Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027126 Chenopodium quinoa HOM05D007101 ORTHO05D008632 1.4e-180 637.5 798 100.0
AUR62012916 Chenopodium quinoa HOM05D007101 ORTHO05D008632 4.5e-155 552.7 798 93.6
Ah.01g023750 Amaranthus hybridus HOM05D000564 ORTHO05D002780 3.8e-114 416.8 797 80.8
EL10Ac9g21242 Beta vulgaris HOM05D007101 ORTHO05D008632 1.5e-102 378.3 798 83.3
Sc14g0002450 Simmondsia chinensis HOM05D007101 ORTHO05D008632 1.6e-83 315.1 802 78.6
Hund06163 Selenicereus undatus HOM05D007101 ORTHO05D008632 7.3e-81 306.2 801 78.4
COL.COLO4_17930 Corchorus olitorius HOM05D007101 ORTHO05D008632 1.3e-74 285.4 803 73.1
CSS0049741 Camellia sinensis var. sinensis HOM05D007101 ORTHO05D008632 6.6e-74 283.1 802 75.3
CiPaw.06G116300 Carya illinoinensis HOM05D007101 ORTHO05D008632 7.3e-73 279.6 785 77.3
GSVIVG01023885001 Vitis vinifera HOM05D007101 ORTHO05D008632 9.5e-73 279.3 802 76.8
Duzib132G1059 Durio zibethinus HOM05D007101 ORTHO05D008632 3.6e-72 277.3 803 75.3
ClCG02G003480 Citrullus lanatus HOM05D007101 ORTHO05D008632 8.9e-71 272.7 798 75.2
MELO3C013256.2 Cucumis melo HOM05D007101 ORTHO05D008632 1.6e-67 261.9 798 71.2
CsaV3_7G001820 Cucumis sativus L. HOM05D007101 ORTHO05D008632 2.3e-66 258.1 798 70.7
Peaxi162Scf00818g00019 Petunia axillaris HOM05D007101 ORTHO05D008632 8.6e-66 256.1 801 75.3
TAR376G1071 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.1e-65 255.8 804 72.9
Cpa.g.sc20.207 Carica papaya HOM05D007101 ORTHO05D008632 2.5e-65 254.6 804 72.4
RcHm_v2.0_Chr6g0280761 Rosa chinensis HOM05D007101 ORTHO05D008632 2.8e-64 251.1 803 68.0
Sed0027220 Sechium edule HOM05D007101 ORTHO05D008632 3.6e-64 250.8 799 67.5
Rhsim01G0003500 Rhododendron simsii HOM05D007101 ORTHO05D008632 9.9e-62 242.7 801 75.2
TWI15G0633 Tripterygium wilfordii HOM05D007101 ORTHO05D008632 1.7e-61 241.9 802 72.3
Potri.004G205600 Populus trichocarpa HOM05D007101 ORTHO05D008632 4.9e-61 240.4 368 71.2
FAN15G1235 Fragaria x ananassa HOM05D007101 ORTHO05D008632 5.4e-60 236.9 803 73.2
SGA_v2.0_scaffold32G13346 Striga asiatica HOM05D007101 ORTHO05D008632 9.3e-60 236.1 802 73.2
Actinidia17999 Actinidia chinensis HOM05D007101 ORTHO05D008632 1.6e-59 235.3 370 70.5
SalBow1G7566 Salvia bowleyana HOM05D007101 ORTHO05D008632 1.6e-59 235.3 801 70.4
THA.LOC104819686 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 1.6e-59 235.3 803 73.3
Sabra04G0138800 Salix brachista HOM05D007101 ORTHO05D008632 6.0e-59 233.4 368 70.1
FvH4_2g16640 Fragaria vesca HOM05D007101 ORTHO05D008632 1.7e-58 231.9 803 73.5
MD10G1139700 Malus domestica HOM05D007101 ORTHO05D008632 1.1e-57 229.2 365 70.7
