Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 5.8e-132 474.2 229 100.0
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 5.6e-127 457.6 227 95.6
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 2.7e-105 385.6 228 82.0
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 1.8e-88 329.7 190 82.1
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 1.5e-87 326.6 224 72.8
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 7.4e-87 324.3 224 69.6
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 1.3e-86 323.6 217 72.4
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 6.3e-86 321.2 175 82.3
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 1.8e-85 319.7 227 67.8
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 3.1e-85 318.9 230 68.7
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 4.1e-85 318.5 235 69.4
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 5.3e-85 318.2 189 78.8
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 9.1e-85 317.4 227 68.7
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 1.2e-84 317.0 200 76.0
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.5e-84 316.6 229 68.1
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 3.4e-84 315.5 234 67.5
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 4.5e-84 315.1 207 72.0
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 7.7e-84 314.3 204 73.5
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 7.7e-84 314.3 211 73.0
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 1.3e-83 313.5 227 68.3
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 1.3e-83 313.5 229 69.4
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 6.5e-83 311.2 209 73.2
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 1.1e-82 310.5 187 78.1
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 1.9e-82 309.7 223 68.6
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 4.2e-82 308.5 231 65.8
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 7.2e-82 307.8 203 71.9
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 9.4e-82 307.4 225 67.1
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 1.6e-81 306.6 210 72.9
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 1.6e-81 306.6 190 73.7
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 2.1e-81 306.2 177 77.4
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 2.7e-81 305.8 168 83.9
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 2.7e-81 305.8 218 69.7
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 3.6e-81 305.4 177 77.4
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 6.1e-81 304.7 223 66.4
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 6.1e-81 304.7 172 81.4
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 7.9e-81 304.3 210 72.4
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 7.9e-81 304.3 177 79.1
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 2.3e-80 302.8 228 64.9
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 3.0e-80 302.4 206 68.0
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 3.0e-80 302.4 219 67.6
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 3.9e-80 302.0 228 64.9
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 3.9e-80 302.0 180 77.8
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 3.9e-80 302.0 210 70.0
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 1.1e-79 300.4 183 76.5
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 1.1e-79 300.4 189 74.1
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 1.5e-79 300.1 180 75.6
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 2.0e-79 299.7 181 75.7
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 2.0e-79 299.7 234 63.2
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 2.6e-79 299.3 223 65.9
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 3.3e-79 298.9 213 70.4
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 4.4e-79 298.5 224 67.4
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 4.4e-79 298.5 185 76.8
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 4.4e-79 298.5 172 76.7
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 5.7e-79 298.1 229 63.3
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 5.7e-79 298.1 223 65.5
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 7.4e-79 297.7 234 63.7
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 1.3e-78 297.0 184 76.1
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 1.7e-78 296.6 226 66.4
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 2.2e-78 296.2 178 77.5
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 3.7e-78 295.4 167 81.4
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 3.7e-78 295.4 168 79.8
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 3.7e-78 295.4 210 67.1
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 6.3e-78 294.7 203 71.4
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 6.3e-78 294.7 177 77.4
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 6.3e-78 294.7 177 76.8
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 6.3e-78 294.7 177 76.8
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 6.3e-78 294.7 177 76.8
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 6.3e-78 294.7 231 65.4
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 8.2e-78 294.3 177 76.3
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 8.2e-78 294.3 177 76.3
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 8.2e-78 294.3 177 76.3
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 8.2e-78 294.3 156 82.1
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 8.2e-78 294.3 226 65.9
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 1.1e-77 293.9 185 74.1
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 1.8e-77 293.1 220 66.4
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 2.4e-77 292.7 189 74.6
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 2.4e-77 292.7 210 68.6
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 3.1e-77 292.4 177 75.7
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 3.1e-77 292.4 177 75.7
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 3.1e-77 292.4 179 76.5
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 4.1e-77 292.0 195 73.8
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 4.1e-77 292.0 177 76.3
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 2.0e-76 289.7 178 73.6
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 4.5e-76 288.5 157 79.0
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 7.7e-76 287.7 186 69.4
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 9.4e-74 280.8 202 68.8
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 6.1e-73 278.1 191 72.3
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 5.2e-72 275.0 158 81.6
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 6.7e-72 274.6 208 65.9
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 7.4e-71 271.2 174 73.0
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 2.2e-70 269.6 173 74.0
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 8.2e-70 267.7 212 64.2
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 3.5e-68 262.3 158 75.9
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 5.2e-64 248.4 184 64.7
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 5.2e-64 248.4 215 56.3
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 6.3e-62 241.5 158 73.4
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 9.4e-58 227.6 155 65.8
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 7.0e-53 211.5 206 52.9
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 7.0e-53 211.5 183 60.7
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 1.2e-52 210.7 147 70.1
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 2.0e-52 209.9 167 65.3
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 5.9e-52 208.4 107 87.9
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 1.3e-43 180.6 189 52.9
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 2.5e-42 176.4 130 61.5
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 3.6e-41 172.6 125 62.4
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 1.5e-34 150.6 190 44.2
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 1.4e-29 134.0 96 67.7
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 1.1e-26 124.4 232 37.9
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 1.7e-14 84.0 41 87.8
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 1.9e-13 80.5 48 75.0
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 2.0e-07 60.5 47 59.6


User provided reference genes

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