Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027411 Chenopodium quinoa HOM05D006034 ORTHO05D007535 7.4e-101 370.5 189 100.0
AUR62031326 Chenopodium quinoa HOM05D006034 ORTHO05D007535 2.9e-81 305.4 275 64.4
TAR636G0081 Trochodendron aralioides HOM05D006034 ORTHO05D007535 2.7e-66 255.8 191 64.9
Gohir.D06G070100 Gossypium hirsutum HOM05D006034 ORTHO05D007535 2.1e-63 246.1 191 60.7
Gohir.A06G071400 Gossypium hirsutum HOM05D006034 ORTHO05D007535 3.6e-63 245.4 191 61.3
Gorai.010G081700 Gossypium raimondii HOM05D006034 ORTHO05D007535 3.6e-63 245.4 191 61.3
MSTRG.19527 Avicennia marina HOM05D006034 ORTHO05D007535 5.2e-62 241.5 191 61.3
COL.COLO4_18220 Corchorus olitorius HOM05D006034 ORTHO05D001756 5.2e-62 241.5 193 60.1
PGSC0003DMG400000341 Solanum tuberosum HOM05D006034 ORTHO05D007535 5.2e-62 241.5 191 61.3
GSVIVG01015225001 Vitis vinifera HOM05D006034 ORTHO05D007535 6.8e-62 241.1 190 61.6
Ciclev10008848m.g Citrus clementina HOM05D006034 ORTHO05D007535 2.6e-61 239.2 193 59.6
FvH4_1g22100 Fragaria vesca HOM05D006034 ORTHO05D007535 4.4e-61 238.4 193 61.1
FAN19G2130 Fragaria x ananassa HOM05D006034 ORTHO05D007535 4.4e-61 238.4 193 61.1
Potri.006G150200 Populus trichocarpa HOM05D006034 ORTHO05D007535 5.8e-61 238.0 191 60.7
Migut.J00593 Erythranthe guttata HOM05D006034 ORTHO05D007535 2.2e-60 236.1 191 61.3
RcHm_v2.0_Chr2g0093061 Rosa chinensis HOM05D006034 ORTHO05D007535 2.2e-60 236.1 193 60.1
FAN26G1667 Fragaria x ananassa HOM05D006034 ORTHO05D007535 2.9e-60 235.7 193 61.1
CAN.G1241.18 Capsicum annuum HOM05D006034 ORTHO05D007535 4.9e-60 235.0 191 62.8
FAN23G1099 Fragaria x ananassa HOM05D006034 ORTHO05D007535 6.4e-60 234.6 193 60.6
SGA_v2.0_scaffold62G21594 Striga asiatica HOM05D006034 ORTHO05D007535 6.4e-60 234.6 191 59.2
ECA234G0840 Erigeron canadensis HOM05D006034 ORTHO05D001756 8.3e-60 234.2 191 59.7
Manes.03G032201 Manihot esculenta HOM05D006034 ORTHO05D007535 2.4e-59 232.6 191 62.8
Prupe.7G212400 Prunus persica HOM05D006034 ORTHO05D007535 5.4e-59 231.5 192 60.9
Lsat_1_v5_gn_5_145641 Lactuca sativa HOM05D006034 ORTHO05D007535 7.0e-59 231.1 193 58.0
Cc06_g11190 Coffea canephora HOM05D006034 ORTHO05D007535 1.2e-58 230.3 191 58.6
MD15G1204600 Malus domestica HOM05D006034 ORTHO05D007535 1.2e-58 230.3 193 58.5
Lalb_Chr24g0393801 Lupinus albus HOM05D006034 ORTHO05D007535 2.1e-58 229.6 191 57.6
EL10Ac8g19307 Beta vulgaris HOM05D006034 ORTHO05D007535 2.7e-58 229.2 134 86.6
PSO210G3620 Papaver somniferum HOM05D006034 ORTHO05D007535 2.7e-58 229.2 191 62.8
QL02p062983 Quercus lobata HOM05D006034 ORTHO05D007535 2.7e-58 229.2 191 63.4
Thecc.09G091900 Theobroma cacao HOM05D006034 ORTHO05D007535 2.7e-58 229.2 193 62.2
HanXRQChr12g0354751 Helianthus annuus HOM05D006034 ORTHO05D007535 4.6e-58 228.4 193 57.0
