Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027422 Chenopodium quinoa HOM05D005890 ORTHO05D006717 1.7e-206 722.6 424 100.0
AUR62031274 Chenopodium quinoa HOM05D005890 ORTHO05D006717 6.9e-139 498.0 425 68.5
EL10Ac8g19296 Beta vulgaris HOM05D005890 ORTHO05D006717 2.7e-114 416.4 451 64.3
Ah.14g085350 Amaranthus hybridus HOM05D005890 ORTHO05D006717 4.1e-83 312.8 434 48.2
Hund24378 Selenicereus undatus HOM05D005890 ORTHO05D006717 4.4e-61 239.6 480 43.1
Cfa013466 Carpinus fangiana HOM05D005890 ORTHO05D006717 1.3e-57 228.0 480 39.2
ClCG06G013720 Citrullus lanatus HOM05D005890 ORTHO05D006717 4.6e-50 203.0 443 37.2
MELO3C006422.2 Cucumis melo HOM05D005890 ORTHO05D006717 7.9e-50 202.2 432 38.2
GSVIVG01029286001 Vitis vinifera HOM05D005890 ORTHO05D006717 1.0e-49 201.8 467 34.3
CANSAT01G0113 Cannabis sativa HOM05D005890 ORTHO05D006717 1.8e-49 201.1 424 42.0
Medtr4g127160 Medicago truncatula HOM05D005890 ORTHO05D006717 8.7e-49 198.7 421 42.8
Lj4g0027857 Lotus japonicus HOM05D005890 ORTHO05D006717 1.3e-47 194.9 410 40.2
QL07p048247 Quercus lobata HOM05D005890 ORTHO05D006717 1.3e-47 194.9 494 32.6
CsaV3_3G012070 Cucumis sativus L. HOM05D005890 ORTHO05D006717 2.8e-47 193.7 435 36.6
Hma1.2p1_0235F.1_g098760 Hydrangea macrophylla HOM05D005890 ORTHO05D006717 8.1e-47 192.2 478 33.7
FAN17G2561 Fragaria x ananassa HOM05D005890 ORTHO05D006717 2.4e-46 190.7 417 37.9
Nitab4.5_0000028g0410 Nicotiana tabacum HOM05D005890 ORTHO05D006717 2.4e-46 190.7 422 38.4
FAN07G1770 Fragaria x ananassa HOM05D005890 ORTHO05D006717 4.0e-46 189.9 416 37.0
MD16G1246300 Malus domestica HOM05D005890 ORTHO05D006717 4.0e-46 189.9 451 36.1
Eucgr.C02214 Eucalyptus grandis HOM05D005890 ORTHO05D006717 9.0e-46 188.7 468 35.5
PGSC0003DMG400019897 Solanum tuberosum HOM05D005890 ORTHO05D006717 1.2e-45 188.3 419 39.6
FAN12G2329 Fragaria x ananassa HOM05D005890 ORTHO05D006717 1.5e-45 188.0 417 37.2
MSTRG.26556 Avicennia marina HOM05D005890 ORTHO05D006717 2.6e-45 187.2 485 34.4
arahy.Tifrunner.gnm1.ann1.CB00ZF Arachis hypogaea HOM05D005890 ORTHO05D006717 3.4e-45 186.8 423 38.8
Lalb_Chr13g0299851 Lupinus albus HOM05D005890 ORTHO05D006717 4.5e-45 186.4 414 39.1
Sed0014693 Sechium edule HOM05D005890 ORTHO05D006717 5.8e-45 186.0 441 35.6
Peaxi162Scf00046g00417 Petunia axillaris HOM05D005890 ORTHO05D006717 1.3e-44 184.9 420 41.0
Phvul.003G140452 Phaseolus vulgaris HOM05D005890 ORTHO05D006717 1.7e-44 184.5 426 40.1
VMungo1215G0729 Vigna mungo HOM05D005890 ORTHO05D006717 2.2e-44 184.1 419 37.9
Thecc.09G191500 Theobroma cacao HOM05D005890 ORTHO05D006717 3.8e-44 183.3 484 34.5
Glyma.13G101600 Glycine max HOM05D005890 ORTHO05D006717 6.4e-44 182.6 417 40.5
Glyma.17G058000 Glycine max HOM05D005890 ORTHO05D006717 6.4e-44 182.6 374 37.4
Gorai.012G008900 Gossypium raimondii HOM05D005890 ORTHO05D006717 6.4e-44 182.6 434 35.9
