Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028088 Chenopodium quinoa HOM05D001799 ORTHO05D001655 4.8e-146 521.2 266 100.0
AUR62005982 Chenopodium quinoa HOM05D001799 ORTHO05D001655 1.2e-77 293.9 339 54.0
Ah.13g070830 Amaranthus hybridus HOM05D001799 ORTHO05D001655 6.2e-61 238.4 329 44.1
EL10Ac3g05163 Beta vulgaris HOM05D001799 ORTHO05D001655 5.3e-36 155.6 379 34.8
AUR62005981 Chenopodium quinoa HOM05D001799 ORTHO05D001655 5.9e-35 152.1 340 36.5
AUR62028089 Chenopodium quinoa HOM05D001799 ORTHO05D001655 1.4e-33 147.5 318 39.3
Hund21067 Selenicereus undatus HOM05D001799 ORTHO05D001655 3.8e-26 122.9 330 32.4
Ah.13g070840 Amaranthus hybridus HOM05D001799 ORTHO05D001655 1.4e-23 114.4 99 59.6
AUR62005983 Chenopodium quinoa HOM05D001799 ORTHO05D001655 5.5e-17 92.4 87 50.6
AUR62028087 Chenopodium quinoa HOM05D001799 ORTHO05D001655 6.1e-16 89.0 87 48.3
EL10Ac3g05164 Beta vulgaris HOM05D001799 ORTHO05D001655 1.0e-15 88.2 126 40.5
EL10Ac3g05162 Beta vulgaris HOM05D001799 ORTHO05D001655 5.2e-15 85.9 249 30.5
arahy.Tifrunner.gnm1.ann1.L3LS3U Arachis hypogaea HOM05D001799 ORTHO05D001655 6.7e-15 85.5 124 39.5
Thhalv10015504m.g Eutrema salsugineum HOM05D001799 ORTHO05D001655 2.6e-14 83.6 107 40.2
Hund21068 Selenicereus undatus HOM05D001799 ORTHO05D001655 7.4e-14 82.0 145 35.2
AUR62005980 Chenopodium quinoa HOM05D001799 ORTHO05D001655 9.7e-14 81.6 120 37.5
Peaxi162Scf00912g00142 Petunia axillaris HOM05D001799 ORTHO05D001655 2.8e-13 80.1 147 36.1
Ca_16784_v3 Cicer arietinum L. HOM05D001799 ORTHO05D001655 3.1e-12 76.6 155 34.2
Ca_16800_v3 Cicer arietinum L. HOM05D001799 ORTHO05D001655 3.1e-12 76.6 155 34.2
Nitab4.5_0006821g0050 Nicotiana tabacum HOM05D001799 ORTHO05D001655 4.1e-12 76.3 138 37.0
Lalb_Chr08g0239541 Lupinus albus HOM05D001799 ORTHO05D001655 9.1e-12 75.1 147 34.7
AL8G29300 Arabidopsis lyrata HOM05D001799 ORTHO05D001655 1.2e-11 74.7 84 40.5
MD07G1300600 Malus domestica HOM05D001799 ORTHO05D001655 1.6e-11 74.3 146 34.2
Nitab4.5_0000021g0110 Nicotiana tabacum HOM05D001799 ORTHO05D001655 1.6e-11 74.3 162 35.2
Sopen03g021900 Solanum pennellii HOM05D001799 ORTHO05D001655 3.5e-11 73.2 139 33.8
PGSC0003DMG400000581 Solanum tuberosum HOM05D001799 ORTHO05D001655 5.9e-11 72.4 139 33.8
Carub.0007s1316 Capsella rubella HOM05D001799 ORTHO05D001655 7.7e-11 72.0 150 32.0
Lj3A893T82 Lonicera japonica HOM05D001799 ORTHO05D001655 1.0e-10 71.6 142 31.7
Lalb_Chr11g0067451 Lupinus albus HOM05D001799 ORTHO05D001655 1.0e-10 71.6 143 32.2
QL09p006902 Quercus lobata HOM05D001799 ORTHO05D001655 1.3e-10 71.2 168 31.5
Hund21066 Selenicereus undatus HOM05D001799 ORTHO05D001655 1.3e-10 71.2 157 33.8
MD01G1229200 Malus domestica HOM05D001799 ORTHO05D001655 1.7e-10 70.9 145 33.1
Solyc03g080170.3 Solanum lycopersicum HOM05D001799 ORTHO05D001655 1.7e-10 70.9 139 33.1
arahy.Tifrunner.gnm1.ann1.HAI2J2 Arachis hypogaea HOM05D001799 ORTHO05D001655 2.2e-10 70.5 154 31.8
arahy.Tifrunner.gnm1.ann1.43FH2R Arachis hypogaea HOM05D001799 ORTHO05D001655 5.0e-10 69.3 123 33.3
CAN.G303.35 Capsicum annuum HOM05D001799 ORTHO05D001655 5.0e-10 69.3 163 30.1
Glyma.04G227600 Glycine max HOM05D001799 ORTHO05D001655 6.5e-10 68.9 151 31.1
A01p19050 Brassica napus HOM05D001799 ORTHO05D001655 8.5e-10 68.6 142 31.0
