Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028121 Chenopodium quinoa HOM05D006040 ORTHO05D007134 1.6e-246 855.5 408 100.0
AUR62005943 Chenopodium quinoa HOM05D006040 ORTHO05D007134 5.0e-227 790.8 408 91.9
EL10Ac3g05126 Beta vulgaris HOM05D006040 ORTHO05D007134 9.2e-189 663.7 410 77.8
Hund21080 Selenicereus undatus HOM05D006040 ORTHO05D007134 1.7e-171 606.3 408 71.1
Actinidia18692 Actinidia chinensis HOM05D006040 ORTHO05D007134 1.5e-135 486.9 439 55.8
Dinv29187 Davidia involucrata HOM05D006040 ORTHO05D007134 3.4e-135 485.7 457 55.6
Rhsim09G0211300 Rhododendron simsii HOM05D006040 ORTHO05D007134 4.9e-134 481.9 440 56.8
Hma1.2p1_1235F.1_g269220 Hydrangea macrophylla HOM05D006040 ORTHO05D007134 8.2e-129 464.5 449 54.1
Sc25g0001060 Simmondsia chinensis HOM05D006040 ORTHO05D007134 3.8e-126 455.7 342 64.3
GSVIVG01038686001 Vitis vinifera HOM05D006040 ORTHO05D007134 9.4e-125 451.1 409 55.0
PSO063G2217 Papaver somniferum HOM05D006040 ORTHO05D007134 3.6e-124 449.1 470 48.7
TAR375G0263 Trochodendron aralioides HOM05D006040 ORTHO05D007134 3.6e-124 449.1 462 50.9
Cc02_g00560 Coffea canephora HOM05D006040 ORTHO05D007134 2.3e-123 446.4 434 51.6
PGR042G3864 Punica granatum HOM05D006040 ORTHO05D007134 3.0e-123 446.0 452 50.9
Prupe.2G322500 Prunus persica HOM05D006040 ORTHO05D007134 3.9e-123 445.7 459 49.5
arahy.Tifrunner.gnm1.ann1.53C9AK Arachis hypogaea HOM05D006040 ORTHO05D007134 1.1e-122 444.1 437 51.5
arahy.Tifrunner.gnm1.ann1.QSB9JP Arachis hypogaea HOM05D006040 ORTHO05D007134 7.4e-122 441.4 437 51.0
Aqoxy3G00220 Aquilegia oxysepala HOM05D006040 ORTHO05D007134 3.7e-121 439.1 454 48.2
Os02g0106700 Oryza sativa ssp. japonica HOM05D006040 ORTHO05D007134 3.1e-120 436.0 417 50.4
Cfa018660 Carpinus fangiana HOM05D006040 ORTHO05D007134 3.4e-119 432.6 466 49.1
Sed0006638 Sechium edule HOM05D006040 ORTHO05D007134 1.3e-118 430.6 453 49.2
Zm00001eb209800 Zea mays HOM05D006040 ORTHO05D007134 1.3e-118 430.6 414 51.0
PSO017G1458 Papaver somniferum HOM05D006040 ORTHO05D007134 1.7e-118 430.3 470 47.9
SalBow2G1501 Salvia bowleyana HOM05D006040 ORTHO05D007134 2.9e-118 429.5 413 50.6
MSTRG.18 Avicennia marina HOM05D006040 ORTHO05D007134 3.8e-118 429.1 417 52.0
MD07G1303900 Malus domestica HOM05D006040 ORTHO05D007134 8.5e-118 427.9 461 47.1
PGSC0003DMG400026928 Solanum tuberosum HOM05D006040 ORTHO05D007134 8.5e-118 427.9 429 52.4
CsaV3_2G035690 Cucumis sativus L. HOM05D006040 ORTHO05D007134 1.9e-117 426.8 456 48.5
QL01p000066 Quercus lobata HOM05D006040 ORTHO05D007134 1.9e-117 426.8 478 48.1
TWI13G0007 Tripterygium wilfordii HOM05D006040 ORTHO05D007134 2.5e-117 426.4 453 48.6
TWI74G0239 Tripterygium wilfordii HOM05D006040 ORTHO05D007134 2.5e-117 426.4 453 48.6
Zm00001eb229510 Zea mays HOM05D006040 ORTHO05D007134 3.2e-117 426.0 414 50.5
Eucgr.A00979 Eucalyptus grandis HOM05D006040 ORTHO05D007134 4.2e-117 425.6 449 48.8