Thecc.02G044400 Theobroma cacao HOM05D007101 ORTHO05D008632 1.1e-57 229.2 804 73.4
Manes.11G110800 Manihot esculenta HOM05D007101 ORTHO05D008632 1.5e-57 228.8 803 74.2
Aqoxy6G01656 Aquilegia oxysepala HOM05D007101 ORTHO05D008632 2.5e-57 228.0 805 71.1
Gohir.D04G170700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 4.3e-57 227.3 802 73.4
QL11p055950 Quercus lobata HOM05D007101 ORTHO05D008632 9.6e-57 226.1 369 69.9
Gorai.012G159300 Gossypium raimondii HOM05D007101 ORTHO05D008632 6.2e-56 223.4 803 73.1
Dinv41876 Davidia involucrata HOM05D007101 ORTHO05D008632 1.1e-55 222.6 368 43.8
VMungo0251G0107 Vigna mungo HOM05D007101 ORTHO05D008632 1.1e-55 222.6 811 61.0
CAN.G157.9 Capsicum annuum HOM05D007101 ORTHO05D008632 1.4e-55 222.2 365 71.0
Haze_02013 Corylus avellana HOM05D007101 ORTHO05D008632 5.3e-55 220.3 373 68.6
Prupe.8G178500 Prunus persica HOM05D007101 ORTHO05D008632 9.0e-55 219.5 368 68.8
Cfa005353 Carpinus fangiana HOM05D007101 ORTHO05D008632 4.4e-54 217.2 373 68.4
Gohir.A04G125700 Gossypium hirsutum HOM05D007101 ORTHO05D008632 4.4e-54 217.2 805 72.8
Lj4g0005302 Lotus japonicus HOM05D007101 ORTHO05D008632 5.8e-54 216.9 804 67.3
Lalb_Chr05g0218081 Lupinus albus HOM05D007101 ORTHO05D008632 4.9e-53 213.8 801 65.2
vmacro02332 Vaccinium macrocarpon HOM05D007101 ORTHO05D008632 6.4e-53 213.4 830 69.8
PGSC0003DMG400019836 Solanum tuberosum HOM05D007101 ORTHO05D008632 1.9e-52 211.8 366 69.4
Sopen02g005320 Solanum pennellii HOM05D007101 ORTHO05D008632 7.8e-51 206.5 366 69.1
Phvul.002G220400 Phaseolus vulgaris HOM05D007101 ORTHO05D008632 1.3e-50 205.7 369 67.2
Solyc02g021020.4 Solanum lycopersicum HOM05D007101 ORTHO05D008632 1.3e-50 205.7 366 68.9
Ciclev10027787m.g Citrus clementina HOM05D007101 ORTHO05D008632 8.7e-50 203.0 803 70.7
MSTRG.17820 Avicennia marina HOM05D007101 ORTHO05D008632 9.6e-49 199.5 367 65.7
PGR142G0716 Punica granatum HOM05D007101 ORTHO05D008632 2.1e-48 198.4 803 69.6
Cc03_g11620 Coffea canephora HOM05D007101 ORTHO05D008632 1.1e-47 196.1 426 55.4
Glyma.08G060600 Glycine max HOM05D007101 ORTHO05D008632 5.3e-47 193.7 368 64.9
Nitab4.5_0000526g0060 Nicotiana tabacum HOM05D007101 ORTHO05D008632 3.4e-46 191.0 780 73.3
Nitab4.5_0006710g0010 Nicotiana tabacum HOM05D007101 ORTHO05D008632 5.8e-46 190.3 780 73.2
Migut.B00010 Erythranthe guttata HOM05D007101 ORTHO05D008632 7.6e-46 189.9 799 71.1
DCAR_015659 Daucus carota HOM05D000046 ORTHO05D008632 9.9e-46 189.5 804 71.8
arahy.Tifrunner.gnm1.ann1.RGU3X9 Arachis hypogaea HOM05D007101 ORTHO05D008632 1.3e-45 189.1 365 64.4
TAR629G2938 Trochodendron aralioides HOM05D007101 ORTHO05D008632 1.7e-45 188.7 180 55.6
