Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62028005 Chenopodium quinoa HOM05D015416 ORTHO05D000004 2.9e-54 214.9 104 100.0
AUR62040900 Chenopodium quinoa HOM05D000003 ORTHO05D000006 1.2e-28 129.8 90 68.9
AUR62040808 Chenopodium quinoa HOM05D000003 ORTHO05D000006 2.7e-20 102.1 99 52.5
EL10Ac8g18990 Beta vulgaris HOM05D000003 ORTHO05D000004 2.8e-17 92.0 80 51.2
AUR62004730 Chenopodium quinoa HOM05D000482 ORTHO05D000349 4.8e-17 91.3 95 43.2
EL10Ac1g01349 Beta vulgaris HOM05D003468 ORTHO05D002806 3.1e-16 88.6 95 44.2
EL10Ac2g04418 Beta vulgaris HOM05D000003 ORTHO05D000004 3.8e-14 81.6 102 41.2
EL10As18g24162 Beta vulgaris HOM05D000003 ORTHO05D000004 8.5e-14 80.5 86 41.9
EL10Ac4g08380 Beta vulgaris HOM05D000003 ORTHO05D000004 1.6e-12 76.3 70 51.4
EL10Ac9g20916 Beta vulgaris HOM05D000003 ORTHO05D000004 3.6e-12 75.1 95 40.0
AUR62006991 Chenopodium quinoa HOM05D001682 ORTHO05D001625 6.7e-11 70.9 84 39.3
AUR62015302 Chenopodium quinoa HOM05D000003 ORTHO05D000004 8.8e-11 70.5 70 45.7
AUR62016609 Chenopodium quinoa HOM05D000003 ORTHO05D000167 4.8e-09 64.7 73 43.8
RhsimUnG0236900 Rhododendron simsii HOM05D000003 ORTHO05D000004 6.3e-09 64.3 100 34.0
CSS0031820 Camellia sinensis var. sinensis HOM05D000698 ORTHO05D000004 1.8e-08 62.8 93 33.3
Atru.chr11.920 Acer truncatum HOM05D000003 ORTHO05D000004 5.3e-08 61.2 94 35.1
QL09p014828 Quercus lobata HOM05D000003 ORTHO05D000004 9.1e-08 60.5 88 38.6
AUR62002762 Chenopodium quinoa HOM05D001201 ORTHO05D001100 4.5e-07 58.2 86 36.0
Prupe.6G353900 Prunus persica HOM05D000003 ORTHO05D000004 4.5e-07 58.2 89 37.1
Sed0010093 Sechium edule HOM05D000003 ORTHO05D000004 4.5e-07 58.2 94 34.0
EL10Ac2g03433 Beta vulgaris HOM05D000003 ORTHO05D000167 5.9e-07 57.8 73 43.8
CANSAT56G0354 Cannabis sativa HOM05D000003 ORTHO05D000167 5.9e-07 57.8 87 36.8
FvH4_3g21491 Fragaria vesca HOM05D000003 ORTHO05D000004 7.7e-07 57.4 91 35.2
Rhsim02G0165900 Rhododendron simsii HOM05D000003 ORTHO05D000004 7.7e-07 57.4 86 32.6
TPR.G36801 Trifolium pratense HOM05D000003 ORTHO05D000004 7.7e-07 57.4 93 32.3
EL10Ac7g17531 Beta vulgaris HOM05D000003 ORTHO05D000004 1.3e-06 56.6 87 33.3
CiPaw.10G106100 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.3e-06 56.6 80 38.8
EL10Ac5g11069 Beta vulgaris HOM05D000003 ORTHO05D000004 1.7e-06 56.2 85 36.5
CiPaw.07G081700 Carya illinoinensis HOM05D000003 ORTHO05D000004 1.7e-06 56.2 95 31.6
TPR.G7198 Trifolium pratense HOM05D000003 ORTHO05D000004 1.7e-06 56.2 100 30.0
Actinidia31222 Actinidia chinensis HOM05D000003 ORTHO05D000006 2.2e-06 55.8 95 33.7
FvH4_7g06171 Fragaria vesca HOM05D000003 ORTHO05D000006 2.2e-06 55.8 97 29.9
Nn2g13431 Nelumbo nucifera HOM05D000003 ORTHO05D000004 2.2e-06 55.8 83 31.3
CANSAT21G1721 Cannabis sativa HOM05D000003 ORTHO05D000167 2.9e-06 55.5 71 36.6
Prupe.4G011200 Prunus persica HOM05D000003 ORTHO05D000004 2.9e-06 55.5 89 36.0
Sed0017730 Sechium edule HOM05D000003 ORTHO05D000004 2.9e-06 55.5 94 34.0
AUR62033770 Chenopodium quinoa HOM05D000003 ORTHO05D000004 3.8e-06 55.1 71 32.4
Dinv23119 Davidia involucrata HOM05D000003 ORTHO05D000004 3.8e-06 55.1 67 43.3
Rhsim11G0064100 Rhododendron simsii HOM05D000003 ORTHO05D000004 3.8e-06 55.1 95 31.6
TPR.G19381 Trifolium pratense HOM05D000003 ORTHO05D000004 3.8e-06 55.1 92 32.6
Atru.chr1.2596 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-06 54.7 98 31.6
Atru.chr11.1735 Acer truncatum HOM05D000003 ORTHO05D000126 5.0e-06 54.7 86 31.4
AUR62018161 Chenopodium quinoa HOM05D000003 ORTHO05D000167 5.0e-06 54.7 91 34.1
Lj2g0021852 Lotus japonicus HOM05D000003 ORTHO05D000126 5.0e-06 54.7 106 32.1
Prupe.6G123900 Prunus persica HOM05D000003 ORTHO05D000004 5.0e-06 54.7 89 36.0
Atru.chr2.1908 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-06 54.3 86 33.7
Atru.chr3.2934 Acer truncatum HOM05D000003 ORTHO05D000006 6.5e-06 54.3 90 32.2
Atru.chr8.1143 Acer truncatum HOM05D000003 ORTHO05D000004 6.5e-06 54.3 89 38.2
COL.COLO4_04272 Corchorus olitorius HOM05D000003 ORTHO05D000004 6.5e-06 54.3 91 33.0
Sed0020565 Sechium edule HOM05D000003 ORTHO05D000004 6.5e-06 54.3 100 34.0
Atru.chr11.1419 Acer truncatum HOM05D000003 ORTHO05D000004 8.5e-06 53.9 89 32.6
Atru.chr4.50 Acer truncatum HOM05D000003 ORTHO05D000004 8.5e-06 53.9 90 32.2
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.5e-06 53.9 92 32.6
CANSAT64G1116 Cannabis sativa HOM05D000003 ORTHO05D000004 8.5e-06 53.9 70 34.3
QL04p067637 Quercus lobata HOM05D000003 ORTHO05D000004 8.5e-06 53.9 105 29.5
QL05p018687 Quercus lobata HOM05D000106 ORTHO05D000160 8.5e-06 53.9 92 33.7
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 8.5e-06 53.9 98 33.7
Sed0024949 Sechium edule HOM05D015416 ORTHO05D023128 8.5e-06 53.9 68 39.7


User provided reference genes

Program Settings