Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028306 Chenopodium quinoa HOM05D004597 ORTHO05D005629 9.7e-121 436.8 216 100.0
EL10Ac8g18994 Beta vulgaris HOM05D004597 ORTHO05D005629 2.8e-104 382.1 216 88.9
Ah.09g229020 Amaranthus hybridus HOM05D004597 ORTHO05D005629 4.2e-100 368.2 216 85.6
Hund08871 Selenicereus undatus HOM05D004597 ORTHO05D005629 3.1e-95 352.1 216 81.5
Sc18g0002790 Simmondsia chinensis HOM05D004597 ORTHO05D005629 1.0e-90 337.0 217 79.3
Atru.chr7.1756 Acer truncatum HOM05D004597 ORTHO05D005629 1.5e-89 333.2 216 77.3
SalBow6G0240 Salvia bowleyana HOM05D004597 ORTHO05D005629 4.4e-89 331.6 217 78.8
Oeu028117.1 Olea europaea HOM05D004597 ORTHO05D005629 6.3e-88 327.8 215 78.1
Haze_26057 Corylus avellana HOM05D004597 ORTHO05D005629 8.3e-88 327.4 216 75.9
Eucgr.C00774 Eucalyptus grandis HOM05D004597 ORTHO05D005629 8.3e-88 327.4 214 77.1
Prupe.7G193200 Prunus persica HOM05D004597 ORTHO05D005629 8.3e-88 327.4 217 74.7
vmacro17088 Vaccinium macrocarpon HOM05D004597 ORTHO05D005629 8.3e-88 327.4 219 74.4
Ciclev10009453m.g Citrus clementina HOM05D004597 ORTHO05D005629 1.8e-87 326.2 216 75.5
Potri.006G137500 Populus trichocarpa HOM05D004597 ORTHO05D005629 4.1e-87 325.1 216 74.1
Sabra06G0107600 Salix brachista HOM05D004597 ORTHO05D005629 5.4e-87 324.7 216 74.1
Manes.16G091900 Manihot esculenta HOM05D004597 ORTHO05D005629 7.0e-87 324.3 218 74.8
Cfa002950 Carpinus fangiana HOM05D004597 ORTHO05D005629 9.1e-87 323.9 216 74.1
CiPaw.03G201900 Carya illinoinensis HOM05D004597 ORTHO05D005629 1.2e-86 323.6 216 74.5
Dinv25516 Davidia involucrata HOM05D004597 ORTHO05D005629 1.2e-86 323.6 218 75.2
Nitab4.5_0001699g0010 Nicotiana tabacum HOM05D004597 ORTHO05D005629 1.6e-86 323.2 217 73.3
Cc06_g12610 Coffea canephora HOM05D004597 ORTHO05D005629 2.0e-86 322.8 216 75.9
Migut.J00892 Erythranthe guttata HOM05D004597 ORTHO05D005629 2.7e-86 322.4 217 77.4
CANSAT56G1179 Cannabis sativa HOM05D004597 ORTHO05D005629 3.5e-86 322.0 216 74.5
Potri.018G063300 Populus trichocarpa HOM05D004597 ORTHO05D005629 3.5e-86 322.0 216 73.6
Thecc.09G071400 Theobroma cacao HOM05D004597 ORTHO05D005629 3.5e-86 322.0 216 74.1
TWI32G1285 Tripterygium wilfordii HOM05D004597 ORTHO05D005629 4.5e-86 321.6 216 73.6
QL11p002680 Quercus lobata HOM05D004597 ORTHO05D005629 7.7e-86 320.9 218 73.4
PGSC0003DMG400013551 Solanum tuberosum HOM05D004597 ORTHO05D005629 1.0e-85 320.5 218 74.8
Peaxi162Scf00191g00102 Petunia axillaris HOM05D004597 ORTHO05D005629 1.7e-85 319.7 219 73.5
