 192 77.6
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 1.3e-89 334.0 192 78.6
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 1.6e-89 333.6 192 80.2
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 1.6e-89 333.6 192 77.6
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 2.2e-89 333.2 277 58.8
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 2.8e-89 332.8 192 78.1
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 2.8e-89 332.8 222 70.3
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 6.3e-89 331.6 192 77.6
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 8.2e-89 331.3 196 75.5
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 1.1e-88 330.9 195 75.4
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 1.8e-88 330.1 194 77.3
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 1.8e-88 330.1 194 77.3
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 1.8e-88 330.1 194 77.3
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 1.8e-88 330.1 242 66.5
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 3.1e-88 329.3 192 76.0
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 4.1e-88 328.9 284 59.2
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 5.3e-88 328.6 282 56.0
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 9.0e-88 327.8 194 75.8
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 9.0e-88 327.8 291 57.0
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 9.0e-88 327.8 194 77.8
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 1.2e-87 327.4 299 56.2
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 1.2e-87 327.4 296 57.8
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 1.5e-87 327.0 195 74.9
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 1.5e-87 327.0 279 56.3
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 1.0e-86 324.3 194 76.8
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 1.3e-86 323.9 195 74.4
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.7e-86 323.6 220 70.9
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 1.7e-86 323.6 192 75.0
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 2.9e-86 322.8 194 77.3
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 1.1e-85 320.9 279 57.3
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 3.6e-84 315.8 190 75.3
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 3.6e-84 315.8 190 75.8
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 2.3e-83 313.2 190 73.7
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 6.7e-83 311.6 196 73.5
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.5e-82 309.7 298 52.7
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 7.4e-82 308.1 195 68.7
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 8.2e-81 304.7 188 72.9
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.8e-80 303.5 291 52.9
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 7.7e-79 298.1 188 71.3
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 1.0e-78 297.7 309 53.1
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 4.4e-74 282.3 263 55.5
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 8.2e-73 278.1 194 63.4
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 4.1e-72 275.8 162 73.5
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 5.9e-71 271.9 160 73.8
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 7.7e-71 271.6 161 74.5
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 7.7e-71 271.6 257 51.0
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 1.0e-67 261.2 188 61.2
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 3.7e-65 252.7 150 73.3
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 1.3e-62 244.2 144 76.4
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 3.2e-61 239.6 156 74.4
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 7.2e-61 238.4 205 60.0
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 1.5e-58 230.7 126 83.3
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 2.0e-58 230.3 214 57.5
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 1.8e-56 223.8 191 55.0
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 5.2e-51 205.7 121 71.1
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 9.5e-45 184.9 156 57.7
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 7.0e-40 168.7 160 48.8
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 3.4e-26 123.2 104 51.0
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 5.4e-24 115.9 83 55.4
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 1.1e-16 91.7 137 42.3
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 4.1e-16 89.7 71 64.8
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 1.1e-13 81.6 182 36.3
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.5e-13 80.5 57 68.4
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 3.8e-09 66.6 150 38.7
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 2.4e-08 63.9 34 85.3
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 1.2e-07 61.6 86 45.3
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 2.1e-07 60.8 38 76.3
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 1.7e-06 57.8 95 40.0


User provided reference genes

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