Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027511 Chenopodium quinoa HOM05D004824 ORTHO05D003903 3.0e-95 353.6 608 100.0
AUR62033969 Chenopodium quinoa HOM05D004824 ORTHO05D003903 8.3e-61 239.2 293 91.1
Ah.10g031450 Amaranthus hybridus HOM05D004824 ORTHO05D003903 1.1e-28 132.5 227 73.6
EL10Ac8g19216 Beta vulgaris HOM05D004824 ORTHO05D003903 4.6e-27 127.1 220 71.8
AUR62033164 Chenopodium quinoa HOM05D004824 ORTHO05D003903 3.9e-26 124.0 299 72.9
CSS0000296 Camellia sinensis var. sinensis HOM05D004824 ORTHO05D003903 2.5e-17 94.7 88 55.7
Actinidia04364 Actinidia chinensis HOM05D004824 ORTHO05D003903 3.3e-17 94.4 88 55.7
AUR62008612 Chenopodium quinoa HOM05D004824 ORTHO05D003903 5.6e-17 93.6 299 70.2
Dinv16084 Davidia involucrata HOM05D004824 ORTHO05D003903 5.6e-17 93.6 88 55.7
CSS0029730 Camellia sinensis var. sinensis HOM05D004824 ORTHO05D003903 1.3e-16 92.4 88 54.5
vmacro09539 Vaccinium macrocarpon HOM05D004824 ORTHO05D003903 6.2e-16 90.1 89 50.6
CAN.G964.21 Capsicum annuum HOM05D004824 ORTHO05D003903 1.1e-15 89.4 235 63.0
Nitab4.5_0008978g0030 Nicotiana tabacum HOM05D004824 ORTHO05D003903 1.8e-15 88.6 236 41.9
vmacro04677 Vaccinium macrocarpon HOM05D004824 ORTHO05D003903 1.8e-15 88.6 88 52.3
Nitab4.5_0000391g0190 Nicotiana tabacum HOM05D004824 ORTHO05D003903 5.3e-15 87.0 232 62.1
CAN.G1642.5 Capsicum annuum HOM05D004824 ORTHO05D003903 5.8e-14 83.6 235 61.7
Cc02_g09320 Coffea canephora HOM05D004824 ORTHO05D003903 1.0e-13 82.8 84 48.8
Hma1.2p1_0098F.1_g048160 Hydrangea macrophylla HOM05D004824 ORTHO05D003903 1.0e-13 82.8 86 50.0
MSTRG.2666 Avicennia marina HOM05D004824 ORTHO05D003903 1.1e-12 79.3 87 44.8
Rhsim04G0218400 Rhododendron simsii HOM05D004020 ORTHO05D004735 1.4e-12 79.0 86 51.2
Sc12g0010940 Simmondsia chinensis HOM05D004824 ORTHO05D003903 4.2e-12 77.4 66 56.1
Sopen05g007720 Solanum pennellii HOM05D004824 ORTHO05D003903 4.2e-12 77.4 88 48.9
Lsat_1_v5_gn_8_33440 Lactuca sativa HOM05D004824 ORTHO05D003903 1.2e-11 75.9 89 43.8
TAR623G1477 Trochodendron aralioides HOM05D004824 ORTHO05D003903 1.2e-11 75.9 77 49.4
MD10G1219600 Malus domestica HOM05D004824 ORTHO05D003903 1.6e-11 75.5 76 50.0
TWI63G0852 Tripterygium wilfordii HOM05D004824 ORTHO05D003903 2.7e-11 74.7 64 56.2
PGSC0003DMG400028391 Solanum tuberosum HOM05D004824 ORTHO05D003903 4.6e-11 73.9 82 48.8
Solyc05g012920.3 Solanum lycopersicum HOM05D004824 ORTHO05D003903 6.1e-11 73.6 87 47.1
Haze_18457 Corylus avellana HOM05D004824 ORTHO05D003903 1.3e-10 72.4 69 53.6
ClCG06G012000 Citrullus lanatus HOM05D004824 ORTHO05D003903 1.8e-10 72.0 89 47.2
SalBow7G1004 Salvia bowleyana HOM05D004824 ORTHO05D003903 1.8e-10 72.0 80 40.0
SHI24599 Sapria himalayana HOM05D008459 ORTHO05D003903 1.8e-10 72.0 227 31.3
HanXRQChr12g0366191 Helianthus annuus HOM05D004824 ORTHO05D003903 2.3e-10 71.6 89 46.1
Hund12341 Selenicereus undatus HOM05D004824 ORTHO05D003903 2.3e-10 71.6 58 60.3
ECA233G4957 Erigeron canadensis HOM05D004824 ORTHO05D003903 5.1e-10 70.5 89 44.9