TPR.G35498 Trifolium pratense HOM05D006034 ORTHO05D007535 4.6e-58 228.4 190 57.9
Medtr4g036675 Medicago truncatula HOM05D006034 ORTHO05D007535 1.3e-57 226.9 190 57.4
PSO210G1139 Papaver somniferum HOM05D006034 ORTHO05D007535 1.3e-57 226.9 191 62.8
Aqoxy7G04066 Aquilegia oxysepala HOM05D006034 ORTHO05D007535 3.9e-57 225.3 191 56.5
CiPaw.03G217800 Carya illinoinensis HOM05D006034 ORTHO05D007535 1.9e-56 223.0 193 60.6
MD02G1076200 Malus domestica HOM05D006034 ORTHO05D007535 2.5e-56 222.6 193 57.5
Sopen12g003720 Solanum pennellii HOM05D006034 ORTHO05D007535 2.5e-56 222.6 191 58.6
Glyma.07G128800 Glycine max HOM05D006034 ORTHO05D007535 3.3e-56 222.2 190 56.3
Sed0009633 Sechium edule HOM05D006034 ORTHO05D007535 3.3e-56 222.2 191 57.6
Lj2g0022455 Lotus japonicus HOM05D006034 ORTHO05D007535 4.3e-56 221.9 190 57.4
HPP92_023401 Vanilla planifolia HOM05D006034 ORTHO05D007535 5.6e-56 221.5 223 51.1
arahy.Tifrunner.gnm1.ann1.VJWZ4U Arachis hypogaea HOM05D006034 ORTHO05D007535 7.3e-56 221.1 190 62.1
MELO3C015455.2 Cucumis melo HOM05D006034 ORTHO05D007535 7.3e-56 221.1 191 56.0
SEGI_04673 Sequoiadendron giganteum HOM05D006034 ORTHO05D007535 6.2e-55 218.0 191 54.5
Psat1g049600 Pisum sativum HOM05D006034 ORTHO05D007535 8.1e-55 217.6 190 55.3
VMungo0464G0679 Vigna mungo HOM05D006034 ORTHO05D007535 8.1e-55 217.6 190 54.7
arahy.Tifrunner.gnm1.ann1.JYMB6X Arachis hypogaea HOM05D006034 ORTHO05D007535 1.4e-54 216.9 190 61.1
Zm00001eb361670 Zea mays HOM05D006034 ORTHO05D007535 4.0e-54 215.3 191 56.5
Glyma.01G003200 Glycine max HOM05D006034 ORTHO05D007535 5.2e-54 214.9 190 58.9
THA.LOC104807985 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 6.8e-54 214.5 218 51.8
FAN28G0362 Fragaria x ananassa HOM05D006034 ORTHO05D007535 2.0e-53 213.0 134 74.6
Lj7C673T11 Lonicera japonica HOM05D006034 ORTHO05D007535 4.4e-53 211.8 191 58.6
Mapoly0014s0071 Marchantia polymorpha HOM05D006034 ORTHO05D007535 5.8e-53 211.5 192 52.1
Eucgr.C00910 Eucalyptus grandis HOM05D006034 ORTHO05D007535 7.5e-53 211.1 191 58.6
TWI32G0461 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 9.9e-53 210.7 132 72.7
ATR0705G153 Amborella trichopoda HOM05D006034 ORTHO05D007535 2.4e-51 206.1 193 56.5
CsaV3_1G040270 Cucumis sativus L. HOM05D006034 ORTHO05D007535 3.2e-51 205.7 132 70.5
Hma1.2p1_0800F.1_g219990 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 5.4e-51 204.9 132 71.2
SMO118G0489 Selaginella moellendorffii HOM05D006034 ORTHO05D007535 5.4e-51 204.9 193 51.3
Os01g0722100 Oryza sativa ssp. japonica HOM05D006034 ORTHO05D007535 9.2e-51 204.1 193 58.0
Actinidia25263 Actinidia chinensis HOM05D006034 ORTHO05D007535 7.8e-50 201.1 132 73.5
Hund24744 Selenicereus undatus HOM05D006034 ORTHO05D007535 3.0e-49 199.1 170 63.5
