Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027498 Chenopodium quinoa HOM05D006771 ORTHO05D008296 0.0e+00 1368.2 750 100.0
AUR62033982 Chenopodium quinoa HOM05D006771 ORTHO05D008296 1.0e-249 867.1 711 71.0
EL10Ac8g19225 Beta vulgaris HOM05D006771 ORTHO05D008296 5.9e-157 558.9 760 49.6
Ah.14g085210 Amaranthus hybridus HOM05D006771 ORTHO05D008296 2.2e-87 327.8 687 38.9
Hund06680 Selenicereus undatus HOM05D006771 ORTHO05D008296 9.9e-56 222.6 360 42.8
Sc18g0002030 Simmondsia chinensis HOM05D006771 ORTHO05D008296 6.1e-37 160.2 146 61.6
Manes.03G033100 Manihot esculenta HOM05D006771 ORTHO05D008296 6.5e-31 140.2 242 37.6
Dinv36762 Davidia involucrata HOM05D006771 ORTHO05D008296 8.5e-31 139.8 409 30.8
TAR624G0646 Trochodendron aralioides HOM05D006771 ORTHO05D008296 3.2e-30 137.9 146 50.0
MD15G1206500 Malus domestica HOM05D006771 ORTHO05D008296 5.5e-30 137.1 274 38.7
Duzib187G1830 Durio zibethinus HOM05D006771 ORTHO05D008296 2.1e-29 135.2 253 37.2
Duzib168G0935 Durio zibethinus HOM05D006771 ORTHO05D008296 4.7e-29 134.0 265 36.2
Ciclev10010605m.g Citrus clementina HOM05D006771 ORTHO05D008296 6.1e-29 133.7 249 40.2
Thecc.09G090100 Theobroma cacao HOM05D006771 ORTHO05D008296 1.8e-28 132.1 255 36.9
GSVIVG01015209001 Vitis vinifera HOM05D006771 ORTHO05D008296 2.3e-28 131.7 291 36.8
CiPaw.03G216900 Carya illinoinensis HOM05D006771 ORTHO05D008296 3.9e-28 131.0 218 41.7
CANSAT56G0603 Cannabis sativa HOM05D006771 ORTHO05D008296 6.7e-28 130.2 323 34.7
RcHm_v2.0_Chr2g0093251 Rosa chinensis HOM05D006771 ORTHO05D008296 6.7e-28 130.2 260 38.1
Atru.chr7.1582 Acer truncatum HOM05D006771 ORTHO05D008296 2.6e-27 128.3 343 33.5
QL02p062800 Quercus lobata HOM05D006771 ORTHO05D008296 2.6e-27 128.3 359 31.5
ECA234G3532 Erigeron canadensis HOM05D006771 ORTHO05D008296 7.4e-27 126.7 207 39.1
Potri.006G151100 Populus trichocarpa HOM05D006771 ORTHO05D008296 1.3e-26 125.9 307 32.6
Cfa003093 Carpinus fangiana HOM05D006771 ORTHO05D008296 2.2e-26 125.2 300 35.3
vmacro06287 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.7e-26 124.4 147 46.9
vmacro23430 Vaccinium macrocarpon HOM05D006771 ORTHO05D008296 3.7e-26 124.4 147 46.9
COL.COLO4_18206 Corchorus olitorius HOM05D006771 ORTHO05D008296 6.3e-26 123.6 146 45.2
Actinidia29883 Actinidia chinensis HOM05D006771 ORTHO05D008296 1.4e-25 122.5 165 43.6
SalBow1G1031 Salvia bowleyana HOM05D006771 ORTHO05D008296 9.1e-25 119.8 121 45.5
HanXRQChr10g0319291 Helianthus annuus HOM05D006771 ORTHO05D008296 1.2e-24 119.4 125 48.0
Prupe.7G210300 Prunus persica HOM05D006771 ORTHO05D008296 1.2e-24 119.4 359 32.9
Sed0013958 Sechium edule HOM05D006771 ORTHO05D008296 1.2e-24 119.4 133 48.9
Nn8g38880 Nelumbo nucifera HOM05D006771 ORTHO05D008296 1.5e-24 119.0 123 50.4
Nitab4.5_0005033g0010 Nicotiana tabacum HOM05D006771 ORTHO05D008296 2.0e-24 118.6 185 40.0
Oeu042645.4 Olea europaea HOM05D006771 ORTHO05D008296 2.0e-24 118.6 122 49.2
Sabra06G0119600 Salix brachista HOM05D006771 ORTHO05D008296 2.0e-24 118.6 122 50.0
Gohir.A07G010700 Gossypium hirsutum HOM05D006771 ORTHO05D008296 4.5e-24 117.5 194 40.2
DCAR_024688 Daucus carota HOM05D006771 ORTHO05D008296 5.9e-24 117.1 372 30.1
