Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028022 Chenopodium quinoa HOM05D007570 ORTHO05D009365 7.1e-230 801.6 1032 100.0
EL10Ac2g03647 Beta vulgaris HOM05D007570 ORTHO05D009365 1.4e-76 292.4 250 66.4
Ah.10g033640 Amaranthus hybridus HOM05D007570 ORTHO05D009365 6.5e-66 256.9 245 61.6
Hund19367 Selenicereus undatus HOM05D007570 ORTHO05D009365 2.0e-59 235.3 251 57.8
AUR62020702 Chenopodium quinoa HOM05D007570 ORTHO05D009365 2.4e-36 158.7 80 97.5
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 9.2e-36 156.8 256 44.9
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 9.5e-33 146.7 271 41.3
Hma1.2p1_1374F.1_g278810 Hydrangea macrophylla HOM05D007570 ORTHO05D009365 9.9e-30 136.7 258 38.0
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 9.9e-30 136.7 257 40.5
Lj5C421G19 Lonicera japonica HOM05D007570 ORTHO05D009365 1.3e-29 136.3 258 45.7
DCAR_001944 Daucus carota HOM05D007570 ORTHO05D009365 2.1e-27 129.0 249 41.4
CSS0011257 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 3.0e-26 125.2 256 41.8
Cc02_g33170 Coffea canephora HOM05D007570 ORTHO05D009365 3.9e-26 124.8 254 37.4
CSS0020002 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 5.1e-26 124.4 257 38.1
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 3.3e-25 121.7 256 37.5
Actinidia35565 Actinidia chinensis HOM05D007570 ORTHO05D009365 3.6e-24 118.2 257 38.1
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 3.4e-22 111.7 108 48.1
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 2.9e-21 108.6 87 60.9
Nitab4.5_0008329g0060 Nicotiana tabacum HOM05D001281 ORTHO05D009365 3.8e-21 108.2 256 36.7
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 4.9e-21 107.8 144 38.2
Peaxi162Scf00037g01028 Petunia axillaris HOM05D007570 ORTHO05D009365 1.9e-20 105.9 253 30.8
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 3.2e-20 105.1 257 35.0
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 9.3e-20 103.6 87 58.6
MD11G1161100 Malus domestica HOM05D007570 ORTHO05D009365 3.5e-19 101.7 144 63.2
MD11G1161200 Malus domestica HOM05D007570 ORTHO05D009365 6.0e-19 100.9 193 37.8
CiPaw.05G211100 Carya illinoinensis HOM05D007570 ORTHO05D009365 7.8e-19 100.5 126 44.4
CANSAT78G1681 Cannabis sativa HOM05D007570 ORTHO05D009365 1.0e-18 100.1 81 55.6
Cfa016108 Carpinus fangiana HOM05D007570 ORTHO05D009365 3.0e-18 98.6 84 53.6
MD03G1142100 Malus domestica HOM05D007570 ORTHO05D009365 6.6e-18 97.4 195 35.4
Potri.019G043101 Populus trichocarpa HOM05D007570 ORTHO05D009365 6.6e-18 97.4 79 57.0
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 8.7e-18 97.1 79 57.0
Atru.chr6.18 Acer truncatum HOM05D007570 ORTHO05D009365 1.9e-17 95.9 81 54.3
FAN01G3111 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.9e-17 95.9 83 55.4
Ciclev10030585m.g Citrus clementina HOM05D007570 ORTHO05D009365 3.3e-17 95.1 250 42.8
