Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027710 Chenopodium quinoa HOM05D006665 ORTHO05D008327 3.0e-201 704.9 346 100.0
EL10Ac8g20571 Beta vulgaris HOM05D006665 ORTHO05D008327 2.8e-162 575.5 349 79.1
Sc05g0006960 Simmondsia chinensis HOM05D006665 ORTHO05D008327 8.5e-135 484.2 359 65.5
Cfa000642 Carpinus fangiana HOM05D006665 ORTHO05D008327 4.1e-129 465.3 365 62.5
QL05p048519 Quercus lobata HOM05D006665 ORTHO05D008327 4.1e-129 465.3 365 61.9
PGR042G0915 Punica granatum HOM05D006665 ORTHO05D008327 7.2e-126 454.5 360 60.8
CANSAT80G2447 Cannabis sativa HOM05D000074 ORTHO05D000220 1.1e-123 447.2 364 59.6
TWI73G0293 Tripterygium wilfordii HOM05D006665 ORTHO05D008327 1.3e-122 443.7 360 58.9
CiPaw.09G072200 Carya illinoinensis HOM05D006665 ORTHO05D008327 5.3e-121 438.3 364 57.7
CSS0008142 Camellia sinensis var. sinensis HOM05D006665 ORTHO05D008327 6.9e-121 438.0 364 59.1
Manes.17G058400 Manihot esculenta HOM05D006665 ORTHO05D008327 3.4e-120 435.6 360 59.7
Lj2C318T4 Lonicera japonica HOM05D006665 ORTHO05D008327 2.2e-119 433.0 343 60.9
ClCG03G007500 Citrullus lanatus HOM05D000074 ORTHO05D000220 2.9e-119 432.6 346 60.7
HanXRQChr15g0480791 Helianthus annuus HOM05D006665 ORTHO05D008327 5.0e-119 431.8 363 59.5
GSVIVG01021249001 Vitis vinifera HOM05D006665 ORTHO05D008327 5.0e-119 431.8 360 59.2
Aqoxy4G00257 Aquilegia oxysepala HOM05D006665 ORTHO05D008327 8.5e-119 431.0 363 57.9
Ah.14g087040 Amaranthus hybridus HOM05D006665 ORTHO05D008327 1.4e-118 430.3 390 60.0
TAR627G0088 Trochodendron aralioides HOM05D006665 ORTHO05D008327 1.9e-118 429.9 368 56.8
Eucgr.E04353 Eucalyptus grandis HOM05D006665 ORTHO05D008327 2.5e-118 429.5 371 57.7
THA.LOC104812882 Tarenaya hassleriana HOM05D006665 ORTHO05D008327 4.2e-118 428.7 362 57.7
Nn3g21119 Nelumbo nucifera HOM05D006665 ORTHO05D008327 1.2e-117 427.2 370 57.6
Cc02_g15490 Coffea canephora HOM05D006665 ORTHO05D008327 1.6e-117 426.8 364 58.8
Lalb_Chr13g0295211 Lupinus albus HOM05D006665 ORTHO05D008327 3.6e-117 425.6 365 59.5
Ciclev10015641m.g Citrus clementina HOM05D006665 ORTHO05D008327 4.7e-117 425.2 367 58.3
Eucgr.E02766 Eucalyptus grandis HOM05D006665 ORTHO05D008327 4.7e-117 425.2 370 57.3
CsaV3_1G033140 Cucumis sativus L. HOM05D006665 ORTHO05D008327 1.0e-116 424.1 365 57.5
Duzib235G0558 Durio zibethinus HOM05D006665 ORTHO05D008327 1.0e-116 424.1 364 56.9
FvH4_1g07520 Fragaria vesca HOM05D006665 ORTHO05D008327 1.0e-116 424.1 371 57.4
Thecc.06G166800 Theobroma cacao HOM05D006665 ORTHO05D008327 1.4e-116 423.7 363 56.7
Nitab4.5_0008526g0030 Nicotiana tabacum HOM05D006665 ORTHO05D008327 1.8e-116 423.3 363 58.1
PGSC0003DMG400028425 Solanum tuberosum HOM05D006665 ORTHO05D008327 3.9e-116 422.2 364 56.3
