Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 0.0e+00 1270.8 686 100.0
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 1.7e-299 1032.3 575 94.6
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 8.7e-224 780.8 737 63.6
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 8.0e-161 571.6 701 52.5
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 3.6e-153 546.2 710 51.1
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 4.0e-128 463.0 648 45.4
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 3.4e-111 406.8 665 41.1
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 9.3e-109 398.7 679 41.4
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 3.8e-102 376.7 671 37.9
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 4.6e-100 369.8 736 36.5
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 6.2e-97 359.4 717 36.7
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 4.5e-95 353.2 673 37.1
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 3.8e-94 350.1 669 38.3
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 8.4e-94 349.0 651 38.4
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 1.1e-93 348.6 794 34.6
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 2.4e-93 347.4 647 37.7
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 4.2e-93 346.7 725 37.7
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 2.1e-92 344.4 644 38.4
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 3.5e-92 343.6 667 37.8
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 1.3e-91 341.7 570 39.3
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 8.7e-91 339.0 720 35.3
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 5.6e-90 336.3 721 35.2
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 6.2e-89 332.8 656 36.9
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 1.4e-88 331.6 668 37.0
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.8e-88 331.3 649 38.2
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.4e-88 330.9 666 37.4
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 9.0e-88 328.9 656 37.5
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 1.5e-87 328.2 654 35.8
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 7.6e-87 325.9 716 34.8
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 1.0e-86 325.5 669 36.6
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.7e-86 324.7 703 35.4
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 6.5e-86 322.8 670 36.0
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 6.5e-86 322.8 670 36.0
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 2.5e-85 320.9 650 34.8
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 2.5e-85 320.9 659 36.0
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 3.2e-85 320.5 644 35.2
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 5.5e-85 319.7 611 38.1
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 2.7e-84 317.4 622 38.1
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 3.5e-84 317.0 615 38.9
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 6.0e-84 316.2 665 35.2
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 7.9e-84 315.8 686 36.2
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 1.8e-83 314.7 660 34.8
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 4.3e-82 310.1 650 36.2
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 4.3e-82 310.1 665 34.0
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 7.4e-82 309.3 673 34.9
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 9.7e-82 308.9 657 33.6
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 4.8e-81 306.6 676 34.9
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 4.8e-81 306.6 667 36.1
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 4.8e-81 306.6 667 35.5
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 6.3e-81 306.2 651 36.1
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 8.2e-81 305.8 633 34.8
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 5.3e-80 303.1 665 35.8
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 6.9e-80 302.8 655 35.7
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 1.2e-79 302.0 660 35.5
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 1.2e-79 302.0 660 35.5
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 1.2e-79 302.0 660 35.5
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 2.6e-79 300.8 719 34.9
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 3.8e-78 297.0 658 35.0
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 6.5e-78 296.2 709 34.8
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 8.5e-78 295.8 635 35.3
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 6.1e-76 289.7 651 35.8
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 1.4e-75 288.5 569 36.4
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 5.7e-74 283.1 641 33.5
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 5.7e-74 283.1 668 34.0
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 9.7e-74 282.3 703 33.7
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 2.2e-73 281.2 663 32.4
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 6.3e-73 279.6 509 36.9
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 6.3e-73 279.6 651 33.6
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 4.1e-72 276.9 654 33.5
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 2.0e-71 274.6 683 32.8
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 2.6e-71 274.2 666 32.0
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 7.7e-71 272.7 865 30.4
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 2.9e-70 270.8 640 32.8
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 5.0e-70 270.0 631 34.4
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 5.5e-69 266.5 636 34.0
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.7e-68 264.2 686 32.1
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 1.8e-67 261.5 340 47.4
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 8.8e-67 259.2 535 37.0
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 8.8e-67 259.2 642 35.4
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 8.8e-67 259.2 719 32.3
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 2.6e-66 257.7 648 32.7
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 2.8e-65 254.2 700 32.3
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 6.3e-65 253.1 289 48.1
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 1.4e-59 235.3 277 46.9
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 1.7e-57 228.4 523 35.2
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 1.1e-56 225.7 682 30.1
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.2e-52 212.2 265 42.6
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 9.7e-50 202.6 733 28.1
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 1.4e-48 198.7 228 48.2
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 1.8e-43 181.8 539 29.1
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 3.3e-37 161.0 152 59.2
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 1.3e-30 139.0 412 29.4
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 1.7e-30 138.7 659 25.9
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 3.1e-27 127.9 151 48.3
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 1.2e-26 125.9 123 58.5
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 4.1e-24 117.5 208 34.1
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 2.0e-23 115.2 154 44.8
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 6.0e-23 113.6 164 45.1
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 6.6e-22 110.2 353 28.3
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.5e-21 108.2 133 50.4
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 1.2e-15 89.4 305 29.5
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 6.0e-15 87.0 373 29.0
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 3.6e-12 77.8 316 28.2
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 1.3e-09 69.3 90 41.1
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 2.2e-09 68.6 242 29.3
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 4.9e-09 67.4 190 27.4
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 1.9e-08 65.5 379 21.6
Medtr5g019630 Medicago truncatula HOM05D006140 ORTHO05D007834 2.4e-08 65.1 123 39.8
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 2.4e-08 65.1 267 30.0
CBR_g24386 Chara braunii HOM05D006140 ORTHO05D007834 6.0e-07 60.5 136 30.9
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 7.8e-07 60.1 232 26.7


User provided reference genes

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