BraA01t01848Z Brassica rapa HOM05D001799 ORTHO05D001655 8.5e-10 68.6 142 31.0
Oeu061036.1 Olea europaea HOM05D001799 ORTHO05D001655 8.5e-10 68.6 157 31.8
Ah.07g204490 Amaranthus hybridus HOM05D001799 ORTHO05D001655 1.1e-09 68.2 138 34.8
BcaC09g50556 Brassica carinata HOM05D001799 ORTHO05D001655 1.1e-09 68.2 142 31.0
C01p23980 Brassica napus HOM05D001799 ORTHO05D001655 1.5e-09 67.8 142 31.0
MD07G1300800 Malus domestica HOM05D001799 ORTHO05D001655 1.5e-09 67.8 195 28.7
BolC1t02348H Brassica oleracea HOM05D001799 ORTHO05D001655 2.5e-09 67.0 142 30.3
Thhalv10026379m.g Eutrema salsugineum HOM05D001799 ORTHO05D001655 2.5e-09 67.0 136 33.8
Sp7g25630 Schrenkiella parvula HOM05D001799 ORTHO05D001655 3.2e-09 66.6 136 33.8
RcHm_v2.0_Chr1g0382971 Rosa chinensis HOM05D001799 ORTHO05D001655 4.2e-09 66.2 137 30.7
MSTRG.26970 Avicennia marina HOM05D001799 ORTHO05D001655 5.5e-09 65.9 144 29.2
CARHR267350 Cardamine hirsuta HOM05D001799 ORTHO05D001655 5.5e-09 65.9 140 30.7
BcaNung01644 Brassica carinata HOM05D001799 ORTHO05D001655 7.2e-09 65.5 153 32.0
AUR62028090 Chenopodium quinoa HOM05D001799 ORTHO05D001655 9.4e-09 65.1 142 30.3
Dinv29206 Davidia involucrata HOM05D001799 ORTHO05D001655 9.4e-09 65.1 151 33.1
AL7G25010 Arabidopsis lyrata HOM05D001799 ORTHO05D001655 1.2e-08 64.7 150 29.3
Ciclev10022593m.g Citrus clementina HOM05D001799 ORTHO05D001655 1.2e-08 64.7 154 29.9
DCAR_010570 Daucus carota HOM05D001799 ORTHO05D001655 1.2e-08 64.7 149 32.2
Carub.0008s1445 Capsella rubella HOM05D001799 ORTHO05D001655 1.6e-08 64.3 129 31.8
MD07G1211900 Malus domestica HOM05D001799 ORTHO05D001655 2.1e-08 63.9 130 35.4
vmacro06449 Vaccinium macrocarpon HOM05D001799 ORTHO05D001655 2.1e-08 63.9 127 32.3
AT5G54148 Arabidopsis thaliana HOM05D001799 ORTHO05D001655 2.7e-08 63.5 116 32.8
DCAR_014565 Daucus carota HOM05D001799 ORTHO05D001655 2.7e-08 63.5 112 30.4
Psat5g071400 Pisum sativum HOM05D001799 ORTHO05D001655 2.7e-08 63.5 156 28.8
TAR374G0661 Trochodendron aralioides HOM05D001799 ORTHO05D001655 2.7e-08 63.5 148 32.4
Manes.01G043800 Manihot esculenta HOM05D001799 ORTHO05D001655 3.6e-08 63.2 122 32.8
TAR375G0758 Trochodendron aralioides HOM05D001799 ORTHO05D001655 4.7e-08 62.8 147 32.0
AUR62028091 Chenopodium quinoa HOM05D001799 ORTHO05D001655 6.1e-08 62.4 115 30.4
Ca_16785_v3 Cicer arietinum L. HOM05D001799 ORTHO05D001655 6.1e-08 62.4 148 30.4
Ca_16801_v3 Cicer arietinum L. HOM05D001799 ORTHO05D001655 6.1e-08 62.4 148 30.4
Haze_00305 Corylus avellana HOM05D000001 ORTHO05D001653 6.1e-08 62.4 144 30.6
AT4G27660 Arabidopsis thaliana HOM05D001799 ORTHO05D001655 8.0e-08 62.0 123 32.5
Cfa016150 Carpinus fangiana HOM05D001799 ORTHO05D001655 8.0e-08 62.0 150 29.3
QL09p006905 Quercus lobata HOM05D001799 ORTHO05D001655 8.0e-08 62.0 161 29.2
SGA_v2.0_scaffold18G08472 Striga asiatica HOM05D001799 ORTHO05D001655 8.0e-08 62.0 149 32.2
Atru.chr12.2449 Acer truncatum HOM05D001799 ORTHO05D001655 1.0e-07 61.6 117 30.8
Gohir.D11G016600 Gossypium hirsutum HOM05D001799 ORTHO05D001655 1.0e-07 61.6 153 30.1
Gorai.007G017400 Gossypium raimondii HOM05D001799 ORTHO05D001655 1.0e-07 61.6 153 30.1
Nn1g09661 Nelumbo nucifera HOM05D001799 ORTHO05D001655 1.4e-07 61.2 149 28.2
