Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027529 Chenopodium quinoa HOM05D003420 ORTHO05D003970 3.2e-231 804.7 391 100.0
AUR62030227 Chenopodium quinoa HOM05D003420 ORTHO05D003970 3.9e-136 488.8 255 95.7
Hund17515 Selenicereus undatus HOM05D003420 ORTHO05D003970 1.5e-116 423.7 276 80.4
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 2.0e-116 423.3 278 79.1
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 2.0e-116 423.3 278 79.9
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 9.9e-116 421.0 278 80.6
Prupe.4G277400 Prunus persica HOM05D003420 ORTHO05D003970 1.7e-115 420.2 278 78.4
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 1.7e-115 420.2 277 77.6
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 8.4e-115 417.9 278 78.4
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 1.1e-114 417.5 278 78.4
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 1.4e-114 417.2 278 78.4
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 1.9e-114 416.8 278 77.3
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 2.4e-114 416.4 278 78.1
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 3.2e-114 416.0 280 79.6
CARHR290940 Cardamine hirsuta HOM05D003420 ORTHO05D003970 3.2e-114 416.0 278 78.1
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 5.5e-114 415.2 278 77.3
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 5.5e-114 415.2 277 77.3
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 7.1e-114 414.8 277 76.9
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 7.1e-114 414.8 278 78.4
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 2.1e-113 413.3 278 77.3
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 2.1e-113 413.3 278 77.3
vmacro11081 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 2.1e-113 413.3 248 83.1
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 2.1e-113 413.3 277 76.5
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 3.5e-113 412.5 278 77.7
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 3.5e-113 412.5 278 77.7
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 3.5e-113 412.5 278 77.7
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 3.5e-113 412.5 278 77.7
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 3.5e-113 412.5 278 77.7
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 4.6e-113 412.1 278 77.3
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 6.0e-113 411.8 277 76.5
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 1.0e-112 411.0 279 78.1
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 1.0e-112 411.0 277 76.9
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 1.3e-112 410.6 278 77.7
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 1.3e-112 410.6 278 77.3
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 1.3e-112 410.6 278 77.3
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 1.3e-112 410.6 278 77.3
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 1.3e-112 410.6 278 77.3
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 1.3e-112 410.6 278 77.3
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 1.3e-112 410.6 277 76.5
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 1.3e-112 410.6 278 77.3
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 1.8e-112 410.2 278 77.0
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 2.3e-112 409.8 278 77.0
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 3.0e-112 409.5 278 76.3
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 3.0e-112 409.5 278 76.6
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 6.7e-112 408.3 278 76.3
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 8.7e-112 407.9 277 75.1
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 1.5e-111 407.1 278 75.9
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 1.9e-111 406.8 277 75.8
VMungo0331G0815 Vigna mungo HOM05D003420 ORTHO05D003970 2.5e-111 406.4 248 81.9
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 4.3e-111 405.6 277 75.1
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 4.3e-111 405.6 278 75.5
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 5.6e-111 405.2 278 75.9
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 7.4e-111 404.8 278 74.8
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 1.3e-110 404.1 277 75.5
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 2.1e-110 403.3 278 75.5
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 2.1e-110 403.3 278 76.3
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 3.7e-110 402.5 278 75.5
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 4.8e-110 402.1 275 76.0
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 4.8e-110 402.1 275 76.0
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 4.8e-110 402.1 275 76.0
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 4.8e-110 402.1 275 76.0
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 4.8e-110 402.1 275 76.0
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 6.2e-110 401.7 278 75.5
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 8.1e-110 401.4 254 81.1
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 8.1e-110 401.4 254 81.1
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 8.1e-110 401.4 278 74.8
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 1.1e-109 401.0 278 74.1
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 1.4e-109 400.6 277 74.7
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 3.1e-109 399.4 278 74.1
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 3.1e-109 399.4 277 75.5
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 3.1e-109 399.4 278 75.2
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 5.3e-109 398.7 277 75.5
RcHm_v2.0_Chr1g0335041 Rosa chinensis HOM05D003420 ORTHO05D003970 5.3e-109 398.7 278 75.9
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 6.9e-109 398.3 278 73.7
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 9.0e-109 397.9 277 74.4
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 1.2e-108 397.5 277 72.9
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 2.0e-108 396.7 277 75.1