Sopen07g004220 Solanum pennellii HOM05D005890 ORTHO05D006717 1.1e-43 181.8 425 40.7
Nitab4.5_0004916g0020 Nicotiana tabacum HOM05D005890 ORTHO05D006717 3.2e-43 180.3 418 40.0
Cc03_g15250 Coffea canephora HOM05D005890 ORTHO05D006717 4.2e-43 179.9 495 35.8
Gohir.A05G408300 Gossypium hirsutum HOM05D005890 ORTHO05D006717 5.5e-43 179.5 436 36.7
CiPaw.07G198700 Carya illinoinensis HOM05D005890 ORTHO05D006717 7.1e-43 179.1 417 37.2
Solyc07g008330.3 Solanum lycopersicum HOM05D005890 ORTHO05D006717 1.2e-42 178.3 414 40.6
THA.LOC104813501 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 1.6e-42 177.9 420 41.9
arahy.Tifrunner.gnm1.ann1.V3N0NP Arachis hypogaea HOM05D005890 ORTHO05D006717 2.1e-42 177.6 423 38.5
CAN.G403.1 Capsicum annuum HOM05D005890 ORTHO05D006717 2.7e-42 177.2 385 41.0
Ciclev10008727m.g Citrus clementina HOM05D005890 ORTHO05D006717 2.7e-42 177.2 172 58.1
Potri.006G073100 Populus trichocarpa HOM05D005890 ORTHO05D006717 2.7e-42 177.2 478 36.2
THA.LOC104817770 Tarenaya hassleriana HOM05D005890 ORTHO05D006717 2.7e-42 177.2 419 44.6
DCAR_018014 Daucus carota HOM05D005890 ORTHO05D006717 4.6e-42 176.4 428 37.6
Rhsim01G0114500 Rhododendron simsii HOM05D005890 ORTHO05D006717 4.6e-42 176.4 521 31.3
Dinv41195 Davidia involucrata HOM05D005890 ORTHO05D006717 7.9e-42 175.6 597 31.0
Migut.L01872 Erythranthe guttata HOM05D005890 ORTHO05D006717 1.3e-41 174.9 418 35.6
RcHm_v2.0_Chr4g0398981 Rosa chinensis HOM05D005890 ORTHO05D006717 1.3e-41 174.9 480 33.3
Prupe.1G073000 Prunus persica HOM05D005890 ORTHO05D006717 1.8e-41 174.5 440 40.9
HanXRQChr03g0065401 Helianthus annuus HOM05D005890 ORTHO05D006717 3.0e-41 173.7 421 36.8
unitig_8.g3553 Utricularia gibba HOM05D005890 ORTHO05D006717 3.0e-41 173.7 426 32.6
Dinv25461 Davidia involucrata HOM05D005890 ORTHO05D006717 5.1e-41 172.9 547 30.9
Sp6g18850 Schrenkiella parvula HOM05D005890 ORTHO05D006717 8.7e-41 172.2 420 38.3
Duzib170G1164 Durio zibethinus HOM05D005890 ORTHO05D006717 1.5e-40 171.4 524 32.4
PGR044G2166 Punica granatum HOM05D005890 ORTHO05D006717 2.5e-40 170.6 463 38.0
Potri.018G140200 Populus trichocarpa HOM05D005890 ORTHO05D006717 3.3e-40 170.2 477 33.1
SGA_v2.0_scaffold41G15805 Striga asiatica HOM05D005890 ORTHO05D006717 5.6e-40 169.5 481 33.3
HanXRQChr10g0308981 Helianthus annuus HOM05D005890 ORTHO05D006717 9.6e-40 168.7 376 42.3
Sabra06G0054500 Salix brachista HOM05D005890 ORTHO05D006717 9.6e-40 168.7 481 36.2
TPR.G5393 Trifolium pratense HOM05D005890 ORTHO05D006717 3.7e-39 166.8 423 42.3
Actinidia02494 Actinidia chinensis HOM05D005890 ORTHO05D006717 4.8e-39 166.4 510 33.9
Ca_21262_v3 Cicer arietinum L. HOM05D005890 ORTHO05D006717 6.2e-39 166.0 407 36.4
Oeu063100.1 Olea europaea HOM05D005890 ORTHO05D006717 6.2e-39 166.0 154 61.0
Aqoxy7G02888 Aquilegia oxysepala HOM05D005890 ORTHO05D006717 5.3e-38 162.9 222 46.8
