Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027321 Chenopodium quinoa HOM05D008483 ORTHO05D010726 1.7e-178 630.6 592 100.0
AUR62007411 Chenopodium quinoa HOM05D008483 ORTHO05D010726 8.7e-146 521.9 592 90.7
EL10Ac5g11926 Beta vulgaris HOM05D008483 ORTHO05D010726 9.1e-95 352.4 265 68.3
CSS0019242 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.9e-52 211.8 269 43.5
CSS0039397 Camellia sinensis var. sinensis HOM05D008483 ORTHO05D010726 1.9e-52 211.8 269 43.5
Hma1.2p1_1933F.1_g308065 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 3.8e-48 197.6 251 43.0
GSVIVG01022790001 Vitis vinifera HOM05D008483 ORTHO05D010726 2.4e-47 194.9 248 41.5
Cfa012968 Carpinus fangiana HOM05D008483 ORTHO05D010726 9.3e-47 193.0 260 41.9
Cc08_g05050 Coffea canephora HOM05D008483 ORTHO05D010726 4.6e-46 190.7 258 42.6
DCAR_008181 Daucus carota HOM05D008483 ORTHO05D010726 6.0e-46 190.3 264 42.0
Haze_21313 Corylus avellana HOM05D003774 ORTHO05D009174 3.3e-44 184.5 218 44.5
Lsat_1_v5_gn_3_23061 Lactuca sativa HOM05D008483 ORTHO05D010726 2.8e-43 181.4 223 40.8
Actinidia18161 Actinidia chinensis HOM05D008483 ORTHO05D010726 2.6e-41 174.9 248 39.1
MBI16_g32672_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 3.4e-41 174.5 217 39.6
MD12G1033400 Malus domestica HOM05D008483 ORTHO05D010726 1.6e-38 165.6 241 39.8
Nitab4.5_0002941g0070 Nicotiana tabacum HOM05D008483 ORTHO05D010726 3.0e-37 161.4 186 41.4
Nn8g41093 Nelumbo nucifera HOM05D008483 ORTHO05D010726 3.9e-37 161.0 217 41.5
Nitab4.5_0000030g0110 Nicotiana tabacum HOM05D008483 ORTHO05D010726 5.6e-36 157.1 188 41.5
HanXRQChr17g0536561 Helianthus annuus HOM05D008483 ORTHO05D010726 2.8e-35 154.8 237 37.1
Duzib213G0258 Durio zibethinus HOM05D008483 ORTHO05D010726 1.8e-34 152.1 218 36.7
Prupe.1G555500 Prunus persica HOM05D008483 ORTHO05D010726 6.9e-34 150.2 222 38.7
Thecc.07G080600 Theobroma cacao HOM05D008483 ORTHO05D010726 6.9e-34 150.2 257 36.6
Oeu019187.1 Olea europaea HOM05D008483 ORTHO05D010726 9.0e-34 149.8 267 33.7
Sabra15G0030100 Salix brachista HOM05D008483 ORTHO05D010726 2.6e-33 148.3 212 39.2
Rhsim12G0158300 Rhododendron simsii HOM05D008483 ORTHO05D010726 5.8e-33 147.1 164 44.5
Sabra15G0031000 Salix brachista HOM05D008483 ORTHO05D010726 8.4e-32 143.3 212 38.7
Potri.015G036400 Populus trichocarpa HOM05D008483 ORTHO05D010726 1.9e-31 142.1 212 38.2
Prupe.1G569400 Prunus persica HOM05D008483 ORTHO05D010726 2.5e-31 141.7 221 36.7
Gohir.D01G051900 Gossypium hirsutum HOM05D008483 ORTHO05D010726 2.7e-30 138.3 234 33.8
Gorai.002G071800 Gossypium raimondii HOM05D008483 ORTHO05D010726 6.0e-30 137.1 234 33.3
Hma1.2p1_0560F.1_g178890 Hydrangea macrophylla HOM05D008483 ORTHO05D010726 6.0e-30 137.1 164 42.1
Cpa.g.sc137.16 Carica papaya HOM05D008483 ORTHO05D010726 1.0e-29 136.3 221 35.7
TWI60G0009 Tripterygium wilfordii HOM05D008483 ORTHO05D010726 1.0e-29 136.3 218 37.6
Gohir.A01G064800 Gossypium hirsutum HOM05D008483 ORTHO05D010726 3.9e-29 134.4 209 35.4
MBI13_g10040_MAGBIO Magnolia biondii HOM05D008483 ORTHO05D010726 2.0e-25 122.1 164 38.4
TAR381G0371 Trochodendron aralioides HOM05D008483 ORTHO05D010726 1.6e-22 112.5 153 37.9
Ciclev10013671m.g Citrus clementina HOM05D008483 ORTHO05D010726 6.1e-22 110.5 199 32.7
