Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027685 Chenopodium quinoa HOM05D001474 ORTHO05D138152 9.3e-101 370.2 180 100.0
AUR62004185 Chenopodium quinoa HOM05D001474 ORTHO05D001461 3.5e-15 85.9 55 70.9
AUR62013685 Chenopodium quinoa HOM05D001474 ORTHO05D001461 1.0e-14 84.3 55 69.1
EL10Ac1g00863 Beta vulgaris HOM05D001474 ORTHO05D001461 2.5e-13 79.7 55 67.3
Eucgr.E01451 Eucalyptus grandis HOM05D001474 ORTHO05D001461 1.2e-10 70.9 55 56.4
GSVIVG01027655001 Vitis vinifera HOM05D001474 ORTHO05D001461 1.5e-10 70.5 55 58.2
CANSAT56G4331 Cannabis sativa HOM05D001474 ORTHO05D001461 2.6e-10 69.7 55 58.2
Atru.chr5.276 Acer truncatum HOM05D001474 ORTHO05D001461 3.4e-10 69.3 55 52.7
Nitab4.5_0000457g0040 Nicotiana tabacum HOM05D001474 ORTHO05D001461 3.4e-10 69.3 66 50.0
Potri.014G067300 Populus trichocarpa HOM05D001474 ORTHO05D001461 3.4e-10 69.3 54 55.6
Sabra14G0047300 Salix brachista HOM05D001474 ORTHO05D001461 3.4e-10 69.3 54 55.6
Solyc01g091070.3 Solanum lycopersicum HOM05D001474 ORTHO05D001461 4.4e-10 68.9 55 54.5
Sopen01g036820 Solanum pennellii HOM05D001474 ORTHO05D001461 4.4e-10 68.9 55 54.5
PGSC0003DMG400026008 Solanum tuberosum HOM05D001474 ORTHO05D001461 4.4e-10 68.9 55 54.5
Dinv44138 Davidia involucrata HOM05D000036 ORTHO05D001461 5.8e-10 68.6 43 65.1
Cpa.g.c30120 Carica papaya HOM05D001474 ORTHO05D001461 7.5e-10 68.2 57 52.6
MD02G1206000 Malus domestica HOM05D001474 ORTHO05D001461 7.5e-10 68.2 43 65.1
Nn1g01106 Nelumbo nucifera HOM05D001474 ORTHO05D001461 9.8e-10 67.8 55 52.7
TAR375G0828 Trochodendron aralioides HOM05D001474 ORTHO05D001461 9.8e-10 67.8 55 54.5
CSS0019526 Camellia sinensis var. sinensis HOM05D001474 ORTHO05D001461 1.3e-09 67.4 55 54.5
COL.COLO4_12520 Corchorus olitorius HOM05D001474 ORTHO05D001461 1.3e-09 67.4 55 56.4
Prupe.2G141300 Prunus persica HOM05D001474 ORTHO05D001461 1.3e-09 67.4 57 50.9
MSTRG.17173 Avicennia marina HOM05D001474 ORTHO05D001461 1.7e-09 67.0 55 54.5
Dinv32361 Davidia involucrata HOM05D001474 ORTHO05D001461 1.7e-09 67.0 43 65.1
vmacro13424 Vaccinium macrocarpon HOM05D001474 ORTHO05D001461 1.7e-09 67.0 55 54.5
Lj7A531T58 Lonicera japonica HOM05D001474 ORTHO05D001461 2.2e-09 66.6 43 60.5
Peaxi162Scf00013g02918 Petunia axillaris HOM05D001474 ORTHO05D001461 2.2e-09 66.6 55 50.9
Ciclev10020473m.g Citrus clementina HOM05D001474 ORTHO05D001461 2.9e-09 66.2 55 52.7
Aqoxy7G00709 Aquilegia oxysepala HOM05D001474 ORTHO05D001461 3.7e-09 65.9 43 62.8
FAN03G2074 Fragaria x ananassa HOM05D001474 ORTHO05D001461 3.7e-09 65.9 44 65.9