FvH4_7g32290 Fragaria vesca HOM05D006040 ORTHO05D007134 4.2e-117 425.6 454 47.6
FAN20G2114 Fragaria x ananassa HOM05D006040 ORTHO05D007134 7.2e-117 424.9 454 47.6
RcHm_v2.0_Chr1g0383341 Rosa chinensis HOM05D006040 ORTHO05D007134 1.2e-116 424.1 453 47.2
Nitab4.5_0000115g0200 Nicotiana tabacum HOM05D006040 ORTHO05D007134 4.7e-116 422.2 419 49.6
ClCG02G007980 Citrullus lanatus HOM05D006040 ORTHO05D007134 6.1e-116 421.8 452 48.5
Lj3C891T14 Lonicera japonica HOM05D006040 ORTHO05D007134 7.9e-116 421.4 365 57.3
CANSAT21G0186 Cannabis sativa HOM05D006040 ORTHO05D007134 1.4e-115 420.6 440 49.8
Lj1g0004094 Lotus japonicus HOM05D006040 ORTHO05D007134 3.0e-115 419.5 419 51.3
FAN10G3876 Fragaria x ananassa HOM05D006040 ORTHO05D007134 3.9e-115 419.1 458 46.3
FAN10G2970 Fragaria x ananassa HOM05D006040 ORTHO05D007134 1.1e-114 417.5 458 45.9
FAN06G3790 Fragaria x ananassa HOM05D006040 ORTHO05D007134 2.6e-114 416.4 453 47.2
Lalb_Chr08g0239381 Lupinus albus HOM05D006040 ORTHO05D007134 9.7e-114 414.5 409 52.3
Sopen06g029320 Solanum pennellii HOM05D006040 ORTHO05D007134 9.7e-114 414.5 432 50.7
TPR.G35913 Trifolium pratense HOM05D006040 ORTHO05D007134 9.7e-114 414.5 411 53.0
FAN03G3503 Fragaria x ananassa HOM05D006040 ORTHO05D007134 2.2e-113 413.3 458 45.2
Potri.012G004300 Populus trichocarpa HOM05D006040 ORTHO05D007134 3.7e-113 412.5 457 46.8
Lalb_Chr10g0102951 Lupinus albus HOM05D006040 ORTHO05D007134 8.2e-113 411.4 468 46.4
LjContig00155g0021870 Lotus japonicus HOM05D006040 ORTHO05D007134 5.3e-112 408.7 454 47.4
Solyc06g072970.3 Solanum lycopersicum HOM05D006040 ORTHO05D007134 7.0e-112 408.3 425 50.6
SGA_v2.0_scaffold59G20786 Striga asiatica HOM05D006040 ORTHO05D007134 7.0e-112 408.3 409 51.1
Gorai.004G126800 Gossypium raimondii HOM05D006040 ORTHO05D007134 3.5e-111 406.0 439 49.4
Nitab4.5_0003012g0150 Nicotiana tabacum HOM05D006040 ORTHO05D007134 2.2e-110 403.3 462 46.1
Medtr3g093420 Medicago truncatula HOM05D006040 ORTHO05D007134 2.9e-110 402.9 408 50.7
Glyma.02G220600 Glycine max HOM05D006040 ORTHO05D007134 6.5e-110 401.7 457 47.5
DCAR_010554 Daucus carota HOM05D006040 ORTHO05D007134 4.2e-109 399.1 426 49.5
MELO3C024776.2 Cucumis melo HOM05D006040 ORTHO05D007134 5.5e-109 398.7 412 49.5
Thecc.03G212500 Theobroma cacao HOM05D006040 ORTHO05D007134 9.4e-109 397.9 434 49.3
Psat2g061600 Pisum sativum HOM05D006040 ORTHO05D007134 1.2e-108 397.5 450 46.4
Migut.F00965 Erythranthe guttata HOM05D006040 ORTHO05D007134 2.7e-108 396.4 414 48.6
TPR.G27916 Trifolium pratense HOM05D006040 ORTHO05D007134 2.7e-108 396.4 451 47.5
Ca_05537_v3 Cicer arietinum L. HOM05D006040 ORTHO05D007134 6.1e-108 395.2 451 47.0
Sabra12G0000200 Salix brachista HOM05D006040 ORTHO05D007134 1.4e-107 394.0 427 47.5
Phvul.009G040600 Phaseolus vulgaris HOM05D006040 ORTHO05D007134 1.8e-107 393.7 418 49.5
Manes.05G196800 Manihot esculenta HOM05D006040 ORTHO05D007134 3.0e-107 392.9 456 44.1