Eucgr.A00288 Eucalyptus grandis HOM05D008483 ORTHO05D010726 3.0e-21 108.2 182 33.5
Ciclev10003653m.g Citrus clementina HOM05D008483 ORTHO05D010726 3.9e-21 107.8 254 31.5
ECA246G3844 Erigeron canadensis HOM05D008483 ORTHO05D010726 1.9e-20 105.5 158 32.9
THA.LOC104812723 Tarenaya hassleriana HOM05D008483 ORTHO05D010726 9.7e-20 103.2 259 29.0
Thhalv10009444m.g Eutrema salsugineum HOM05D008483 ORTHO05D010726 2.2e-19 102.1 260 28.5
AT1G31840 Arabidopsis thaliana HOM05D008483 ORTHO05D010726 8.2e-19 100.1 256 29.3
Aa31LG2G14190 Aethionema arabicum HOM05D008483 ORTHO05D010726 1.2e-17 96.3 248 28.6
Sp1g27550 Schrenkiella parvula HOM05D008483 ORTHO05D010726 3.8e-16 91.3 270 27.0
ATR1089G063 Amborella trichopoda HOM05D008483 ORTHO05D010726 1.9e-15 89.0 151 34.4
Lsat_1_v5_gn_5_112121 Lactuca sativa HOM05D008483 ORTHO05D010726 2.8e-11 75.1 79 48.1
Nn1g03517 Nelumbo nucifera HOM05D002890 ORTHO05D009847 6.3e-11 73.9 218 25.2
Carub.0001s3017 Capsella rubella HOM05D008483 ORTHO05D010726 3.1e-10 71.6 169 28.4
EL10Ac6g15406 Beta vulgaris HOM05D007496 ORTHO05D009479 3.4e-09 68.2 165 29.7
RcHm_v2.0_Chr2g0139321 Rosa chinensis HOM05D008483 ORTHO05D010726 1.7e-08 65.9 154 29.9
Ah.02g120040 Amaranthus hybridus HOM05D007496 ORTHO05D009479 2.9e-08 65.1 166 27.7
CARHR144810 Cardamine hirsuta HOM05D007496 ORTHO05D009479 3.8e-08 64.7 74 40.5
MD13G1010200 Malus domestica HOM05D007496 ORTHO05D009479 6.5e-08 63.9 83 36.1
BraA06t27256Z Brassica rapa HOM05D007496 ORTHO05D009479 1.1e-07 63.2 74 39.2
MELO3C011779.2 Cucumis melo HOM05D008657 ORTHO05D010869 1.9e-07 62.4 232 23.3
Prupe.1G342600 Prunus persica HOM05D007496 ORTHO05D009479 1.9e-07 62.4 83 36.1
MSTRG.22851 Avicennia marina HOM05D005764 ORTHO05D006600 5.5e-07 60.8 173 26.6
Lsat_1_v5_gn_3_27601 Lactuca sativa HOM05D007496 ORTHO05D009479 5.5e-07 60.8 83 34.9
SEGI_21536 Sequoiadendron giganteum HOM05D007639 ORTHO05D009509 5.5e-07 60.8 176 24.4
A06p43780 Brassica napus HOM05D007496 ORTHO05D009479 7.2e-07 60.5 74 37.8
PSO017G5257 Papaver somniferum HOM05D007545 ORTHO05D009579 7.2e-07 60.5 221 21.7
vmacro17185 Vaccinium macrocarpon HOM05D007496 ORTHO05D009479 9.4e-07 60.1 83 33.7
QL03p041883 Quercus lobata HOM05D007496 ORTHO05D009479 1.2e-06 59.7 83 34.9
PSO478G2209 Papaver somniferum HOM05D007545 ORTHO05D009579 2.1e-06 58.9 221 21.7
CSS0001323 Camellia sinensis var. sinensis HOM05D002890 ORTHO05D009847 2.7e-06 58.5 211 21.3
PGSC0003DMG402030517 Solanum tuberosum HOM05D007426 ORTHO05D009167 2.7e-06 58.5 208 22.6
PGR042G2810 Punica granatum HOM05D005764 ORTHO05D006600 3.6e-06 58.2 215 21.9
SGA_v2.0_scaffold45G17151 Striga asiatica HOM05D007545 ORTHO05D009579 3.6e-06 58.2 151 27.2
Cpa.g.sc116.47 Carica papaya HOM05D007291 ORTHO05D009038 6.1e-06 57.4 166 27.1
CsaV3_5G029290 Cucumis sativus L. HOM05D008657 ORTHO05D010869 6.1e-06 57.4 215 22.8
Nitab4.5_0001650g0170 Nicotiana tabacum HOM05D007545 ORTHO05D009579 6.1e-06 57.4 205 23.4
Sopen05g004400 Solanum pennellii HOM05D007426 ORTHO05D009167 6.1e-06 57.4 208 21.6
Cpa.g.c26548.5 Carica papaya HOM05D004783 ORTHO05D005581 7.9e-06 57.0 219 21.9


User provided reference genes

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