Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 4.5e-55 217.6 105 100.0
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 5.0e-54 214.2 105 98.1
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 7.9e-52 206.8 104 92.3
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 2.2e-41 172.2 106 78.3
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 1.3e-38 162.9 106 72.6
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 5.0e-38 161.0 106 71.7
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 5.5e-37 157.5 106 70.8
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 1.6e-36 156.0 108 69.4
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 4.7e-36 154.5 102 73.5
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 7.9e-36 153.7 103 69.9
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 1.4e-35 152.9 116 65.5
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 3.0e-35 151.8 105 73.3
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 6.7e-35 150.6 107 70.1
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 6.7e-35 150.6 105 70.5
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 4.4e-34 147.9 101 72.3
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 7.4e-34 147.1 117 63.2
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 9.7e-34 146.7 103 68.0
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 1.3e-33 146.4 80 82.5
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 1.3e-33 146.4 111 68.5
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 1.7e-33 146.0 104 70.2
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 1.7e-33 146.0 103 68.0
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 1.7e-33 146.0 106 68.9
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.7e-33 146.0 103 69.9
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 2.2e-33 145.6 103 70.9
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 2.8e-33 145.2 104 69.2
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 2.8e-33 145.2 106 68.9
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 2.8e-33 145.2 104 69.2
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 3.7e-33 144.8 103 68.9
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 3.7e-33 144.8 99 69.7
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 4.8e-33 144.4 106 68.9
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 4.8e-33 144.4 102 71.6
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 4.8e-33 144.4 104 69.2
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 6.3e-33 144.1 104 68.3
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 6.3e-33 144.1 104 69.2
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 8.2e-33 143.7 99 68.7
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 8.2e-33 143.7 99 68.7
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 8.2e-33 143.7 102 68.6
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 8.2e-33 143.7 108 68.5
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 8.2e-33 143.7 104 66.3
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 8.2e-33 143.7 104 66.3
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 8.2e-33 143.7 99 68.7
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.1e-32 143.3 103 68.0
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 1.4e-32 142.9 110 64.5
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 1.4e-32 142.9 104 67.3
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.4e-32 142.9 99 68.7
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 1.4e-32 142.9 105 67.6
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 1.4e-32 142.9 104 70.2
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 1.8e-32 142.5 110 63.6
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 1.8e-32 142.5 110 63.6
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 1.8e-32 142.5 106 67.0
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 2.4e-32 142.1 111 63.1
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 2.4e-32 142.1 104 69.2
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 3.1e-32 141.7 102 68.6
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 3.1e-32 141.7 106 67.0
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 4.1e-32 141.4 110 63.6
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 4.1e-32 141.4 114 61.4
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 5.3e-32 141.0 99 66.7
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 5.3e-32 141.0 106 65.1
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 7.0e-32 140.6 110 62.7
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 7.0e-32 140.6 104 68.3
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 1.6e-31 139.4 103 68.0
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 1.6e-31 139.4 105 64.8
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 2.0e-31 139.0 110 61.8
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 2.0e-31 139.0 106 65.1
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 2.6e-31 138.7 104 67.3
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 2.6e-31 138.7 94 70.2
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 2.6e-31 138.7 103 68.0
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.5e-31 138.3 104 66.3
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 4.5e-31 137.9 99 65.7
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 4.5e-31 137.9 103 67.0
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 7.7e-31 137.1 111 62.2
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 7.7e-31 137.1 105 66.7
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 1.0e-30 136.7 112 61.6
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 1.0e-30 136.7 105 65.7
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 1.3e-30 136.3 103 65.0
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 1.3e-30 136.3 106 66.0
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 1.3e-30 136.3 104 63.5
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 1.7e-30 136.0 89 70.8
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 2.2e-30 135.6 112 61.6
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 2.2e-30 135.6 105 63.8
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 2.9e-30 135.2 104 65.4
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 3.8e-30 134.8 112 60.7
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 3.8e-30 134.8 112 60.7
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 3.8e-30 134.8 110 62.7
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 6.5e-30 134.0 111 62.2
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 8.5e-30 133.7 74 79.7
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 1.1e-29 133.3 112 60.7
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 1.5e-29 132.9 111 62.2
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 1.5e-29 132.9 112 61.6
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.9e-29 132.5 107 65.4
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 3.2e-29 131.7 111 61.3
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 5.5e-29 131.0 102 64.7
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 9.4e-29 130.2 101 63.4
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 2.7e-28 128.6 103 62.1
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 3.6e-28 128.3 66 83.3
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 3.6e-28 128.3 66 86.4
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 6.1e-28 127.5 113 59.3
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 8.0e-28 127.1 101 65.3
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 1.5e-26 122.9 99 59.6
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 5.7e-26 120.9 80 72.5
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 5.7e-26 120.9 99 59.6
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 1.7e-25 119.4 74 68.9
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 2.2e-25 119.0 65 83.1
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 3.7e-25 118.2 71 76.1
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 2.4e-24 115.5 159 44.0
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.2e-23 113.2 63 79.4
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 2.0e-23 112.5 65 76.9
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 4.5e-23 111.3 103 60.2
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 1.7e-22 109.4 67 82.1
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 5.0e-22 107.8 90 58.9
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 1.1e-21 106.7 61 80.3
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 4.2e-21 104.8 62 79.0
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 8.0e-20 100.5 75 66.7
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 2.0e-15 85.9 76 57.9
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 2.7e-15 85.5 70 68.6
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 6.5e-14 80.9 63 63.5
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 2.5e-13 79.0 74 58.1
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 6.8e-11 70.9 71 56.3
MCO07G580 Micromonas commoda HOM05D006678 ORTHO05D008388 5.9e-07 57.8 82 39.0
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 1.7e-06 56.2 37 64.9


User provided reference genes

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