Prupe.4G124300 Prunus persica HOM05D004824 ORTHO05D003903 6.7e-10 70.1 76 48.7
RcHm_v2.0_Chr5g0022931 Rosa chinensis HOM05D004824 ORTHO05D003903 6.7e-10 70.1 227 59.0
arahy.Tifrunner.gnm1.ann1.XC7PBP Arachis hypogaea HOM05D004824 ORTHO05D003903 8.7e-10 69.7 89 43.8
TWI79G0695 Tripterygium wilfordii HOM05D004824 ORTHO05D003903 8.7e-10 69.7 69 53.6
arahy.Tifrunner.gnm1.ann1.SR7DDI Arachis hypogaea HOM05D004824 ORTHO05D003903 1.1e-09 69.3 89 43.8
Manes.10G060400 Manihot esculenta HOM05D004824 ORTHO05D003903 1.9e-09 68.6 75 45.3
FvH4_3g13690 Fragaria vesca HOM05D004824 ORTHO05D003903 2.5e-09 68.2 227 58.6
FAN25G3679 Fragaria x ananassa HOM05D004824 ORTHO05D003903 2.5e-09 68.2 227 58.1
CiPaw.15G110500 Carya illinoinensis HOM05D004824 ORTHO05D003903 3.3e-09 67.8 69 50.7
Manes.02G087700 Manihot esculenta HOM05D004824 ORTHO05D003903 4.3e-09 67.4 92 40.2
Phvul.008G038900 Phaseolus vulgaris HOM05D004824 ORTHO05D003903 4.3e-09 67.4 85 42.4
QL05p080937 Quercus lobata HOM05D004824 ORTHO05D003903 4.3e-09 67.4 78 47.4
FAN11G3130 Fragaria x ananassa HOM05D004824 ORTHO05D003903 7.4e-09 66.6 227 56.8
FAN16G0917 Fragaria x ananassa HOM05D001160 ORTHO05D001092 7.4e-09 66.6 227 56.8
Peaxi162Scf00222g00211 Petunia axillaris HOM05D004824 ORTHO05D003903 7.4e-09 66.6 85 44.7
Potri.004G066600 Populus trichocarpa HOM05D004824 ORTHO05D003903 7.4e-09 66.6 76 46.1
Sabra04G0044400 Salix brachista HOM05D004824 ORTHO05D003903 9.7e-09 66.2 76 46.1
Sed0004559 Sechium edule HOM05D004824 ORTHO05D003903 9.7e-09 66.2 72 47.2
MELO3C010547.2 Cucumis melo HOM05D004824 ORTHO05D003903 1.3e-08 65.9 70 50.0
Duzib147G0012 Durio zibethinus HOM05D004824 ORTHO05D003903 2.2e-08 65.1 74 45.9
CANSAT21G1575 Cannabis sativa HOM05D004824 ORTHO05D003903 3.7e-08 64.3 68 47.1
CsaV3_1G028470 Cucumis sativus L. HOM05D004824 ORTHO05D003903 3.7e-08 64.3 77 46.8
Ciclev10014253m.g Citrus clementina HOM05D004824 ORTHO05D003903 1.4e-07 62.4 77 44.2
Lalb_Chr10g0093361 Lupinus albus HOM05D004824 ORTHO05D003903 4.1e-07 60.8 87 41.4
HanXRQChr13g0425261 Helianthus annuus HOM05D004824 ORTHO05D003903 5.3e-07 60.5 92 42.4
VMungo0251G2839 Vigna mungo HOM05D004824 ORTHO05D003903 5.3e-07 60.5 89 40.4
Glyma.05G060900 Glycine max HOM05D004824 ORTHO05D003903 1.5e-06 58.9 63 49.2
Thhalv10001906m.g Eutrema salsugineum HOM05D004824 ORTHO05D003903 2.0e-06 58.5 67 40.3
HanXRQChr17g0540701 Helianthus annuus HOM05D004824 ORTHO05D003903 2.6e-06 58.2 91 42.9
ECA246G0928 Erigeron canadensis HOM05D004824 ORTHO05D003903 4.5e-06 57.4 92 38.0
Migut.D01549 Erythranthe guttata HOM05D004824 ORTHO05D003903 4.5e-06 57.4 64 42.2
MD05G1241200 Malus domestica HOM05D004824 ORTHO05D003903 4.5e-06 57.4 49 55.1
Lj1g0015996 Lotus japonicus HOM05D000005 ORTHO05D000012 5.9e-06 57.0 73 42.5
Cpa.g.sc743.5 Carica papaya HOM05D004824 ORTHO05D003903 7.7e-06 56.6 75 41.3
Oeu060442.1 Olea europaea HOM05D004824 ORTHO05D003903 7.7e-06 56.6 49 51.0


User provided reference genes

Program Settings