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 5.8e-108 395.2 278 74.1
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 1.3e-107 394.0 277 73.3
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 2.2e-107 393.3 277 73.3
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 2.2e-107 393.3 277 73.3
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 2.9e-107 392.9 254 77.6
Lj4C710G5 Lonicera japonica HOM05D003420 ORTHO05D003970 3.2e-106 389.4 254 78.7
Actinidia15626 Actinidia chinensis HOM05D003420 ORTHO05D003970 5.5e-106 388.7 277 73.6
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 7.1e-106 388.3 275 71.3
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 7.1e-106 388.3 278 71.9
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 1.2e-105 387.5 313 65.8
Nn8g40471 Nelumbo nucifera HOM05D003420 ORTHO05D003970 4.6e-105 385.6 280 72.1
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 4.6e-105 385.6 294 70.1
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 1.8e-104 383.6 292 69.9
Haze_17875 Corylus avellana HOM05D003420 ORTHO05D003970 5.1e-104 382.1 234 82.1
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 1.5e-103 380.6 276 71.0
Zm00001eb254950 Zea mays HOM05D003420 ORTHO05D003970 1.5e-103 380.6 276 71.4
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 5.7e-103 378.6 276 70.7
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 7.4e-103 378.3 276 70.3
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 7.4e-103 378.3 278 69.1
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 1.1e-101 374.4 276 71.4
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 2.4e-101 373.2 274 70.4
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 3.1e-101 372.9 278 69.8
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 6.9e-101 371.7 278 69.4
TWI32G0245 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 1.5e-100 370.5 248 76.2
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 4.5e-100 369.0 262 72.9
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 4.5e-100 369.0 262 72.9
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 4.5e-100 369.0 260 72.7
Atru.chr13.1960 Acer truncatum HOM05D003420 ORTHO05D003970 6.5e-99 365.2 276 68.5
Zm00001eb194380 Zea mays HOM05D003420 ORTHO05D003970 5.5e-98 362.1 278 67.3
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 7.2e-98 361.7 348 58.3
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 7.2e-98 361.7 348 58.3
QL02p034918 Quercus lobata HOM05D003420 ORTHO05D003970 1.9e-95 353.6 363 55.6
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 3.7e-94 349.4 279 62.7
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 6.3e-94 348.6 278 68.7
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 2.4e-93 346.7 270 66.7
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 6.9e-93 345.1 257 72.8
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 1.5e-92 344.0 277 62.1
QL05p025142 Quercus lobata HOM05D003420 ORTHO05D003970 4.2e-90 335.9 207 79.7
Mapoly0001s0359 Marchantia polymorpha HOM05D003420 ORTHO05D003970 6.1e-89 332.0 260 63.8
HanXRQChr01g0002061 Helianthus annuus HOM05D003420 ORTHO05D003970 1.4e-88 330.9 256 67.6
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 1.7e-86 323.9 276 60.9
BcaB03g15619 Brassica carinata HOM05D003420 ORTHO05D003970 6.3e-86 322.0 204 81.9
DCAR_009600 Daucus carota HOM05D003420 ORTHO05D003970 3.1e-85 319.7 214 74.8
SMO298G0019 Selaginella moellendorffii HOM05D003420 ORTHO05D003970 1.3e-83 314.3 252 61.5
MBI02_g35948_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.2e-81 307.8 269 60.6
Psat4g195800 Pisum sativum HOM05D003420 ORTHO05D003970 1.6e-81 307.4 252 61.5
Cpa.g.sc66.125 Carica papaya HOM05D003420 ORTHO05D003970 1.4e-80 304.3 169 89.9
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 1.8e-80 303.9 287 61.0
unitig_46.g18008 Utricularia gibba HOM05D003420 ORTHO05D003970 3.3e-79 299.7 255 62.0
Migut.C00173 Erythranthe guttata HOM05D003420 ORTHO05D003970 4.4e-79 299.3 216 70.4
AagrBONN_evm.TU.Sc2ySwM_228.2748 Anthoceros agrestis HOM05D003420 ORTHO05D003970 5.9e-76 288.9 247 59.1
Haze_13393 Corylus avellana HOM05D003420 ORTHO05D003970 7.7e-76 288.5 191 77.5
Pp3c8_3920 Physcomitrium patens HOM05D003420 ORTHO05D003970 4.2e-74 282.7 243 58.4
AagrBONN_evm.TU.Sc2ySwM_117.1498 Anthoceros agrestis HOM05D003420 ORTHO05D003970 3.7e-70 269.6 247 54.3
CDE06G0862 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 3.8e-67 259.6 201 67.2
Ca_19958_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 6.8e-64 248.8 167 77.2
Ciclev10000395m.g Citrus clementina HOM05D003420 ORTHO05D003970 6.8e-64 248.8 180 67.8
BolC6t38648H Brassica oleracea HOM05D003420 ORTHO05D003970 1.6e-60 237.7 149 81.2
CBR_g30506 Chara braunii HOM05D003420 ORTHO05D003970 1.4e-56 224.6 243 47.7
COL.COLO4_12104 Corchorus olitorius HOM05D003420 ORTHO05D003970 1.4e-48 198.0 278 46.0
SEGI_21874 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 2.6e-47 193.7 113 80.5
CDE04G0884 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 5.7e-47 192.6 161 64.0
CDE04G2480 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 9.8e-39 165.2 124 68.5
Glyma.03G026300 Glycine max HOM05D003420 ORTHO05D003970 1.6e-28 131.3 68 89.7
SEGI_07888 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 6.6e-27 125.9 123 54.5
vmacro03706 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 4.3e-26 123.2 173 43.4
SHI09126 Sapria himalayana HOM05D003420 ORTHO05D003970 8.4e-22 109.0 80 63.8
Cre17.g744847 Chlamydomonas reinhardtii HOM05D003420 ORTHO05D003970 3.5e-20 103.6 204 34.3
Cpa.g.sc66.124 Carica papaya HOM05D003420 ORTHO05D003970 7.8e-20 102.4 84 64.3
ATR0824G022 Amborella trichopoda HOM05D003420 ORTHO05D003970 3.6e-17 93.6 82 57.3
MCO11G044 Micromonas commoda HOM05D003420 ORTHO05D003970 1.1e-16 92.0 190 28.4
QL05p025121 Quercus lobata HOM05D003420 ORTHO05D003970 4.6e-12 76.6 43 83.7
CDE06G1802 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 3.0e-11 73.9 71 57.7


User provided reference genes

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