Manes.01G267700 Manihot esculenta HOM05D001474 ORTHO05D001461 3.7e-09 65.9 54 55.6
SalBow5G3084 Salvia bowleyana HOM05D001474 ORTHO05D001461 4.9e-09 65.5 40 70.0
Sc23g0001150 Simmondsia chinensis HOM05D001474 ORTHO05D001461 4.9e-09 65.5 55 52.7
THA.LOC104802454 Tarenaya hassleriana HOM05D001474 ORTHO05D001461 4.9e-09 65.5 54 53.7
MSTRG.20735 Avicennia marina HOM05D001474 ORTHO05D001461 6.4e-09 65.1 43 62.8
Cfa011193 Carpinus fangiana HOM05D001474 ORTHO05D001461 6.4e-09 65.1 55 52.7
Haze_02654 Corylus avellana HOM05D001474 ORTHO05D001461 6.4e-09 65.1 55 52.7
Migut.B01612 Erythranthe guttata HOM05D001474 ORTHO05D001461 6.4e-09 65.1 55 52.7
Migut.O00813 Erythranthe guttata HOM05D001474 ORTHO05D001461 6.4e-09 65.1 55 52.7
Nitab4.5_0010730g0010 Nicotiana tabacum HOM05D001474 ORTHO05D001461 6.4e-09 65.1 55 52.7
SGA_v2.0_scaffold153G36983 Striga asiatica HOM05D001474 ORTHO05D001461 6.4e-09 65.1 43 65.1
ECA236G0927 Erigeron canadensis HOM05D001474 ORTHO05D001461 8.3e-09 64.7 42 66.7
HanXRQChr06g0169451 Helianthus annuus HOM05D001474 ORTHO05D001461 8.3e-09 64.7 42 66.7
PGR042G1031 Punica granatum HOM05D001474 ORTHO05D001461 8.3e-09 64.7 72 48.6
FvH4_7g11350 Fragaria vesca HOM05D001474 ORTHO05D001461 1.1e-08 64.3 55 54.5
FAN06G0799 Fragaria x ananassa HOM05D001474 ORTHO05D001461 1.1e-08 64.3 55 54.5
FAN06G4417 Fragaria x ananassa HOM05D000009 ORTHO05D001461 1.1e-08 64.3 55 54.5
FAN10G3912 Fragaria x ananassa HOM05D001474 ORTHO05D001461 1.1e-08 64.3 55 54.5
FAN13G2011 Fragaria x ananassa HOM05D001474 ORTHO05D001461 1.1e-08 64.3 55 54.5
SalBow5G1473 Salvia bowleyana HOM05D001474 ORTHO05D001461 1.1e-08 64.3 56 50.0
vmacro13425 Vaccinium macrocarpon HOM05D001474 ORTHO05D001461 1.1e-08 64.3 41 68.3
CiPaw.13G034300 Carya illinoinensis HOM05D001474 ORTHO05D001461 1.4e-08 63.9 78 44.9
CiPaw.13G034400 Carya illinoinensis HOM05D001474 ORTHO05D001461 1.4e-08 63.9 78 44.9
Cc02_g24180 Coffea canephora HOM05D001474 ORTHO05D001461 1.4e-08 63.9 55 50.9
MELO3C006206.2 Cucumis melo HOM05D001474 ORTHO05D001461 1.4e-08 63.9 43 62.8
Rhsim07G0029400 Rhododendron simsii HOM05D001474 ORTHO05D001461 1.4e-08 63.9 57 52.6
Rhsim07G0029600 Rhododendron simsii HOM05D001474 ORTHO05D001461 1.4e-08 63.9 57 52.6
RhsimUnG0228100 Rhododendron simsii HOM05D001474 ORTHO05D001461 1.4e-08 63.9 57 52.6
CAN.G911.5 Capsicum annuum HOM05D001474 ORTHO05D001461 1.9e-08 63.5 42 64.3
FvH4_7g11370 Fragaria vesca HOM05D001474 ORTHO05D001461 1.9e-08 63.5 55 54.5
MD07G1118400 Malus domestica HOM05D001474 ORTHO05D001461 1.9e-08 63.5 43 62.8