Sopen07g022070 Solanum pennellii HOM05D004597 ORTHO05D005629 2.9e-85 318.9 218 74.3
CAN.G210.7 Capsicum annuum HOM05D004597 ORTHO05D005629 3.8e-85 318.5 217 74.2
Nitab4.5_0007540g0030 Nicotiana tabacum HOM05D004597 ORTHO05D005629 5.0e-85 318.2 217 74.2
Sabra18G0056100 Salix brachista HOM05D004597 ORTHO05D005629 5.0e-85 318.2 216 73.6
MSTRG.26494 Avicennia marina HOM05D004597 ORTHO05D005629 6.5e-85 317.8 216 74.5
Nn6g35647 Nelumbo nucifera HOM05D004597 ORTHO05D005629 6.5e-85 317.8 216 73.6
RcHm_v2.0_Chr2g0095781 Rosa chinensis HOM05D004597 ORTHO05D005629 6.5e-85 317.8 216 74.1
Solyc07g042440.3 Solanum lycopersicum HOM05D004597 ORTHO05D005629 8.5e-85 317.4 218 73.9
COL.COLO4_21219 Corchorus olitorius HOM05D004597 ORTHO05D005629 1.1e-84 317.0 217 73.7
MSTRG.19433 Avicennia marina HOM05D004597 ORTHO05D005629 1.9e-84 316.2 215 75.3
Oeu055329.1 Olea europaea HOM05D004597 ORTHO05D005629 1.9e-84 316.2 215 76.7
ClCG08G002020 Citrullus lanatus HOM05D004597 ORTHO05D005629 3.2e-84 315.5 226 71.7
GSVIVG01015027001 Vitis vinifera HOM05D004597 ORTHO05D005629 9.4e-84 313.9 216 71.8
FAN26G3440 Fragaria x ananassa HOM05D004597 ORTHO05D005629 1.2e-83 313.5 216 71.8
Rhsim08G0029600 Rhododendron simsii HOM05D004597 ORTHO05D005629 1.6e-83 313.2 218 72.0
Sed0000155 Sechium edule HOM05D004597 ORTHO05D005629 1.6e-83 313.2 216 71.8
FvH4_1g09250 Fragaria vesca HOM05D004597 ORTHO05D005629 2.1e-83 312.8 216 71.8
FAN19G2435 Fragaria x ananassa HOM05D004597 ORTHO05D005629 2.1e-83 312.8 216 71.8
FAN26G0325 Fragaria x ananassa HOM05D004597 ORTHO05D005629 2.7e-83 312.4 216 71.3
FAN23G2914 Fragaria x ananassa HOM05D004597 ORTHO05D005629 8.0e-83 310.8 216 71.3
SGA_v2.0_scaffold281G46915 Striga asiatica HOM05D004597 ORTHO05D005629 8.0e-83 310.8 216 75.0
CsaV3_6G002530 Cucumis sativus L. HOM05D004597 ORTHO05D005629 1.0e-82 310.5 216 73.1
CSS0048779 Camellia sinensis var. sinensis HOM05D004597 ORTHO05D005629 2.3e-82 309.3 223 72.2
Rhsim08G0029700 Rhododendron simsii HOM05D004597 ORTHO05D005629 4.0e-82 308.5 218 70.6
Lalb_Chr13g0299261 Lupinus albus HOM05D004597 ORTHO05D005629 5.2e-82 308.1 217 73.3
Gohir.A08G246600 Gossypium hirsutum HOM05D004597 ORTHO05D005629 6.8e-82 307.8 217 71.4
PGR119G0607 Punica granatum HOM05D004597 ORTHO05D005629 6.8e-82 307.8 216 70.8
VMungo1215G0896 Vigna mungo HOM05D004597 ORTHO05D005629 6.8e-82 307.8 218 73.4
Glyma.17G046500 Glycine max HOM05D004597 ORTHO05D005629 8.8e-82 307.4 216 71.3
Phvul.003G128266 Phaseolus vulgaris HOM05D004597 ORTHO05D005629 8.8e-82 307.4 218 72.5