CDE02G0471 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 1.2e-37 161.8 453 32.5
Thhalv10013871m.g Eutrema salsugineum HOM05D005890 ORTHO05D006717 2.0e-37 161.0 414 35.0
CSS0049336 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 2.6e-37 160.6 220 48.6
ATR1098G092 Amborella trichopoda HOM05D005890 ORTHO05D006717 3.4e-37 160.2 150 60.7
ECA240G0208 Erigeron canadensis HOM05D005890 ORTHO05D006717 3.4e-37 160.2 118 72.0
Atru.chr7.926 Acer truncatum HOM05D005890 ORTHO05D006717 1.3e-36 158.3 112 73.2
Nn8g40670 Nelumbo nucifera HOM05D005890 ORTHO05D006717 1.3e-36 158.3 212 48.1
Atru.BG.17.p Acer truncatum HOM05D005890 ORTHO05D006717 1.7e-36 157.9 111 73.0
Sed0024384 Sechium edule HOM05D005890 ORTHO05D006717 2.2e-36 157.5 398 33.9
Aa31LG3G13020 Aethionema arabicum HOM05D005890 ORTHO05D006717 3.8e-36 156.8 404 38.1
SGA_v2.0_scaffold392G50652 Striga asiatica HOM05D005890 ORTHO05D006717 8.4e-36 155.6 160 59.4
TWI34G1560 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 1.1e-35 155.2 423 35.5
TWI32G1283 Tripterygium wilfordii HOM05D005890 ORTHO05D006717 3.2e-35 153.7 486 31.7
PSO170G0082 Papaver somniferum HOM05D005890 ORTHO05D006717 7.1e-35 152.5 114 72.8
ECA234G0353 Erigeron canadensis HOM05D005890 ORTHO05D006717 9.3e-35 152.1 116 69.8
Lsat_1_v5_gn_7_55781 Lactuca sativa HOM05D005890 ORTHO05D006717 4.6e-34 149.8 451 33.9
Os12g0613500 Oryza sativa ssp. japonica HOM05D005890 ORTHO05D006717 4.6e-34 149.8 401 36.2
TAR637G0001 Trochodendron aralioides HOM05D005890 ORTHO05D006717 4.6e-34 149.8 88 85.2
Lsat_1_v5_gn_5_83860 Lactuca sativa HOM05D005890 ORTHO05D006717 6.1e-34 149.4 382 37.4
PSO063G0609 Papaver somniferum HOM05D005890 ORTHO05D006717 1.3e-33 148.3 443 40.9
Psat4g014480 Pisum sativum HOM05D005890 ORTHO05D006717 2.3e-33 147.5 146 57.5
BcaB08g36002 Brassica carinata HOM05D005890 ORTHO05D006717 5.1e-33 146.4 118 66.9
CARHR270890 Cardamine hirsuta HOM05D005890 ORTHO05D006717 8.7e-33 145.6 413 39.2
Manes.06G017800 Manihot esculenta HOM05D005890 ORTHO05D006717 8.7e-33 145.6 486 32.1
CDE05G3513 Ceratophyllum demersum HOM05D005890 ORTHO05D006717 4.3e-32 143.3 440 31.8
Zm00001eb136110 Zea mays HOM05D005890 ORTHO05D006717 5.7e-32 142.9 161 50.9
SEGI_20539 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 7.4e-32 142.5 150 56.7
BolC9t57729H Brassica oleracea HOM05D005890 ORTHO05D006717 2.2e-31 141.0 374 36.1
Cpa.g.sc115.65 Carica papaya HOM05D005890 ORTHO05D006717 2.8e-31 140.6 123 65.0
C09p48820 Brassica napus HOM05D005890 ORTHO05D006717 3.7e-31 140.2 374 36.1
BcaC04g20011 Brassica carinata HOM05D005890 ORTHO05D006717 4.8e-31 139.8 374 40.1
A02p08710 Brassica napus HOM05D005890 ORTHO05D006717 1.1e-30 138.7 400 41.2
BraA02t05941Z Brassica rapa HOM05D005890 ORTHO05D006717 1.1e-30 138.7 400 42.5