FvH4_7g02371 Fragaria vesca HOM05D007570 ORTHO05D009365 4.3e-17 94.7 82 56.1
FAN06G1073 Fragaria x ananassa HOM05D007570 ORTHO05D009365 4.3e-17 94.7 82 56.1
Lalb_Chr16g0383631 Lupinus albus HOM05D007570 ORTHO05D009365 4.3e-17 94.7 161 35.4
Thecc.05G226900 Theobroma cacao HOM05D007570 ORTHO05D009365 4.3e-17 94.7 83 56.6
Medtr4g089005 Medicago truncatula HOM05D007570 ORTHO05D009365 5.6e-17 94.4 102 45.1
Gohir.A01G216000 Gossypium hirsutum HOM05D007570 ORTHO05D009365 2.1e-16 92.4 87 51.7
CAN.G665.19 Capsicum annuum HOM05D007570 ORTHO05D009365 2.8e-16 92.0 144 48.6
Duzib106G0838 Durio zibethinus HOM05D007570 ORTHO05D009365 2.8e-16 92.0 83 55.4
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 3.6e-16 91.7 81 49.4
Gorai.002G249100 Gossypium raimondii HOM05D007570 ORTHO05D009365 3.6e-16 91.7 86 52.3
TWI34G1038 Tripterygium wilfordii HOM05D007570 ORTHO05D009365 3.6e-16 91.7 83 50.6
Gohir.D01G204800 Gossypium hirsutum HOM05D007570 ORTHO05D009365 4.8e-16 91.3 86 52.3
Lj4g0005287 Lotus japonicus HOM05D007570 ORTHO05D009365 8.1e-16 90.5 80 53.8
MD00G1202300 Malus domestica HOM05D007570 ORTHO05D009365 1.4e-15 89.7 144 61.1
Psat7g112960 Pisum sativum HOM05D007570 ORTHO05D009365 1.4e-15 89.7 81 48.1
Sopen01g043040 Solanum pennellii HOM05D007570 ORTHO05D009365 1.4e-15 89.7 144 55.6
Medtr8g064830 Medicago truncatula HOM05D007570 ORTHO05D009365 3.1e-15 88.6 80 47.5
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 6.9e-15 87.4 111 40.5
VMungo0251G2923 Vigna mungo HOM05D007570 ORTHO05D009365 6.9e-15 87.4 80 48.8
Cpa.g.sc909.2 Carica papaya HOM05D007570 ORTHO05D009365 9.0e-15 87.0 240 29.2
Glyma.07G194900 Glycine max HOM05D007570 ORTHO05D009365 1.2e-14 86.7 80 50.0
TPR.G12015 Trifolium pratense HOM05D007570 ORTHO05D009365 1.5e-14 86.3 80 46.2
Phvul.002G227100 Phaseolus vulgaris HOM05D007570 ORTHO05D009365 1.3e-13 83.2 80 46.2
PGSC0003DMG400024750 Solanum tuberosum HOM05D007570 ORTHO05D009365 1.7e-13 82.8 144 56.9
Eucgr.F03126 Eucalyptus grandis HOM05D007570 ORTHO05D009365 4.9e-13 81.3 79 44.3
Eucgr.A02378 Eucalyptus grandis HOM05D007570 ORTHO05D009365 1.4e-12 79.7 77 45.5
MSTRG.27980 Avicennia marina HOM05D007570 ORTHO05D009365 4.2e-12 78.2 255 32.9
arahy.Tifrunner.gnm1.ann1.3SI8EE Arachis hypogaea HOM05D000112 ORTHO05D009365 3.5e-11 75.1 68 50.0
arahy.Tifrunner.gnm1.ann1.K3ZWQ5 Arachis hypogaea HOM05D000112 ORTHO05D009365 3.5e-11 75.1 68 50.0
Thhalv10012597m.g Eutrema salsugineum HOM05D007570 ORTHO05D009365 1.3e-10 73.2 135 32.6
Manes.08G159400 Manihot esculenta HOM05D007570 ORTHO05D009365 1.5e-09 69.7 62 53.2
Aqoxy5G04288 Aquilegia oxysepala HOM05D007570 ORTHO05D009365 5.6e-09 67.8 181 31.5
TAR625G0236 Trochodendron aralioides HOM05D007570 ORTHO05D009365 5.6e-09 67.8 51 56.9
ECA234G3939 Erigeron canadensis HOM05D007570 ORTHO05D009365 9.6e-09 67.0 112 35.7
Lj5C430G10 Lonicera japonica HOM05D007570 ORTHO05D009365 9.6e-09 67.0 46 58.7