MD15G1222600 Malus domestica HOM05D004597 ORTHO05D005629 1.5e-81 306.6 218 71.6
Lsat_1_v5_gn_5_139160 Lactuca sativa HOM05D004597 ORTHO05D005629 2.0e-81 306.2 221 74.2
AUR62025300 Chenopodium quinoa HOM05D004597 ORTHO05D005629 2.6e-81 305.8 150 98.0
Sed0006126 Sechium edule HOM05D004597 ORTHO05D005629 3.4e-81 305.4 216 71.8
arahy.Tifrunner.gnm1.ann1.4N6INR Arachis hypogaea HOM05D004597 ORTHO05D005629 4.4e-81 305.1 216 73.6
arahy.Tifrunner.gnm1.ann1.4YLW35 Arachis hypogaea HOM05D004597 ORTHO05D005629 4.4e-81 305.1 216 73.6
DCAR_024773 Daucus carota HOM05D004597 ORTHO05D005629 4.4e-81 305.1 216 71.8
Gohir.D08G267800 Gossypium hirsutum HOM05D004597 ORTHO05D005629 9.8e-81 303.9 217 71.0
Glyma.13G113200 Glycine max HOM05D004597 ORTHO05D005629 2.2e-80 302.8 216 71.3
Peaxi162Scf00418g00113 Petunia axillaris HOM05D004597 ORTHO05D005629 1.1e-79 300.4 217 71.9
MD02G1099800 Malus domestica HOM05D004597 ORTHO05D005629 3.1e-79 298.9 218 69.7
PSO104G0043 Papaver somniferum HOM05D004597 ORTHO05D005629 4.1e-79 298.5 222 68.5
Aqoxy7G00987 Aquilegia oxysepala HOM05D004597 ORTHO05D005629 5.4e-79 298.1 223 69.5
Lj4g0020079 Lotus japonicus HOM05D004597 ORTHO05D005629 9.2e-79 297.4 180 82.2
Aa31LG4G13040 Aethionema arabicum HOM05D004597 ORTHO05D005629 1.2e-78 297.0 206 71.4
ATR0681G150 Amborella trichopoda HOM05D004597 ORTHO05D005629 2.0e-78 296.2 216 70.4
Cpa.g.sc82.76 Carica papaya HOM05D004597 ORTHO05D005629 2.0e-78 296.2 217 72.4
FAN28G1763 Fragaria x ananassa HOM05D004597 ORTHO05D005629 2.0e-78 296.2 243 64.2
CDE05G1003 Ceratophyllum demersum HOM05D004597 ORTHO05D005629 3.5e-78 295.4 212 69.8
Lalb_Chr13g0299251 Lupinus albus HOM05D004597 ORTHO05D005629 3.5e-78 295.4 219 70.8
Medtr4g124790 Medicago truncatula HOM05D004597 ORTHO05D005629 3.5e-78 295.4 218 71.6
Nitab4.5_0001092g0070 Nicotiana tabacum HOM05D004597 ORTHO05D005629 3.5e-78 295.4 218 69.3
HanXRQChr12g0354281 Helianthus annuus HOM05D004597 ORTHO05D005629 7.7e-78 294.3 222 68.5
MELO3C025034.2 Cucumis melo HOM05D004597 ORTHO05D005629 1.0e-77 293.9 253 63.2
Psat4g018640 Pisum sativum HOM05D004597 ORTHO05D005629 1.0e-77 293.9 215 69.8
CDE11G0438 Ceratophyllum demersum HOM05D004597 ORTHO05D005629 1.3e-77 293.5 212 70.8
Ca_21333_v3 Cicer arietinum L. HOM05D004597 ORTHO05D005629 1.3e-77 293.5 213 71.8
Ca_30964_v3 Cicer arietinum L. HOM05D004597 ORTHO05D005629 1.3e-77 293.5 213 71.8
Hund26094 Selenicereus undatus HOM05D004597 ORTHO05D005629 1.3e-77 293.5 192 76.6