MD07G1118600 Malus domestica HOM05D001474 ORTHO05D001461 1.9e-08 63.5 43 62.8
QL04p040000 Quercus lobata HOM05D001474 ORTHO05D001461 1.9e-08 63.5 90 42.2
RcHm_v2.0_Chr1g0349561 Rosa chinensis HOM05D001474 ORTHO05D001461 1.9e-08 63.5 55 52.7
RcHm_v2.0_Chr1g0349651 Rosa chinensis HOM05D001474 ORTHO05D001461 1.9e-08 63.5 55 52.7
ClCG05G002410 Citrullus lanatus HOM05D001474 ORTHO05D001461 2.4e-08 63.2 75 46.7
Duzib138G1270 Durio zibethinus HOM05D001474 ORTHO05D001461 2.4e-08 63.2 90 41.1
Hund17036 Selenicereus undatus HOM05D001474 ORTHO05D001461 2.4e-08 63.2 55 52.7
HPP92_022304 Vanilla planifolia HOM05D001474 ORTHO05D001461 2.4e-08 63.2 55 54.5
Ca_18225_v3 Cicer arietinum L. HOM05D001474 ORTHO05D001461 3.2e-08 62.8 55 50.9
Duzib138G0487 Durio zibethinus HOM05D001474 ORTHO05D001461 4.1e-08 62.4 90 41.1
TWI14G0338 Tripterygium wilfordii HOM05D001474 ORTHO05D001461 4.1e-08 62.4 43 58.1
TWI14G0591 Tripterygium wilfordii HOM05D001474 ORTHO05D001461 4.1e-08 62.4 43 58.1
TWI14G0834 Tripterygium wilfordii HOM05D001474 ORTHO05D001461 4.1e-08 62.4 43 58.1
VMungo0331G1224 Vigna mungo HOM05D001474 ORTHO05D001461 4.1e-08 62.4 55 54.5
Lsat_1_v5_gn_7_9300 Lactuca sativa HOM05D001474 ORTHO05D001461 5.4e-08 62.0 42 66.7
PSO170G4369 Papaver somniferum HOM05D001474 ORTHO05D001461 5.4e-08 62.0 54 53.7
PSO782G5252 Papaver somniferum HOM05D001474 ORTHO05D001461 5.4e-08 62.0 54 53.7
AT2G45240 Arabidopsis thaliana HOM05D001474 ORTHO05D001461 7.0e-08 61.6 54 48.1
CSS0044636 Camellia sinensis var. sinensis HOM05D001474 ORTHO05D001461 7.0e-08 61.6 43 58.1
FAN08G3567 Fragaria x ananassa HOM05D001474 ORTHO05D001461 9.2e-08 61.2 43 58.1
Thecc.01G379400 Theobroma cacao HOM05D001474 ORTHO05D001461 9.2e-08 61.2 55 49.1
Zm00001eb043920 Zea mays HOM05D001474 ORTHO05D001461 9.2e-08 61.2 54 50.0
Zm00001eb220650 Zea mays HOM05D001474 ORTHO05D001461 9.2e-08 61.2 54 51.9
CsaV3_3G009840 Cucumis sativus L. HOM05D001474 ORTHO05D001461 1.2e-07 60.8 77 44.2
Thhalv10001475m.g Eutrema salsugineum HOM05D001474 ORTHO05D001461 1.2e-07 60.8 92 37.0
Hma1.2p1_0072F.1_g038270 Hydrangea macrophylla HOM05D001474 ORTHO05D001461 1.2e-07 60.8 43 58.1
Lj3g0013625 Lotus japonicus HOM05D001474 ORTHO05D001461 1.2e-07 60.8 54 51.9
Phvul.010G080400 Phaseolus vulgaris HOM05D001474 ORTHO05D001461 1.2e-07 60.8 55 52.7
RcHm_v2.0_Chr7g0223151 Rosa chinensis HOM05D000873 ORTHO05D001461 1.6e-07 60.5 55 49.1
Sed0006162 Sechium edule HOM05D001474 ORTHO05D001461 1.6e-07 60.5 43 58.1
CDE04G1340 Ceratophyllum demersum HOM05D001474 ORTHO05D001461 2.0e-07 60.1 43 62.8