Solyc12g008790.3 Solanum lycopersicum HOM05D006034 ORTHO05D007535 2.1e-47 193.0 132 70.5
Pp3c5_18660 Physcomitrium patens HOM05D006034 ORTHO05D007535 6.2e-47 191.4 193 46.6
PGR142G3838 Punica granatum HOM05D006034 ORTHO05D007535 2.6e-45 186.0 191 51.8
Sabra06G0118900 Salix brachista HOM05D006034 ORTHO05D007535 5.8e-45 184.9 191 52.9
AL7G22860 Arabidopsis lyrata HOM05D006034 ORTHO05D007535 4.9e-44 181.8 217 49.3
BcaB03g12611 Brassica carinata HOM05D006034 ORTHO05D007535 6.4e-44 181.4 191 52.9
Oeu021834.2 Olea europaea HOM05D006034 ORTHO05D007535 8.4e-44 181.0 190 53.7
Carub.0007s1101 Capsella rubella HOM05D006034 ORTHO05D007535 1.9e-43 179.9 193 51.8
Duzib150G0162 Durio zibethinus HOM05D006034 ORTHO05D007535 7.1e-43 177.9 125 68.0
C03p89230 Brassica napus HOM05D006034 ORTHO05D007535 9.2e-43 177.6 191 52.4
BraA08t33919Z Brassica rapa HOM05D006034 ORTHO05D007535 1.6e-42 176.8 189 52.4
CARHR237370 Cardamine hirsuta HOM05D006034 ORTHO05D007535 1.6e-42 176.8 217 47.5
Sp7g27400 Schrenkiella parvula HOM05D006034 ORTHO05D007535 1.6e-42 176.8 191 52.9
THA.LOC104827538 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 1.6e-42 176.8 191 52.4
A08p19610 Brassica napus HOM05D006034 ORTHO05D007535 2.1e-42 176.4 189 52.4
BolC3t21232H Brassica oleracea HOM05D006034 ORTHO05D007535 2.1e-42 176.4 191 51.8
SalBow6G0258 Salvia bowleyana HOM05D006034 ORTHO05D007535 3.5e-42 175.6 191 49.7
BcaC01g01176 Brassica carinata HOM05D006034 ORTHO05D007535 1.7e-41 173.3 191 50.8
BcaC09g51741 Brassica carinata HOM05D000577 ORTHO05D007535 1.5e-40 170.2 191 49.7
CBR_g36936 Chara braunii HOM05D006034 ORTHO05D007535 3.3e-40 169.1 192 44.3
CsaV3_UNG066530 Cucumis sativus L. HOM05D006034 ORTHO05D007535 8.4e-36 154.5 108 65.7
Atru.chr7.1566 Acer truncatum HOM05D006034 ORTHO05D007535 2.4e-35 152.9 134 61.2
THA.LOC104814611 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 2.4e-35 152.9 104 67.3
Aa31LG2G20940 Aethionema arabicum HOM05D006034 ORTHO05D007535 5.4e-35 151.8 260 39.6
AagrBONN_evm.TU.Sc2ySwM_228.1841 Anthoceros agrestis HOM05D006034 ORTHO05D007535 1.6e-34 150.2 221 41.2
MD13G1273400 Malus domestica HOM05D006034 ORTHO05D007535 1.0e-33 147.5 146 53.4
Ca_25619_v3 Cicer arietinum L. HOM05D006034 ORTHO05D007535 2.3e-33 146.4 97 62.9
Sed0024135 Sechium edule HOM05D006034 ORTHO05D007535 7.3e-32 141.4 98 65.3
Nn8g38904 Nelumbo nucifera HOM05D006034 ORTHO05D007535 1.3e-31 140.6 235 40.9
Phvul.004G171500 Phaseolus vulgaris HOM05D006034 ORTHO05D007535 2.1e-31 139.8 97 67.0
Sc18g0001930 Simmondsia chinensis HOM05D006034 ORTHO05D007535 8.1e-31 137.9 134 57.5
C01p09780 Brassica napus HOM05D006034 ORTHO05D007535 1.7e-28 130.2 149 45.0
PRCOL_00006271 Prasinoderma coloniale HOM05D006034 ORTHO05D007535 6.4e-28 128.3 147 41.5