Medtr5g068730 Medicago truncatula HOM05D006040 ORTHO05D007134 5.2e-107 392.1 451 45.2
Atru.chr12.2497 Acer truncatum HOM05D006040 ORTHO05D007134 8.8e-107 391.3 438 47.0
Atru.chr12.2521 Acer truncatum HOM05D006040 ORTHO05D007134 8.8e-107 391.3 438 47.0
Ca_16841_v3 Cicer arietinum L. HOM05D006040 ORTHO05D007134 2.6e-106 389.8 320 60.0
Glyma.06G139400 Glycine max HOM05D006040 ORTHO05D007134 2.6e-106 389.8 418 48.6
SEGI_40721 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 5.7e-106 388.7 483 43.9
HPP92_012812 Vanilla planifolia HOM05D006040 ORTHO05D007134 2.8e-105 386.3 433 45.0
ATR0579G018 Amborella trichopoda HOM05D006040 ORTHO05D007134 4.8e-105 385.6 417 47.7
Psat5g070440 Pisum sativum HOM05D006040 ORTHO05D007134 6.3e-105 385.2 320 58.4
CSS0020482 Camellia sinensis var. sinensis HOM05D006040 ORTHO05D007134 2.6e-103 379.8 382 53.1
Peaxi162Scf00815g00228 Petunia axillaris HOM05D006040 ORTHO05D007134 1.3e-102 377.5 350 54.0
VMungo0647G0797 Vigna mungo HOM05D006040 ORTHO05D007134 2.9e-102 376.3 372 50.3
THA.LOC104798996 Tarenaya hassleriana HOM05D006040 ORTHO05D007134 3.8e-102 375.9 426 46.7
HanXRQChr14g0463001 Helianthus annuus HOM05D006040 ORTHO05D007134 6.1e-100 368.6 413 47.5
Cpa.g.sc3.191 Carica papaya HOM05D006040 ORTHO05D007134 8.0e-100 368.2 364 52.5
Lsat_1_v5_gn_8_36881 Lactuca sativa HOM05D006040 ORTHO05D007134 4.0e-99 365.9 426 44.8
ECA238G4129 Erigeron canadensis HOM05D006040 ORTHO05D007134 8.8e-99 364.8 419 47.0
Sp2g22720 Schrenkiella parvula HOM05D006040 ORTHO05D007134 2.6e-98 363.2 423 48.0
CAN.G65.140 Capsicum annuum HOM05D006040 ORTHO05D007134 9.7e-98 361.3 357 51.8
BraA06t26478Z Brassica rapa HOM05D006040 ORTHO05D007134 7.0e-96 355.1 427 46.6
Thhalv10004343m.g Eutrema salsugineum HOM05D006040 ORTHO05D007134 2.0e-95 353.6 424 45.5
Carub.0006s2254 Capsella rubella HOM05D006040 ORTHO05D007134 2.7e-95 353.2 424 46.0
C07p43010 Brassica napus HOM05D006040 ORTHO05D007134 7.7e-95 351.7 427 46.6
A06p35530 Brassica napus HOM05D006040 ORTHO05D007134 1.0e-94 351.3 425 46.6
AT5G24680 Arabidopsis thaliana HOM05D006040 ORTHO05D007134 1.1e-93 347.8 424 44.3
unitig_578.g16670 Utricularia gibba HOM05D006040 ORTHO05D007134 3.2e-93 346.3 330 51.2
BolC7t44830H Brassica oleracea HOM05D006040 ORTHO05D007134 1.6e-92 344.0 427 46.8
AL6G36290 Arabidopsis lyrata HOM05D006040 ORTHO05D007134 2.2e-89 333.6 424 44.6
Gohir.A08G107000 Gossypium hirsutum HOM05D006040 ORTHO05D007134 3.8e-86 322.8 439 43.3
Aa31LG11G3920 Aethionema arabicum HOM05D006040 ORTHO05D007134 6.8e-83 312.0 514 36.8
Phvul.008G187700 Phaseolus vulgaris HOM05D006040 ORTHO05D007134 7.5e-82 308.5 394 43.4
BcaNung01250 Brassica carinata HOM05D006040 ORTHO05D007134 9.8e-82 308.1 429 42.7
vmacro10175 Vaccinium macrocarpon HOM05D006040 ORTHO05D007134 1.8e-80 303.9 409 44.3
FvH4_7g33360 Fragaria vesca HOM05D006040 ORTHO05D007134 2.7e-79 300.1 298 49.7