PSO421G0482 Papaver somniferum HOM05D004597 ORTHO05D005629 2.9e-77 292.4 222 68.5
Duzib150G0058 Durio zibethinus HOM05D004597 ORTHO05D005629 3.8e-77 292.0 217 69.6
arahy.Tifrunner.gnm1.ann1.SJ1504 Arachis hypogaea HOM05D004597 ORTHO05D005629 8.6e-77 290.8 218 67.9
Os06g0196300 Oryza sativa ssp. japonica HOM05D004597 ORTHO05D005629 1.1e-76 290.4 210 70.5
THA.LOC104815073 Tarenaya hassleriana HOM05D004597 ORTHO05D005629 1.5e-76 290.0 216 67.1
Nitab4.5_0000400g0030 Nicotiana tabacum HOM05D004597 ORTHO05D005629 2.5e-76 289.3 218 68.8
Thhalv10021501m.g Eutrema salsugineum HOM05D004597 ORTHO05D005629 7.3e-76 287.7 213 66.7
PSO421G0191 Papaver somniferum HOM05D004597 ORTHO05D005629 1.6e-75 286.6 218 68.8
ECA234G4331 Erigeron canadensis HOM05D004597 ORTHO05D005629 3.6e-75 285.4 177 78.0
arahy.Tifrunner.gnm1.ann1.2G0Z8B Arachis hypogaea HOM05D004597 ORTHO05D005629 4.7e-75 285.0 218 66.5
CARHR147050 Cardamine hirsuta HOM05D004597 ORTHO05D005629 2.3e-74 282.7 206 70.9
SEGI_12051 Sequoiadendron giganteum HOM05D004597 ORTHO05D005629 4.4e-73 278.5 219 61.6
Lj4A919T43 Lonicera japonica HOM05D004597 ORTHO05D005629 7.5e-73 277.7 150 84.0
Zm00001eb278510 Zea mays HOM05D004597 ORTHO05D005629 7.5e-73 277.7 203 69.5
BcaB02g10783 Brassica carinata HOM05D004597 ORTHO05D005629 9.8e-73 277.3 208 68.8
CSS0005573 Camellia sinensis var. sinensis HOM05D004597 ORTHO05D005629 9.8e-73 277.3 147 87.8
DCAR_011918 Daucus carota HOM05D004597 ORTHO05D005629 1.1e-71 273.9 224 66.5
HPP92_019114 Vanilla planifolia HOM05D004597 ORTHO05D005629 1.8e-71 273.1 150 82.0
BolC3t19018H Brassica oleracea HOM05D004597 ORTHO05D005629 4.1e-71 271.9 210 66.7
BcaC01g02171 Brassica carinata HOM05D004597 ORTHO05D005629 5.4e-71 271.6 210 67.6
C03p67930 Brassica napus HOM05D004597 ORTHO05D005629 5.4e-71 271.6 210 67.6
BraA06t25436Z Brassica rapa HOM05D004597 ORTHO05D005629 5.4e-71 271.6 206 67.0
A06p23440 Brassica napus HOM05D004597 ORTHO05D005629 7.0e-71 271.2 206 68.0
Sp5g18690 Schrenkiella parvula HOM05D004597 ORTHO05D005629 9.2e-71 270.8 206 67.5
AL5G14740 Arabidopsis lyrata HOM05D004597 ORTHO05D005629 4.6e-70 268.5 216 64.4
Carub.0005s0392 Capsella rubella HOM05D004597 ORTHO05D005629 4.6e-70 268.5 183 72.7
AT3G26060 Arabidopsis thaliana HOM05D004597 ORTHO05D005629 2.3e-69 266.2 213 64.3
Hma1.2p1_0169F.1_g074350 Hydrangea macrophylla HOM05D004597 ORTHO05D005629 6.8e-66 254.6 217 63.6
Mapoly0033s0151 Marchantia polymorpha HOM05D004597 ORTHO05D005629 1.9e-63 246.5 185 62.7