ClCG03G015740 Citrullus lanatus HOM05D000085 ORTHO05D001756 6.0e-26 121.7 162 42.0
Nitab4.5_0000540g0250 Nicotiana tabacum HOM05D006034 ORTHO05D007535 6.7e-25 118.2 162 42.6
Nitab4.5_0011903g0020 Nicotiana tabacum HOM05D006034 ORTHO05D007535 8.7e-25 117.9 162 48.8
vmacro17221 Vaccinium macrocarpon HOM05D006034 ORTHO05D007535 1.9e-24 116.7 165 46.7
CDE05G1399 Ceratophyllum demersum HOM05D006034 ORTHO05D007535 3.3e-24 115.9 193 36.8
Thhalv10025613m.g Eutrema salsugineum HOM05D006034 ORTHO05D007535 2.1e-23 113.2 191 40.3
Hma1.2p1_0800F.1_g219980 Hydrangea macrophylla HOM05D006034 ORTHO05D007535 2.1e-23 113.2 69 71.0
Haze_25892 Corylus avellana HOM05D006034 ORTHO05D007535 2.6e-21 106.3 162 43.8
arahy.Tifrunner.gnm1.ann1.ZF8ARW Arachis hypogaea HOM05D006034 ORTHO05D007535 1.7e-20 103.6 62 74.2
TWI34G0201 Tripterygium wilfordii HOM05D006034 ORTHO05D007535 2.9e-20 102.8 68 67.6
Ca_29456_v3 Cicer arietinum L. HOM05D003386 ORTHO05D007535 4.9e-20 102.1 189 32.3
Rhsim05G0022600 Rhododendron simsii HOM05D000085 ORTHO05D001756 6.4e-20 101.7 100 54.0
MBI01_g02257_MAGBIO Magnolia biondii HOM05D006034 ORTHO05D007535 1.4e-19 100.5 186 38.7
arahy.Tifrunner.gnm1.ann1.N9NTP8 Arachis hypogaea HOM05D000344 ORTHO05D005296 1.9e-19 100.1 62 72.6
arahy.Tifrunner.gnm1.ann1.9T8A1S Arachis hypogaea HOM05D006034 ORTHO05D007535 1.2e-18 97.4 62 69.4
arahy.Tifrunner.gnm1.ann1.4X02I9 Arachis hypogaea HOM05D006034 ORTHO05D007535 7.9e-18 94.7 62 67.7
CSS0007101 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 5.1e-17 92.0 95 52.6
MD17G1181800 Malus domestica HOM05D006034 ORTHO05D007535 5.1e-17 92.0 56 73.2
arahy.Tifrunner.gnm1.ann1.UHY7MZ Arachis hypogaea HOM05D006034 ORTHO05D005279 3.3e-16 89.4 69 63.8
Peaxi162Scf00498g00128 Petunia axillaris HOM05D006034 ORTHO05D007535 1.6e-15 87.0 68 67.6
BolC1t00956H Brassica oleracea HOM05D000577 ORTHO05D001093 2.1e-15 86.7 63 58.7
C01p09900 Brassica napus HOM05D006034 ORTHO05D007535 2.8e-15 86.3 80 50.0
DCAR_011988 Daucus carota HOM05D006034 ORTHO05D007535 1.1e-14 84.3 94 47.9
arahy.Tifrunner.gnm1.ann1.RIAB4B Arachis hypogaea HOM05D006034 ORTHO05D007535 1.4e-14 84.0 51 74.5
THA.LOC109116077 Tarenaya hassleriana HOM05D006034 ORTHO05D007535 1.5e-13 80.5 69 56.5
C01p09940 Brassica napus HOM05D000577 ORTHO05D007535 2.9e-12 76.3 80 48.8
Haze_27155 Corylus avellana HOM05D003386 ORTHO05D007535 3.5e-10 69.3 141 39.0
CSS0015474 Camellia sinensis var. sinensis HOM05D006034 ORTHO05D007535 1.8e-09 67.0 93 46.2
BcaC09g52218 Brassica carinata HOM05D006034 ORTHO05D007535 7.4e-08 61.6 74 43.2
AT4G29540 Arabidopsis thaliana HOM05D006034 ORTHO05D007535 1.4e-06 57.4 58 48.3


User provided reference genes

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