Nn1g08626 Nelumbo nucifera HOM05D007570 ORTHO05D009365 1.3e-08 66.6 86 43.0
HanXRQChr10g0294781 Helianthus annuus HOM05D007570 ORTHO05D009365 2.1e-08 65.9 108 35.2
AL6G25570 Arabidopsis lyrata HOM05D007570 ORTHO05D009365 4.8e-08 64.7 144 52.8
RcHm_v2.0_Chr1g0384651 Rosa chinensis HOM05D007570 ORTHO05D009365 6.2e-08 64.3 221 42.5
Sed0001810 Sechium edule HOM05D002453 ORTHO05D002107 6.2e-08 64.3 104 37.5
Sed0019268 Sechium edule HOM05D002453 ORTHO05D002107 6.2e-08 64.3 104 37.5
ClCG04G012320 Citrullus lanatus HOM05D002453 ORTHO05D002107 8.1e-08 63.9 100 38.0
DCAR_022873 Daucus carota HOM05D000175 ORTHO05D010751 8.1e-08 63.9 112 35.7
TPR.G18613 Trifolium pratense HOM05D007409 ORTHO05D009264 1.1e-07 63.5 107 33.6
Psat6g097560 Pisum sativum HOM05D007409 ORTHO05D009264 1.4e-07 63.2 118 31.4
Oeu043366.2 Olea europaea HOM05D007570 ORTHO05D009365 1.8e-07 62.8 49 53.1
Aa31LG11G14260 Aethionema arabicum HOM05D006569 ORTHO05D007515 2.4e-07 62.4 112 27.7
Nitab4.5_0000353g0130 Nicotiana tabacum HOM05D002737 ORTHO05D009499 2.4e-07 62.4 103 34.0
Prupe.2G007100 Prunus persica HOM05D007570 ORTHO05D009365 2.4e-07 62.4 48 54.2
MELO3C024749.2 Cucumis melo HOM05D021906 ORTHO05D009365 3.1e-07 62.0 68 47.1
Migut.N02077 Erythranthe guttata HOM05D007570 ORTHO05D009365 5.3e-07 61.2 45 46.7
FAN11G3989 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.9e-07 60.8 113 35.4
FAN21G3095 Fragaria x ananassa HOM05D000162 ORTHO05D000090 6.9e-07 60.8 110 33.6
FAN02G2208 Fragaria x ananassa HOM05D000001 ORTHO05D009676 1.2e-06 60.1 125 26.4
Glyma.07G102000 Glycine max HOM05D010072 ORTHO05D011797 1.2e-06 60.1 82 37.8
FvH4_3g39940 Fragaria vesca HOM05D000162 ORTHO05D000090 1.5e-06 59.7 111 30.6
AagrBONN_evm.TU.Sc2ySwM_276.5__6 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.0e-06 59.3 287 22.3
SalBow3G4252 Salvia bowleyana HOM05D007570 ORTHO05D009365 2.6e-06 58.9 49 44.9
FvH4_3g39890 Fragaria vesca HOM05D000162 ORTHO05D000090 3.4e-06 58.5 111 30.6
SMO203G0052 Selaginella moellendorffii HOM05D005973 ORTHO05D038438 3.4e-06 58.5 116 30.2
TPR.G30959 Trifolium pratense HOM05D006895 ORTHO05D008605 3.4e-06 58.5 119 28.6
AagrBONN_evm.TU.Sc2ySwM_117.4175 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.5e-06 58.2 125 31.2
AagrBONN_evm.TU.Sc2ySwM_228.4984 Anthoceros agrestis HOM05D000001 ORTHO05D000003 4.5e-06 58.2 96 32.3
CsaV3_2G035920 Cucumis sativus L. HOM05D021906 ORTHO05D009365 4.5e-06 58.2 68 47.1
GSVIVG01013840001 Vitis vinifera HOM05D007570 ORTHO05D009365 4.5e-06 58.2 46 54.3
FAN10G4006 Fragaria x ananassa HOM05D007570 ORTHO05D009365 5.8e-06 57.8 142 51.4
Medtr8g463610 Medicago truncatula HOM05D006503 ORTHO05D008116 5.8e-06 57.8 97 29.9
AagrBONN_evm.TU.Sc2ySwM_344.3286 Anthoceros agrestis HOM05D000001 ORTHO05D000003 7.6e-06 57.4 125 29.6


User provided reference genes

Program Settings