FAN01G1996 Fragaria x ananassa HOM05D000009 ORTHO05D001461 2.0e-07 60.1 55 52.7
Gohir.A12G101300 Gossypium hirsutum HOM05D001474 ORTHO05D001461 2.0e-07 60.1 55 49.1
Gorai.008G113300 Gossypium raimondii HOM05D001474 ORTHO05D001461 2.0e-07 60.1 55 49.1
Aa31LG1G26780 Aethionema arabicum HOM05D001474 ORTHO05D001461 2.7e-07 59.7 54 50.0
Carub.0004s2785 Capsella rubella HOM05D001474 ORTHO05D001461 2.7e-07 59.7 54 46.3
DCAR_008547 Daucus carota HOM05D001474 ORTHO05D001461 2.7e-07 59.7 55 47.3
Glyma.03G028800 Glycine max HOM05D001474 ORTHO05D001461 3.5e-07 59.3 54 51.9
Oeu037931.3 Olea europaea HOM05D001474 ORTHO05D001461 3.5e-07 59.3 54 51.9
TPR.G7601 Trifolium pratense HOM05D001474 ORTHO05D001461 3.5e-07 59.3 43 58.1
Glyma.01G138300 Glycine max HOM05D001474 ORTHO05D001461 4.6e-07 58.9 54 50.0
AL4G44350 Arabidopsis lyrata HOM05D001474 ORTHO05D001461 6.0e-07 58.5 54 46.3
Psat7g230720 Pisum sativum HOM05D001474 ORTHO05D001461 6.0e-07 58.5 43 58.1
Sp4g27270 Schrenkiella parvula HOM05D001474 ORTHO05D001461 6.0e-07 58.5 54 46.3
SpUn0031_0050 Schrenkiella parvula HOM05D001474 ORTHO05D001461 6.0e-07 58.5 54 46.3
VMungo0331G0694 Vigna mungo HOM05D001474 ORTHO05D001461 6.0e-07 58.5 55 49.1
arahy.Tifrunner.gnm1.ann1.8H5FPK Arachis hypogaea HOM05D001474 ORTHO05D001461 1.0e-06 57.8 55 49.1
arahy.Tifrunner.gnm1.ann1.931R8V Arachis hypogaea HOM05D001474 ORTHO05D001461 1.0e-06 57.8 55 49.1
A05p05230 Brassica napus HOM05D001474 ORTHO05D001461 1.0e-06 57.8 54 48.1
BraA05t19493Z Brassica rapa HOM05D001474 ORTHO05D001461 1.0e-06 57.8 54 48.1
Duzib133G0123 Durio zibethinus HOM05D001474 ORTHO05D001461 1.0e-06 57.8 78 42.3
MBI12_g24113_MAGBIO Magnolia biondii HOM05D002462 ORTHO05D002893 1.3e-06 57.4 55 45.5
CARHR140460 Cardamine hirsuta HOM05D001474 ORTHO05D001461 1.7e-06 57.0 54 48.1
BcaB02g08948 Brassica carinata HOM05D001474 ORTHO05D001461 2.3e-06 56.6 54 48.1
BcaC02g12234 Brassica carinata HOM05D001474 ORTHO05D001461 2.3e-06 56.6 54 48.1
C04p06150 Brassica napus HOM05D001474 ORTHO05D001461 2.3e-06 56.6 54 48.1
BolC4t22239H Brassica oleracea HOM05D001474 ORTHO05D001461 2.3e-06 56.6 54 48.1
Phvul.010G080500 Phaseolus vulgaris HOM05D001474 ORTHO05D001461 2.3e-06 56.6 43 60.5
Gohir.D12G104200 Gossypium hirsutum HOM05D001474 ORTHO05D001461 3.0e-06 56.2 55 47.3
SMO171G0038 Selaginella moellendorffii HOM05D001474 ORTHO05D001461 3.9e-06 55.8 55 45.5
Os10g0508400 Oryza sativa ssp. japonica HOM05D001474 ORTHO05D001461 8.6e-06 54.7 54 48.1


User provided reference genes

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