Potri.011G069700 Populus trichocarpa HOM05D006665 ORTHO05D008327 5.2e-116 421.8 365 58.6
FAN26G0384 Fragaria x ananassa HOM05D006665 ORTHO05D008327 6.7e-116 421.4 371 56.9
Sed0010934 Sechium edule HOM05D006665 ORTHO05D008327 6.7e-116 421.4 363 57.9
Sopen02g021210 Solanum pennellii HOM05D006665 ORTHO05D008327 1.1e-115 420.6 364 55.8
Solyc02g072230.3 Solanum lycopersicum HOM05D006665 ORTHO05D008327 2.0e-115 419.9 364 55.5
Gohir.A10G035200 Gossypium hirsutum HOM05D006665 ORTHO05D008327 2.6e-115 419.5 364 56.0
RcHm_v2.0_Chr5g0011451 Rosa chinensis HOM05D006665 ORTHO05D008327 2.6e-115 419.5 371 57.4
FAN19G1242 Fragaria x ananassa HOM05D006665 ORTHO05D008327 4.4e-115 418.7 372 57.3
PSO170G0566 Papaver somniferum HOM05D000074 ORTHO05D000220 4.4e-115 418.7 367 56.4
FAN23G0824 Fragaria x ananassa HOM05D006665 ORTHO05D008327 5.7e-115 418.3 371 56.6
Gorai.011G037800 Gossypium raimondii HOM05D006665 ORTHO05D008327 5.7e-115 418.3 364 55.5
Gohir.D10G035900 Gossypium hirsutum HOM05D006665 ORTHO05D008327 9.7e-115 417.5 364 55.5
Prupe.4G065800 Prunus persica HOM05D006665 ORTHO05D008327 9.7e-115 417.5 368 57.9
MBI07_g09544_MAGBIO Magnolia biondii HOM05D006665 ORTHO05D008327 1.3e-114 417.2 368 57.3
DCAR_005186 Daucus carota HOM05D006665 ORTHO05D008327 2.8e-114 416.0 367 55.0
Sabra11G0053800 Salix brachista HOM05D006665 ORTHO05D008327 2.8e-114 416.0 365 57.8
MD05G1296500 Malus domestica HOM05D006665 ORTHO05D008327 9.1e-113 411.0 367 56.7
COL.COLO4_31251 Corchorus olitorius HOM05D006665 ORTHO05D008327 2.0e-112 409.8 383 53.8
Dinv32346 Davidia involucrata HOM05D006665 ORTHO05D008327 5.9e-112 408.3 363 58.4
MSTRG.7424 Avicennia marina HOM05D006665 ORTHO05D008327 1.3e-111 407.1 365 58.6
Nitab4.5_0000437g0180 Nicotiana tabacum HOM05D006665 ORTHO05D008327 2.9e-111 406.0 371 55.3
Migut.M01013 Erythranthe guttata HOM05D006665 ORTHO05D008327 3.2e-110 402.5 368 54.6
ECA236G1698 Erigeron canadensis HOM05D000074 ORTHO05D000220 5.5e-110 401.7 359 54.9
AT5G45760 Arabidopsis thaliana HOM05D006665 ORTHO05D008327 1.6e-109 400.2 366 55.2
Sp2g10670 Schrenkiella parvula HOM05D006665 ORTHO05D008327 8.0e-109 397.9 361 55.1
AL8G12850 Arabidopsis lyrata HOM05D006665 ORTHO05D008327 1.4e-108 397.1 366 54.4
Carub.0008s0223 Capsella rubella HOM05D006665 ORTHO05D008327 3.0e-108 396.0 366 53.8
FAN26G1216 Fragaria x ananassa HOM05D006665 ORTHO05D008327 3.0e-108 396.0 356 56.7
CARHR176220 Cardamine hirsuta HOM05D006665 ORTHO05D008327 5.2e-108 395.2 365 53.7
A09p21920 Brassica napus HOM05D006665 ORTHO05D008327 1.2e-107 394.0 365 55.9
arahy.Tifrunner.gnm1.ann1.L41MS4 Arachis hypogaea HOM05D006665 ORTHO05D008327 1.5e-107 393.7 345 58.8