Aqoxy7G01223_Aqoxy7G01224 Aquilegia oxysepala HOM05D006771 ORTHO05D008296 7.7e-24 116.7 381 29.1
Gohir.A06G072300 Gossypium hirsutum HOM05D006771 ORTHO05D008296 7.7e-24 116.7 412 30.6
ClCG11G001770 Citrullus lanatus HOM05D006771 ORTHO05D008296 1.3e-23 115.9 200 38.5
TWI63G0991 Tripterygium wilfordii HOM05D006771 ORTHO05D008296 1.3e-23 115.9 372 30.9
CAN.G235.1 Capsicum annuum HOM05D006771 ORTHO05D008296 2.2e-23 115.2 122 50.8
CDE06G0351 Ceratophyllum demersum HOM05D006771 ORTHO05D008296 2.2e-23 115.2 135 46.7
HanXRQChr12g0354831 Helianthus annuus HOM05D006771 ORTHO05D008296 2.9e-23 114.8 300 31.3
DCAR_031968 Daucus carota HOM05D006771 ORTHO05D008296 5.0e-23 114.0 444 27.5
FvH4_1g07370 Fragaria vesca HOM05D006771 ORTHO05D008296 1.1e-22 112.8 386 30.1
Gohir.D06G070900 Gossypium hirsutum HOM05D006771 ORTHO05D008296 1.4e-22 112.5 437 29.3
Solyc07g039190.4 Solanum lycopersicum HOM05D006771 ORTHO05D008296 1.4e-22 112.5 122 49.2
Gohir.D07G011000 Gossypium hirsutum HOM05D006771 ORTHO05D008296 3.2e-22 111.3 246 35.0
Gorai.001G011400 Gossypium raimondii HOM05D006771 ORTHO05D008296 3.2e-22 111.3 246 35.0
PGSC0003DMG401013152 Solanum tuberosum HOM05D006771 ORTHO05D008296 3.2e-22 111.3 122 50.0
Cc06_g11360 Coffea canephora HOM05D006771 ORTHO05D008296 1.2e-21 109.4 377 30.8
CsaV3_2G001480 Cucumis sativus L. HOM05D006771 ORTHO05D008296 1.2e-21 109.4 348 29.6
FAN26G2123 Fragaria x ananassa HOM05D006771 ORTHO05D008296 1.2e-21 109.4 384 31.0
arahy.Tifrunner.gnm1.ann1.LUTY24 Arachis hypogaea HOM05D006771 ORTHO05D008296 1.6e-21 109.0 152 43.4
arahy.Tifrunner.gnm1.ann1.H0G9IY Arachis hypogaea HOM05D006771 ORTHO05D008296 3.6e-21 107.8 238 34.9
Glyma.09G062700 Glycine max HOM05D006771 ORTHO05D008296 4.7e-21 107.5 239 36.8
Nitab4.5_0005634g0020 Nicotiana tabacum HOM05D006771 ORTHO05D008296 1.0e-20 106.3 181 37.0
Eucgr.C03649 Eucalyptus grandis HOM05D006771 ORTHO05D008296 1.4e-20 105.9 346 30.3
PSO832G0455 Papaver somniferum HOM05D006771 ORTHO05D008296 1.4e-20 105.9 179 39.7
Ca_02153_v3 Cicer arietinum L. HOM05D006771 ORTHO05D008296 1.8e-20 105.5 272 32.0
Gorai.010G082600 Gossypium raimondii HOM05D006771 ORTHO05D008296 2.3e-20 105.1 438 27.9
FAN26G3254 Fragaria x ananassa HOM05D006771 ORTHO05D008296 3.0e-20 104.8 387 31.0
Glyma.15G169200 Glycine max HOM05D006771 ORTHO05D008296 3.9e-20 104.4 242 34.3
Medtr2g038710 Medicago truncatula HOM05D006771 ORTHO05D008296 3.9e-20 104.4 399 28.8
Lalb_Chr08g0232051 Lupinus albus HOM05D006771 ORTHO05D008296 5.2e-20 104.0 182 40.1
PSO063G0725 Papaver somniferum HOM05D006771 ORTHO05D008296 1.1e-19 102.8 161 42.9
Eucgr.C03893 Eucalyptus grandis HOM05D006771 ORTHO05D008296 2.6e-19 101.7 445 28.8
Peaxi162Scf01121g00112 Petunia axillaris HOM05D006771 ORTHO05D008296 2.6e-19 101.7 127 42.5
FAN28G0978 Fragaria x ananassa HOM05D006771 ORTHO05D008296 5.7e-19 100.5 413 28.8
FAN23G2606 Fragaria x ananassa HOM05D006771 ORTHO05D008296 7.4e-19 100.1 390 30.3
TPR.G35458 Trifolium pratense HOM05D006771 ORTHO05D008296 7.4e-19 100.1 302 30.8
Lsat_1_v5_gn_5_142241 Lactuca sativa HOM05D006771 ORTHO05D008296 3.7e-18 97.8 482 26.8