Nn8g39146 Nelumbo nucifera HOM05D001799 ORTHO05D001655 1.4e-07 61.2 149 28.2
A10p11470 Brassica napus HOM05D001799 ORTHO05D001655 1.8e-07 60.8 131 29.0
BraA10t43241Z Brassica rapa HOM05D001799 ORTHO05D001655 1.8e-07 60.8 131 29.0
Atru.chr12.2490 Acer truncatum HOM05D001799 ORTHO05D001655 2.3e-07 60.5 131 29.8
Cfa016149 Carpinus fangiana HOM05D000001 ORTHO05D001655 3.0e-07 60.1 114 29.8
COL.COLO4_14379 Corchorus olitorius HOM05D001799 ORTHO05D001655 3.0e-07 60.1 177 25.4
BcaB01g04279 Brassica carinata HOM05D001799 ORTHO05D001655 4.0e-07 59.7 116 29.3
Cc02_g00750 Coffea canephora HOM05D001799 ORTHO05D001655 4.0e-07 59.7 177 30.5
Duzib205G0886 Durio zibethinus HOM05D001799 ORTHO05D001655 4.0e-07 59.7 150 28.0
FvH4_7g33000 Fragaria vesca HOM05D001799 ORTHO05D001655 4.0e-07 59.7 136 29.4
SalBow4G2285 Salvia bowleyana HOM05D001799 ORTHO05D001655 4.0e-07 59.7 138 31.9
SalBow4G2945 Salvia bowleyana HOM05D001799 ORTHO05D001655 4.0e-07 59.7 138 31.9
CANSAT21G2156 Cannabis sativa HOM05D001799 ORTHO05D001655 5.2e-07 59.3 148 29.7
Glyma.04G227500 Glycine max HOM05D001799 ORTHO05D001655 5.2e-07 59.3 150 30.0
Prupe.2G319800 Prunus persica HOM05D001799 ORTHO05D001655 5.2e-07 59.3 100 39.0
AL8G29290 Arabidopsis lyrata HOM05D001799 ORTHO05D001655 6.7e-07 58.9 134 28.4
BcaC06g32668 Brassica carinata HOM05D001799 ORTHO05D001655 6.7e-07 58.9 134 29.9
TPR.G33369 Trifolium pratense HOM05D001799 ORTHO05D001655 6.7e-07 58.9 145 29.0
BcaC04g20368 Brassica carinata HOM05D001799 ORTHO05D001655 8.8e-07 58.5 129 29.5
BcaC04g20370 Brassica carinata HOM05D001799 ORTHO05D001655 8.8e-07 58.5 129 29.5
C09p44430 Brassica napus HOM05D001799 ORTHO05D001655 8.8e-07 58.5 129 29.5
BolC9t57311H Brassica oleracea HOM05D001799 ORTHO05D001655 8.8e-07 58.5 129 29.5
arahy.Tifrunner.gnm1.ann1.A9XWZ4 Arachis hypogaea HOM05D001799 ORTHO05D001655 1.2e-06 58.2 148 27.7
Migut.F00143 Erythranthe guttata HOM05D001799 ORTHO05D001655 1.2e-06 58.2 115 31.3
FAN01G2762 Fragaria x ananassa HOM05D001799 ORTHO05D001655 1.2e-06 58.2 136 29.4
THA.LOC104811886 Tarenaya hassleriana HOM05D001799 ORTHO05D001655 1.2e-06 58.2 165 27.3
vmacro06448 Vaccinium macrocarpon HOM05D001799 ORTHO05D001655 1.2e-06 58.2 145 29.0
CSS0016235 Camellia sinensis var. sinensis HOM05D001799 ORTHO05D001655 1.5e-06 57.8 142 26.8
Duzib138G0086 Durio zibethinus HOM05D001799 ORTHO05D001655 1.5e-06 57.8 79 35.4
DCAR_012111 Daucus carota HOM05D001799 ORTHO05D001655 2.0e-06 57.4 152 27.0
Thhalv10015984m.g Eutrema salsugineum HOM05D001799 ORTHO05D001655 2.0e-06 57.4 103 31.1
FAN10G2261 Fragaria x ananassa HOM05D001799 ORTHO05D001655 2.0e-06 57.4 136 28.7
FAN10G3955 Fragaria x ananassa HOM05D001799 ORTHO05D001655 2.0e-06 57.4 136 28.7
FAN03G0617 Fragaria x ananassa HOM05D001799 ORTHO05D001655 2.6e-06 57.0 136 28.7
MBI04_g22926_MAGBIO Magnolia biondii HOM05D001799 ORTHO05D001655 4.4e-06 56.2 124 33.9
AT5G54150 Arabidopsis thaliana HOM05D001799 ORTHO05D001655 9.7e-06 55.1 113 28.3
PGR004G1887 Punica granatum HOM05D001799 ORTHO05D001655 9.7e-06 55.1 133 28.6
Sc19g0000540 Simmondsia chinensis HOM05D001799 ORTHO05D001655 9.7e-06 55.1 141 28.4


User provided reference genes

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