Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 8.0e-62 240.4 130 100.0
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 8.0e-62 240.4 130 100.0
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.2e-57 226.5 130 93.1
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 1.1e-55 219.9 130 88.5
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.0e-53 213.4 130 86.9
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.3e-53 212.2 128 85.9
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 4.0e-53 211.5 130 84.6
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 5.2e-53 211.1 130 86.9
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 3.4e-52 208.4 128 83.6
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 3.4e-52 208.4 128 85.2
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 5.7e-52 207.6 130 84.6
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 7.5e-52 207.2 130 82.3
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 9.8e-52 206.8 128 85.9
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 2.2e-51 205.7 128 84.4
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 2.2e-51 205.7 128 82.8
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 3.7e-51 204.9 126 84.9
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 3.7e-51 204.9 126 84.9
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 4.9e-51 204.5 128 82.0
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 6.3e-51 204.1 127 83.5
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 8.3e-51 203.8 128 81.2
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 8.3e-51 203.8 130 82.3
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 83.6
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 1.4e-50 203.0 130 80.8
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 1.4e-50 203.0 128 84.4
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.4e-50 203.0 130 83.8
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 2.4e-50 202.2 128 81.2
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 2.4e-50 202.2 130 82.3
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 2.4e-50 202.2 128 83.6
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 2.4e-50 202.2 128 82.0
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 83.6
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 83.6
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 82.8
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 7.0e-50 200.7 130 81.5
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 7.0e-50 200.7 128 82.0
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 7.0e-50 200.7 130 80.0
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 9.2e-50 200.3 128 80.5
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 9.2e-50 200.3 130 80.0
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 9.2e-50 200.3 130 82.3
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 1.2e-49 199.9 130 80.8
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 2.0e-49 199.1 128 79.7
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 2.7e-49 198.7 128 78.9
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 3.5e-49 198.4 130 79.2
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 4.5e-49 198.0 128 78.9
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 5.9e-49 197.6 130 81.5
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 5.9e-49 197.6 128 81.2
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 7.8e-49 197.2 130 80.0
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 7.8e-49 197.2 130 78.5
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.3e-48 196.4 130 78.5
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 1.3e-48 196.4 128 81.2
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 78.5
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.7e-48 196.1 130 80.0
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 2.9e-48 195.3 130 77.7
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.9e-48 195.3 130 79.2
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 3.9e-48 194.9 130 79.2
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 3.9e-48 194.9 130 77.7
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 3.9e-48 194.9 130 77.7
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 6.6e-48 194.1 122 81.1
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 78.5
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 6.6e-48 194.1 130 76.9
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.1e-47 193.4 130 73.8
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 1.5e-47 193.0 128 78.9
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 1.9e-47 192.6 126 77.8
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 2.5e-47 192.2 128 75.8
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 3.3e-47 191.8 134 79.1
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 3.3e-47 191.8 127 77.2
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 7.3e-47 190.7 125 78.4
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 9.5e-47 190.3 128 77.3
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 9.5e-47 190.3 126 78.6
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 2.8e-46 188.7 130 74.6
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 2.8e-46 188.7 130 80.0
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 3.6e-46 188.3 128 75.8
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 3.6e-46 188.3 130 74.6
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 3.6e-46 188.3 128 75.0
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 4.7e-46 188.0 120 80.0
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 1.0e-45 186.8 130 75.4
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.3e-45 185.7 127 74.8
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 2.3e-45 185.7 122 83.6
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 4.0e-45 184.9 119 80.7
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 5.2e-45 184.5 132 75.0
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 2.6e-44 182.2 131 77.1
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 4.4e-44 181.4 130 73.8
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.7e-43 179.5 127 74.8
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 1.7e-43 179.5 112 83.9
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.4e-42 175.6 118 78.8
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 3.2e-42 175.3 128 74.2
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.2e-41 173.3 128 74.2
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 2.0e-41 172.6 136 67.6
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 3.5e-41 171.8 119 76.5
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 3.0e-40 168.7 128 71.9
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 3.0e-40 168.7 128 71.9
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 5.0e-40 167.9 125 75.2
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 8.6e-40 167.2 171 56.7
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 8.6e-40 167.2 128 71.1
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 6.2e-38 161.0 103 82.5
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 3.1e-37 158.7 107 75.7
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.0e-36 156.0 116 73.3
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 2.6e-36 155.6 128 62.5
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 4.4e-36 154.8 98 83.7
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 4.4e-36 154.8 185 53.0
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 8.3e-35 150.6 96 80.2
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 1.1e-34 150.2 128 57.8
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 4.1e-34 148.3 98 76.5
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 3.5e-33 145.2 92 82.6
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 4.6e-33 144.8 101 77.2
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 5.8e-28 127.9 120 54.2
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 1.1e-26 123.6 92 71.7
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.2e-25 120.2 94 70.2
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 3.0e-24 115.5 72 80.6
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 6.6e-24 114.4 99 54.5
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 1.5e-23 113.2 92 68.5
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 7.3e-23 110.9 93 66.7
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 1.4e-21 106.7 109 56.9
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.1e-21 105.5 66 83.3
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 2.2e-19 99.4 63 74.6
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 7.1e-18 94.4 62 77.4
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 1.2e-17 93.6 64 76.6
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 3.5e-17 92.0 62 74.2
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 6.0e-17 91.3 62 71.0
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 7.8e-17 90.9 62 74.2
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 2.3e-16 89.4 64 70.3
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.5e-15 86.7 57 80.7
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 3.6e-14 82.0 119 35.3
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 4.2e-10 68.6 115 31.3
CBR_g16047 Chara braunii HOM05D006291 ORTHO05D007669 1.2e-09 67.0 61 50.8
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 7.8e-09 64.3 40 82.5
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 2.3e-08 62.8 42 76.2


User provided reference genes

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