Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 4.6e-54 214.5 127 100.0
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 2.8e-51 205.3 127 89.0
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 1.3e-35 153.3 129 73.6
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 2.4e-31 139.0 127 66.9
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 5.1e-29 131.3 97 71.1
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.6e-27 126.3 98 72.4
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 1.8e-26 122.9 127 60.6
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 5.3e-26 121.3 128 56.2
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 1.2e-25 120.2 128 57.8
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 1.5e-25 119.8 131 53.4
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 3.4e-25 118.6 128 57.8
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 5.8e-25 117.9 132 64.4
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 1.0e-24 117.1 132 59.8
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 1.7e-24 116.3 128 55.5
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 1.7e-24 116.3 132 60.6
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 2.2e-24 115.9 133 56.4
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 3.8e-24 115.2 128 55.5
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 3.8e-24 115.2 120 55.0
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 6.5e-24 114.4 130 56.9
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 6.5e-24 114.4 130 56.9
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 6.5e-24 114.4 128 53.1
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 6.5e-24 114.4 131 54.2
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 8.4e-24 114.0 127 53.5
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 8.4e-24 114.0 127 53.5
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.1e-23 113.6 103 65.0
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 2.5e-23 112.5 101 61.4
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 2.5e-23 112.5 130 54.6
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 2.5e-23 112.5 100 69.0
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 2.5e-23 112.5 127 54.3
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 5.5e-23 111.3 98 61.2
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 5.5e-23 111.3 130 55.4
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 5.5e-23 111.3 130 60.0
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 7.1e-23 110.9 86 68.6
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 7.1e-23 110.9 131 50.4
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 9.3e-23 110.5 136 52.2
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 1.2e-22 110.2 136 51.5
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 1.2e-22 110.2 128 54.7
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 2.1e-22 109.4 134 50.7
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 2.1e-22 109.4 135 51.9
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 2.1e-22 109.4 130 53.1
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 2.7e-22 109.0 103 63.1
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 2.7e-22 109.0 130 58.5
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 3.5e-22 108.6 128 55.5
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 6.0e-22 107.8 133 57.9
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 6.0e-22 107.8 98 60.2
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 6.0e-22 107.8 120 51.7
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 6.0e-22 107.8 130 58.5
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.0e-21 107.1 132 50.8
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 1.3e-21 106.7 129 52.7
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.3e-21 106.7 103 56.3
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 1.8e-21 106.3 127 53.5
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 2.3e-21 105.9 128 49.2
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 2.3e-21 105.9 128 49.2
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 2.3e-21 105.9 82 67.1
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 3.0e-21 105.5 128 49.2
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 3.0e-21 105.5 101 58.4
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 3.0e-21 105.5 128 50.8
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 3.0e-21 105.5 99 61.6
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 3.0e-21 105.5 160 46.2
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 3.9e-21 105.1 97 58.8
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 3.9e-21 105.1 130 50.0
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 3.9e-21 105.1 99 59.6
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 3.9e-21 105.1 128 50.8
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 6.7e-21 104.4 129 52.7
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 8.7e-21 104.0 133 50.4
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 1.1e-20 103.6 98 57.1
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 1.1e-20 103.6 98 57.1
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 1.1e-20 103.6 98 57.1
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 1.1e-20 103.6 98 60.2
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 1.5e-20 103.2 106 56.6
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 1.5e-20 103.2 135 49.6
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 1.9e-20 102.8 130 49.2
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 1.9e-20 102.8 128 50.0
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 2.5e-20 102.4 127 52.8
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 9.7e-20 100.5 97 54.6
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 9.7e-20 100.5 97 54.6
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 9.7e-20 100.5 97 54.6
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 1.3e-19 100.1 152 45.4
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 1.3e-19 100.1 133 49.6
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 1.6e-19 99.8 132 47.0
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 2.8e-19 99.0 83 62.7
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 2.8e-19 99.0 83 62.7
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 2.8e-19 99.0 99 57.6
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 3.7e-19 98.6 98 57.1
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 3.7e-19 98.6 130 50.8
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 4.8e-19 98.2 97 53.6
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 4.8e-19 98.2 98 55.1
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 8.2e-19 97.4 97 53.6
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 1.1e-18 97.1 131 49.6
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 1.4e-18 96.7 131 49.6
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 2.4e-18 95.9 76 68.4
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 2.4e-18 95.9 99 53.5
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 4.1e-18 95.1 73 65.8
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 4.1e-18 95.1 98 54.1
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 9.0e-18 94.0 136 48.5
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 4.5e-17 91.7 73 65.8
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 4.5e-17 91.7 73 65.8
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.3e-16 90.1 97 53.6
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 3.8e-16 88.6 127 50.4
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 1.1e-15 87.0 81 59.3
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 5.5e-15 84.7 73 60.3
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 5.5e-15 84.7 97 51.5
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 7.2e-15 84.3 139 41.0
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 1.2e-14 83.6 70 58.6
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 5.1e-13 78.2 125 43.2
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 9.7e-12 73.9 131 41.2
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 1.4e-10 70.1 131 38.2
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 1.0e-08 63.9 76 52.6


User provided reference genes

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