SMO146G0055 Selaginella moellendorffii HOM05D004597 ORTHO05D005629 3.5e-62 242.3 150 71.3
Pp3c2_15400 Physcomitrium patens HOM05D004597 ORTHO05D005629 1.4e-58 230.3 212 53.8
Pp3c25_1840 Physcomitrium patens HOM05D004597 ORTHO05D005629 5.2e-58 228.4 166 62.0
Actinidia30251 Actinidia chinensis HOM05D004597 ORTHO05D005629 1.9e-52 209.9 211 57.3
SMO239G0145 Selaginella moellendorffii HOM05D004597 ORTHO05D005629 9.5e-52 207.6 176 53.4
Lsat_1_v5_gn_3_58180 Lactuca sativa HOM05D004597 ORTHO05D005629 4.7e-51 205.3 131 72.5
Lsat_1_v5_gn_7_82541 Lactuca sativa HOM05D004597 ORTHO05D005629 4.0e-50 202.2 116 78.4
Dinv42426 Davidia involucrata HOM05D004597 ORTHO05D005629 1.2e-49 200.7 145 72.4
QL11p002688 Quercus lobata HOM05D004597 ORTHO05D005629 9.9e-49 197.6 146 70.5
vmacro17087 Vaccinium macrocarpon HOM05D004597 ORTHO05D005629 3.8e-48 195.7 105 85.7
Prupe.1G206600 Prunus persica HOM05D004597 ORTHO05D005629 1.3e-45 187.2 206 53.9
THA.LOC104815153 Tarenaya hassleriana HOM05D004597 ORTHO05D005629 1.5e-41 173.7 215 45.6
Gorai.004G285400 Gossypium raimondii HOM05D004597 ORTHO05D005629 4.9e-40 168.7 145 62.1
Lsat_1_v5_gn_6_72620 Lactuca sativa HOM05D004597 ORTHO05D005629 7.1e-39 164.9 135 62.2
CBR_g31073 Chara braunii HOM05D004597 ORTHO05D000002 4.3e-36 155.6 99 67.7
TPR.G12546 Trifolium pratense HOM05D004597 ORTHO05D005629 1.3e-35 154.1 150 58.7
PRCOL_00006100 Prasinoderma coloniale HOM05D004597 ORTHO05D005629 1.5e-33 147.1 147 49.0
Cre10.g422300 Chlamydomonas reinhardtii HOM05D004597 ORTHO05D005629 2.0e-33 146.7 171 42.1
QL11p002682 Quercus lobata HOM05D004597 ORTHO05D005629 1.1e-31 141.0 72 87.5
Prupe.3G139200 Prunus persica HOM05D004597 ORTHO05D005629 1.6e-30 137.1 74 86.5
vmacro17086 Vaccinium macrocarpon HOM05D004597 ORTHO05D005629 6.7e-29 131.7 118 59.3
Ca_28838_v3 Cicer arietinum L. HOM05D004597 ORTHO05D005629 4.0e-26 122.5 149 43.6
Pp3c10_380 Physcomitrium patens HOM05D004597 ORTHO05D005629 9.0e-26 121.3 91 58.2
TPR.G7463 Trifolium pratense HOM05D004597 ORTHO05D005629 1.2e-25 120.9 103 62.1
TPR.G24405 Trifolium pratense HOM05D004597 ORTHO05D005629 1.9e-20 103.6 73 71.2
Lsat_1_v5_gn_5_125061 Lactuca sativa HOM05D004597 ORTHO05D005629 7.6e-17 91.7 57 73.7
PRCOL_00007099 Prasinoderma coloniale HOM05D004597 ORTHO05D005629 1.3e-16 90.9 150 35.3
Cre06.g257601 Chlamydomonas reinhardtii HOM05D003127 ORTHO05D003709 2.2e-16 90.1 175 31.4
MELO3C030723.2 Cucumis melo HOM05D004597 ORTHO05D005629 1.1e-15 87.8 85 54.1
Hund03845 Selenicereus undatus HOM05D003127 ORTHO05D003709 1.9e-15 87.0 227 31.3