vmacro20806 Vaccinium macrocarpon HOM05D005890 ORTHO05D006717 1.1e-30 138.7 202 44.6
BcaB05g22318 Brassica carinata HOM05D005890 ORTHO05D006717 1.8e-30 137.9 398 40.7
HPP92_018699 Vanilla planifolia HOM05D005890 ORTHO05D006717 3.1e-30 137.1 133 57.9
BcaC03g14182 Brassica carinata HOM05D005890 ORTHO05D006717 3.4e-29 133.7 399 39.6
C02p14590 Brassica napus HOM05D005890 ORTHO05D006717 3.4e-29 133.7 399 39.6
BolC2t07586H Brassica oleracea HOM05D005890 ORTHO05D006717 3.4e-29 133.7 399 39.6
COL.COLO4_08570 Corchorus olitorius HOM05D005890 ORTHO05D006717 3.8e-28 130.2 555 28.6
MBI18_g10586_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 5.0e-28 129.8 120 62.5
MBI14_g15782_MAGBIO Magnolia biondii HOM05D005890 ORTHO05D006717 7.2e-27 125.9 176 47.7
Pp3c3_34440 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.4e-25 121.7 138 52.9
Pp3c3_34441 Physcomitrium patens HOM05D005890 ORTHO05D006717 1.4e-25 121.7 138 52.9
AagrBONN_evm.TU.Sc2ySwM_368.973 Anthoceros agrestis HOM05D005890 ORTHO05D006717 3.9e-25 120.2 180 44.4
Haze_22044 Corylus avellana HOM05D005890 ORTHO05D006717 1.5e-24 118.2 126 57.1
SMO337G0105 Selaginella moellendorffii HOM05D004944 ORTHO05D005989 5.7e-24 116.3 117 53.8
Mapoly0009s0141 Marchantia polymorpha HOM05D005890 ORTHO05D006717 1.7e-23 114.8 127 53.5
Zm00001eb172010 Zea mays HOM05D005890 ORTHO05D006717 5.3e-22 109.8 153 45.8
CBR_g20282 Chara braunii HOM05D000019 ORTHO05D000002 5.9e-21 106.3 73 68.5
Carub.0008s1762 Capsella rubella HOM05D005890 ORTHO05D006717 1.3e-20 105.1 92 60.9
AT5G57120 Arabidopsis thaliana HOM05D005890 ORTHO05D006717 8.5e-20 102.4 375 37.9
SEGI_22268 Sequoiadendron giganteum HOM05D005890 ORTHO05D006717 2.5e-19 100.9 62 75.8
AL8G33040 Arabidopsis lyrata HOM05D005890 ORTHO05D006717 1.0e-17 95.5 374 30.2
MD13G1240600 Malus domestica HOM05D005890 ORTHO05D006717 1.8e-17 94.7 391 29.9
FvH4_4g06950 Fragaria vesca HOM05D005890 ORTHO05D006717 2.6e-16 90.9 361 29.6
Gohir.D04G007200 Gossypium hirsutum HOM05D005890 ORTHO05D006717 1.3e-15 88.6 358 27.9
CSS0049604 Camellia sinensis var. sinensis HOM05D005890 ORTHO05D006717 7.0e-14 82.8 227 35.2
Cre01.g055400 Chlamydomonas reinhardtii HOM05D005890 ORTHO05D006717 4.5e-13 80.1 93 57.0
Sabra18G0114500 Salix brachista HOM05D005890 ORTHO05D006717 1.5e-11 75.1 425 26.1
Zm00001eb394450 Zea mays HOM05D014690 ORTHO05D006717 1.6e-10 71.6 55 61.8
CiPaw.08G031700 Carya illinoinensis HOM05D005890 ORTHO05D006717 1.8e-09 68.2 144 31.9
DCAR_029041 Daucus carota HOM05D005890 ORTHO05D006717 2.6e-08 64.3 123 43.1
MCO09G065 Micromonas commoda HOM05D005890 ORTHO05D006717 2.6e-08 64.3 86 50.0
A10p14440 Brassica napus HOM05D005890 ORTHO05D006717 1.7e-07 61.6 34 82.4
BraA10t43535Z Brassica rapa HOM05D005890 ORTHO05D006717 1.7e-07 61.6 34 82.4


User provided reference genes

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