FAN19G1581 Fragaria x ananassa HOM05D006771 ORTHO05D008296 8.2e-18 96.7 384 28.4
AT5G56850 Arabidopsis thaliana HOM05D006771 ORTHO05D008296 5.3e-17 94.0 150 37.3
MBI04_g34126_MAGBIO Magnolia biondii HOM05D006771 ORTHO05D008296 7.0e-17 93.6 217 33.6
PGR102G2735 Punica granatum HOM05D006771 ORTHO05D008296 7.0e-17 93.6 285 27.7
SEGI_22775 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 1.6e-16 92.4 133 40.6
Psat1g141720 Pisum sativum HOM05D006771 ORTHO05D008296 2.6e-16 91.7 392 28.1
Thhalv10013398m.g Eutrema salsugineum HOM05D006771 ORTHO05D008296 4.5e-16 90.9 163 35.6
Phvul.009G232800 Phaseolus vulgaris HOM05D006771 ORTHO05D008296 4.5e-16 90.9 463 24.8
AL8G32700 Arabidopsis lyrata HOM05D006771 ORTHO05D008296 7.7e-16 90.1 146 37.0
unitig_699.g19301 Utricularia gibba HOM05D006771 ORTHO05D008296 1.1e-14 86.3 126 38.1
SGA_v2.0_scaffold21G09363 Striga asiatica HOM05D006771 ORTHO05D008296 5.5e-14 84.0 154 35.7
Sp6g18570 Schrenkiella parvula HOM05D006771 ORTHO05D008296 7.2e-14 83.6 276 27.2
Pp3c9_2800 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.2e-13 82.8 142 37.3
Pp3c9_2809 Physcomitrium patens HOM05D006771 ORTHO05D008296 1.2e-13 82.8 142 37.3
Lj6g0004334 Lotus japonicus HOM05D006771 ORTHO05D008296 2.7e-13 81.6 352 28.7
Migut.L01489 Erythranthe guttata HOM05D006771 ORTHO05D008296 4.7e-13 80.9 785 23.6
A03p13130 Brassica napus HOM05D006771 ORTHO05D008296 1.8e-12 79.0 444 24.8
Pp3c15_7000 Physcomitrium patens HOM05D006771 ORTHO05D008296 3.0e-12 78.2 145 33.1
AagrBONN_evm.TU.Sc2ySwM_344.5001 Anthoceros agrestis HOM05D062329 ORTHO05D008296 5.2e-12 77.4 125 35.2
C03p15350 Brassica napus HOM05D006771 ORTHO05D008296 5.2e-12 77.4 440 26.4
ATR0716G111 Amborella trichopoda HOM05D006771 ORTHO05D008296 8.8e-12 76.6 83 44.6
BolC3t13977H Brassica oleracea HOM05D006771 ORTHO05D008296 8.8e-12 76.6 439 25.5
Mapoly0003s0143 Marchantia polymorpha HOM05D006771 ORTHO05D008296 4.4e-11 74.3 127 34.6
BraA03t10624Z Brassica rapa HOM05D006771 ORTHO05D008296 1.7e-10 72.4 351 25.6
Rhsim03G0232900 Rhododendron simsii HOM05D006771 ORTHO05D008296 3.7e-10 71.2 225 29.3
BcaB01g04422 Brassica carinata HOM05D006771 ORTHO05D008296 6.3e-10 70.5 469 22.8
Carub.0008s1731 Capsella rubella HOM05D006771 ORTHO05D008296 2.4e-09 68.6 399 22.6
Zm00001eb345250 Zea mays HOM05D006771 ORTHO05D008296 2.4e-09 68.6 214 28.5
Sc18g0002050 Simmondsia chinensis HOM05D006771 ORTHO05D008296 9.1e-09 66.6 189 30.2
VMungo1309G1333 Vigna mungo HOM05D006771 ORTHO05D008296 2.2e-07 62.0 288 27.1
CSS0032707 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 3.8e-07 61.2 171 28.1
Os05g0232200 Oryza sativa ssp. japonica HOM05D006771 ORTHO05D008296 6.5e-07 60.5 189 25.9
CSS0016785 Camellia sinensis var. sinensis HOM05D006771 ORTHO05D008296 8.5e-07 60.1 163 31.3
SEGI_24756 Sequoiadendron giganteum HOM05D006771 ORTHO05D008296 2.5e-06 58.5 104 34.6
Haze_25906 Corylus avellana HOM05D006771 ORTHO05D008296 3.2e-06 58.2 64 48.4
MELO3C004623.2 Cucumis melo HOM05D006771 ORTHO05D008296 7.2e-06 57.0 310 25.5


User provided reference genes

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