BolC9t55679H Brassica oleracea HOM05D006665 ORTHO05D008327 2.0e-107 393.3 365 55.3
arahy.Tifrunner.gnm1.ann1.UF726L Arachis hypogaea HOM05D006665 ORTHO05D008327 4.4e-107 392.1 347 59.1
Phvul.002G240300 Phaseolus vulgaris HOM05D006665 ORTHO05D008327 4.4e-107 392.1 365 53.7
C09p28090 Brassica napus HOM05D006665 ORTHO05D008327 5.7e-107 391.7 365 55.3
Peaxi162Scf00371g00319 Petunia axillaris HOM05D006665 ORTHO05D008327 1.7e-106 390.2 347 56.5
Medtr8g086605 Medicago truncatula HOM05D006665 ORTHO05D008327 2.8e-106 389.4 370 53.5
BcaB07g30869 Brassica carinata HOM05D006665 ORTHO05D008327 8.2e-106 387.9 365 54.5
Lj4g0005276 Lotus japonicus HOM05D000074 ORTHO05D008327 2.4e-105 386.3 364 54.4
BraA09t37795Z Brassica rapa HOM05D006665 ORTHO05D008327 1.2e-104 384.0 358 55.9
Glyma.05G160032 Glycine max HOM05D006665 ORTHO05D008327 1.2e-104 384.0 366 54.1
Glyma.08G117600 Glycine max HOM05D006665 ORTHO05D008327 2.7e-104 382.9 365 52.6
BcaC04g21745 Brassica carinata HOM05D006665 ORTHO05D008327 1.7e-103 380.2 359 54.9
TPR.G6756 Trifolium pratense HOM05D006665 ORTHO05D008327 5.0e-103 378.6 366 52.2
Sabra11G0057300 Salix brachista HOM05D000074 ORTHO05D000220 9.4e-102 374.4 348 54.9
Os01g0205100 Oryza sativa ssp. japonica HOM05D006665 ORTHO05D008327 5.2e-100 368.6 364 51.6
Aa31LG9G7310 Aethionema arabicum HOM05D006665 ORTHO05D008327 1.5e-99 367.1 365 52.3
Thhalv10000923m.g Eutrema salsugineum HOM05D006665 ORTHO05D008327 3.4e-99 365.9 390 50.3
AUR62039464 Chenopodium quinoa HOM05D006665 ORTHO05D008327 4.7e-93 345.5 182 94.5
ATR0012G051 Amborella trichopoda HOM05D006665 ORTHO05D008327 2.4e-81 306.6 309 50.8
SalBow8G2667 Salvia bowleyana HOM05D000074 ORTHO05D000220 2.4e-81 306.6 379 45.4
SEGI_17628 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 7.0e-81 305.1 373 41.8
Actinidia07650 Actinidia chinensis HOM05D006665 ORTHO05D008327 1.1e-76 291.2 242 57.4
CDE06G0006 Ceratophyllum demersum HOM05D006665 ORTHO05D008327 1.4e-68 264.2 349 45.0
Pp3c18_2320 Physcomitrium patens HOM05D006665 ORTHO05D008327 1.9e-65 253.8 370 37.8
vmacro16044 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 4.1e-65 252.7 215 58.1
Zm00001eb120830 Zea mays HOM05D006665 ORTHO05D008327 1.5e-62 244.2 297 46.1
Mapoly0020s0147 Marchantia polymorpha HOM05D006665 ORTHO05D008327 2.8e-61 240.0 363 37.2
VMungo0251G1318 Vigna mungo HOM05D006665 ORTHO05D008327 1.1e-60 238.0 211 55.0
Haze_06187 Corylus avellana HOM05D006665 ORTHO05D008327 1.3e-58 231.1 213 57.7
Hund25815 Selenicereus undatus HOM05D006665 ORTHO05D008327 2.4e-57 226.9 178 65.2
SMO118G0425 Selaginella moellendorffii HOM05D006665 ORTHO05D008327 9.2e-57 224.9 367 35.1
Lsat_1_v5_gn_7_25921 Lactuca sativa HOM05D006665 ORTHO05D008327 1.2e-56 224.6 197 55.8