MCO10G030 Micromonas commoda HOM05D003127 ORTHO05D003709 2.5e-15 86.7 155 33.5
Sc20g0006650 Simmondsia chinensis HOM05D003127 ORTHO05D003709 3.2e-15 86.3 228 31.6
Haze_27581 Corylus avellana HOM05D003127 ORTHO05D003709 1.6e-14 84.0 136 33.1
Oeu055331.1 Olea europaea HOM05D004597 ORTHO05D005629 2.1e-14 83.6 109 48.6
EL10Ac7g16812 Beta vulgaris HOM05D003127 ORTHO05D003709 2.7e-14 83.2 235 31.9
CAN.G574.32 Capsicum annuum HOM05D003127 ORTHO05D003709 2.7e-14 83.2 227 31.3
Duzib106G1688 Durio zibethinus HOM05D003127 ORTHO05D003709 2.7e-14 83.2 174 32.2
MCO02G383 Micromonas commoda HOM05D004597 ORTHO05D005629 2.7e-14 83.2 126 37.3
PRCOL_00002734 Prasinoderma coloniale HOM05D003127 ORTHO05D003709 2.7e-14 83.2 155 33.5
Cc06_g06390 Coffea canephora HOM05D003127 ORTHO05D003709 6.7e-13 78.6 224 31.2
unitig_22.g6577 Utricularia gibba HOM05D004597 ORTHO05D005629 1.5e-12 77.4 110 44.5
Hund19871 Selenicereus undatus HOM05D003127 ORTHO05D003709 1.9e-12 77.0 224 30.8
CBR_g34275 Chara braunii HOM05D003127 ORTHO05D003709 1.6e-11 73.9 177 29.9
AagrBONN_evm.TU.Sc2ySwM_344.1889 Anthoceros agrestis HOM05D004597 ORTHO05D005629 2.1e-11 73.6 112 38.4
Prupe.7G193400 Prunus persica HOM05D004597 ORTHO05D005629 2.8e-11 73.2 73 56.2
Cfa022044 Carpinus fangiana HOM05D004597 ORTHO05D005629 4.8e-11 72.4 72 43.1
Cre02.g114600 Chlamydomonas reinhardtii HOM05D003127 ORTHO05D003709 4.8e-11 72.4 156 28.2
Cre17.g743897 Chlamydomonas reinhardtii HOM05D003127 ORTHO05D003709 2.0e-09 67.0 160 26.9
Haze_27547 Corylus avellana HOM05D003127 ORTHO05D003709 4.5e-09 65.9 140 26.4
COL.COLO4_22132 Corchorus olitorius HOM05D004597 ORTHO05D005629 6.5e-08 62.0 39 74.4
THA.LOC104810985 Tarenaya hassleriana HOM05D004597 ORTHO05D406773 6.5e-08 62.0 203 27.6
AUR62029991 Chenopodium quinoa HOM05D005985 ORTHO05D007403 3.2e-07 59.7 160 23.1
AUR62002570 Chenopodium quinoa HOM05D005985 ORTHO05D007403 4.2e-07 59.3 160 22.5
Aqoxy2G02563 Aquilegia oxysepala HOM05D005985 ORTHO05D007403 7.2e-07 58.5 185 25.9
COL.COLO4_36227 Corchorus olitorius HOM05D004597 ORTHO05D005629 9.3e-07 58.2 31 83.9
Lsat_1_v5_gn_5_40881 Lactuca sativa HOM05D004597 ORTHO05D005629 9.3e-07 58.2 36 75.0
Lj6A699T60 Lonicera japonica HOM05D005985 ORTHO05D007403 6.1e-06 55.5 158 21.5
SalBow8G2871 Salvia bowleyana HOM05D005985 ORTHO05D007403 7.9e-06 55.1 130 24.6
Zm00001eb328770 Zea mays HOM05D005985 ORTHO05D007403 7.9e-06 55.1 138 26.1


User provided reference genes

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