Glyma.14G187200 Glycine max HOM05D006040 ORTHO05D007134 3.3e-77 293.1 331 46.8
Pp3c12_6120 Physcomitrium patens HOM05D006040 ORTHO05D007134 1.0e-75 288.1 546 34.1
COL.COLO4_14403 Corchorus olitorius HOM05D002417 ORTHO05D002589 3.2e-72 276.6 326 45.1
Pp3c13_14780 Physcomitrium patens HOM05D006040 ORTHO05D007134 2.7e-71 273.5 439 36.2
FAN01G0445 Fragaria x ananassa HOM05D006040 ORTHO05D007134 1.0e-70 271.6 405 37.5
Haze_00002 Corylus avellana HOM05D006040 ORTHO05D007134 8.6e-70 268.5 285 51.2
Pp3c25_2290 Physcomitrium patens HOM05D006040 ORTHO05D007134 2.0e-66 257.3 428 33.4
Pp3c20_10180 Physcomitrium patens HOM05D006040 ORTHO05D007134 3.4e-66 256.5 402 34.8
Glyma.04G225400 Glycine max HOM05D006040 ORTHO05D007134 3.2e-64 250.0 324 42.9
Duzib068G0842 Durio zibethinus HOM05D006040 ORTHO05D007134 2.3e-62 243.8 254 52.0
MBI12_g33183_MAGBIO Magnolia biondii HOM05D006040 ORTHO05D007134 5.6e-61 239.2 317 42.3
Mapoly0044s0025 Marchantia polymorpha HOM05D006040 ORTHO05D007134 1.8e-59 234.2 502 31.3
VMungo1309G2872 Vigna mungo HOM05D006040 ORTHO05D007134 1.9e-56 224.2 309 41.4
Gohir.D08G118000 Gossypium hirsutum HOM05D006040 ORTHO05D007134 4.1e-56 223.0 364 39.3
Mapoly0088s0074 Marchantia polymorpha HOM05D006040 ORTHO05D007134 5.4e-56 222.6 565 27.6
CARHR188790 Cardamine hirsuta HOM05D006040 ORTHO05D007134 8.9e-51 205.3 246 44.7
MD01G1231800 Malus domestica HOM05D006040 ORTHO05D007134 1.0e-46 191.8 141 61.0
CBR_g3746 Chara braunii HOM05D000019 ORTHO05D000002 3.6e-44 183.3 159 54.7
CBR_g29958 Chara braunii HOM05D006040 ORTHO05D007134 1.2e-42 178.3 473 26.6
Pp3c23_1100 Physcomitrium patens HOM05D006040 ORTHO05D007134 7.1e-40 169.1 142 52.1
SEGI_00936 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 1.9e-37 161.0 191 44.0
SEGI_39404 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 1.6e-36 157.9 219 38.8
Lalb_Chr14g0364691 Lupinus albus HOM05D006040 ORTHO05D007134 4.0e-35 153.3 174 47.1
SMO347G0626 Selaginella moellendorffii HOM05D006040 ORTHO05D007134 1.4e-32 144.8 173 44.5
Oeu063747.1 Olea europaea HOM05D006040 ORTHO05D007134 4.2e-24 116.7 94 59.6
MD01G1231900 Malus domestica HOM05D006040 ORTHO05D007134 1.2e-23 115.2 89 58.4
Haze_17391 Corylus avellana HOM05D001765 ORTHO05D005876 2.1e-23 114.4 153 46.4
FvH4_7g33700 Fragaria vesca HOM05D006040 ORTHO05D007134 2.7e-23 114.0 265 29.4
SEGI_38707 Sequoiadendron giganteum HOM05D006040 ORTHO05D007134 1.0e-22 112.1 212 32.5
CDE04G3558 Ceratophyllum demersum HOM05D006040 ORTHO05D007134 1.4e-11 75.1 58 58.6
Cre05.g240500 Chlamydomonas reinhardtii HOM05D006040 ORTHO05D007134 1.4e-11 75.1 62 58.1
SalBow2G3456 Salvia bowleyana HOM05D000168 ORTHO05D007134 5.0e-09 66.6 41 68.3
Oeu063748.2 Olea europaea HOM05D003307 ORTHO05D003798 3.6e-07 60.5 52 50.0
FvH4_7g33361 Fragaria vesca HOM05D006040 ORTHO05D007134 8.8e-06 55.8 51 45.1


User provided reference genes

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