Rhsim02G0145600 Rhododendron simsii HOM05D006665 ORTHO05D008327 3.5e-56 223.0 200 56.5
Atru.chr10.1583 Acer truncatum HOM05D006665 ORTHO05D008327 3.6e-53 213.0 179 56.4
Dinv12760 Davidia involucrata HOM05D006665 ORTHO05D008327 1.8e-52 210.7 234 48.3
Atru.chr10.1584 Acer truncatum HOM05D006665 ORTHO05D008327 1.1e-49 201.4 179 55.9
Hma1.2p1_0113F.1_g055090 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 7.1e-49 198.7 207 52.2
Hma1.2p1_0113F.1_g055096 Hydrangea macrophylla HOM05D006665 ORTHO05D008327 7.1e-49 198.7 207 52.2
AagrBONN_evm.TU.Sc2ySwM_117.2766 Anthoceros agrestis HOM05D006665 ORTHO05D008327 3.5e-48 196.4 319 32.6
BcaB06g27285 Brassica carinata HOM05D006665 ORTHO05D008327 3.6e-45 186.4 249 43.0
CBR_g34019 Chara braunii HOM05D006665 ORTHO05D008327 1.1e-41 174.9 399 30.6
BcaB04g18653 Brassica carinata HOM05D006665 ORTHO05D008327 1.8e-39 167.5 162 53.7
Cpa.g.sc7.98 Carica papaya HOM05D006665 ORTHO05D008327 7.4e-38 162.2 134 59.0
Oeu043117.1 Olea europaea HOM05D006665 ORTHO05D008327 1.4e-36 157.9 146 54.8
SGA_v2.0_scaffold1G00072 Striga asiatica HOM05D006665 ORTHO05D008327 3.1e-36 156.8 123 59.3
Psat2g000080 Pisum sativum HOM05D006665 ORTHO05D008327 1.1e-33 148.3 139 54.7
Haze_06186 Corylus avellana HOM05D006665 ORTHO05D008327 4.2e-33 146.4 176 46.0
Psat7g069080 Pisum sativum HOM05D006665 ORTHO05D008327 1.8e-31 141.0 122 54.9
Psat7g069040 Pisum sativum HOM05D006665 ORTHO05D008327 3.7e-29 133.3 248 38.3
vmacro16043 Vaccinium macrocarpon HOM05D006665 ORTHO05D008327 6.2e-29 132.5 101 60.4
arahy.Tifrunner.gnm1.ann1.XDX40G Arachis hypogaea HOM05D006665 ORTHO05D008327 1.3e-21 108.2 85 62.4
RcHm_v2.0_Chr5g0011471 Rosa chinensis HOM05D006665 ORTHO05D008327 8.5e-18 95.5 178 34.3
arahy.Tifrunner.gnm1.ann1.H6TAT4 Arachis hypogaea HOM05D006665 ORTHO05D008327 3.2e-17 93.6 88 56.8
SEGI_34445 Sequoiadendron giganteum HOM05D006665 ORTHO05D008327 9.4e-17 92.0 101 36.6
Cre16.g678400 Chlamydomonas reinhardtii HOM05D006665 ORTHO05D008327 3.0e-15 87.0 233 27.9
FAN25G1258 Fragaria x ananassa HOM05D006665 ORTHO05D008327 4.8e-13 79.7 65 61.5
Sabra04G0038600 Salix brachista HOM05D000074 ORTHO05D000220 4.1e-12 76.6 102 44.1
MCO11G387 Micromonas commoda HOM05D006665 ORTHO05D008327 2.9e-10 70.5 285 23.9
VMungo0251G0552 Vigna mungo HOM05D006665 ORTHO05D008327 2.9e-10 70.5 73 46.6
FvH4_3g07410 Fragaria vesca HOM05D006665 ORTHO05D008327 8.5e-10 68.9 152 36.2
FAN11G1287 Fragaria x ananassa HOM05D006665 ORTHO05D008327 1.9e-09 67.8 168 32.7
arahy.Tifrunner.gnm1.ann1.IN0C4L Arachis hypogaea HOM05D006665 ORTHO05D012122 2.0e-06 57.8 60 51.7


User provided reference genes

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