C07p06350 Brassica napus HOM05D007101 ORTHO05D008632 2.2e-45 188.3 366 63.1
arahy.Tifrunner.gnm1.ann1.RR3D2P Arachis hypogaea HOM05D007101 ORTHO05D008632 2.9e-45 188.0 365 64.4
Thhalv10022542m.g Eutrema salsugineum HOM05D007101 ORTHO05D008632 4.9e-45 187.2 366 63.1
BcaB03g16462 Brassica carinata HOM05D007101 ORTHO05D008632 8.4e-45 186.4 366 64.8
AL3G49990 Arabidopsis lyrata HOM05D007101 ORTHO05D008632 1.9e-44 185.3 366 63.4
arahy.Tifrunner.gnm1.ann1.X169V3 Arachis hypogaea HOM05D007101 ORTHO05D008632 2.7e-43 181.4 361 64.0
CARHR293460 Cardamine hirsuta HOM05D007101 ORTHO05D008632 4.6e-43 180.6 366 63.9
Aa31LG8G14540 Aethionema arabicum HOM05D007101 ORTHO05D008632 5.1e-42 177.2 361 62.9
Ca_18469_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 6.7e-42 176.8 802 63.3
Ca_30070_v3 Cicer arietinum L. HOM05D007101 ORTHO05D008632 6.7e-42 176.8 802 63.3
HanXRQChr12g0374451 Helianthus annuus HOM05D007101 ORTHO05D008632 2.5e-41 174.9 798 68.3
BcaC06g36224 Brassica carinata HOM05D007101 ORTHO05D008632 5.6e-41 173.7 366 61.7
A07p03990 Brassica napus HOM05D007101 ORTHO05D008632 5.6e-41 173.7 366 61.7
BolC7t41051H Brassica oleracea HOM05D007101 ORTHO05D008632 5.6e-41 173.7 366 61.7
BraA07t28190Z Brassica rapa HOM05D007101 ORTHO05D008632 5.6e-41 173.7 366 61.7
Eucgr.I01520 Eucalyptus grandis HOM05D007101 ORTHO05D008632 1.3e-40 172.6 366 64.2
ECA233G4336 Erigeron canadensis HOM05D000046 ORTHO05D014757 3.7e-40 171.0 370 63.0
Oeu059796.1 Olea europaea HOM05D007101 ORTHO05D008632 1.1e-39 169.5 178 48.3
AT2G17140 Arabidopsis thaliana HOM05D007101 ORTHO05D008632 1.8e-39 168.7 366 62.8
TPR.G15380 Trifolium pratense HOM05D007101 ORTHO05D008632 2.0e-38 165.2 369 64.2
Rhsim11G0197400 Rhododendron simsii HOM05D007101 ORTHO05D008632 4.9e-37 160.6 840 56.2
Atru.chr5.3546 Acer truncatum HOM05D007101 ORTHO05D008632 5.5e-36 157.1 727 75.4
Lj9A406T59 Lonicera japonica HOM05D007101 ORTHO05D008632 1.0e-34 152.9 362 63.0
Lsat_1_v5_gn_8_121281 Lactuca sativa HOM05D007101 ORTHO05D008632 1.5e-33 149.1 171 45.0
Nn1g05331 Nelumbo nucifera HOM05D007101 ORTHO05D008632 1.5e-33 149.1 807 64.2
Os02g0132100 Oryza sativa ssp. japonica HOM05D007101 ORTHO05D008632 1.9e-33 148.7 372 59.9
SHI10554 Sapria himalayana HOM05D007101 ORTHO05D008632 4.3e-33 147.5 779 67.0
CDE04G2490 Ceratophyllum demersum HOM05D007101 ORTHO05D008632 2.0e-30 138.7 119 52.1
Zm00001eb209030 Zea mays HOM05D007101 ORTHO05D008632 2.9e-29 134.8 365 58.6
PSO675G0367 Papaver somniferum HOM05D007101 ORTHO05D008632 7.1e-28 130.2 364 60.2
Carub.0003s3107 Capsella rubella HOM05D007101 ORTHO05D008632 2.1e-27 128.6 366 58.5
unitig_32.g11014 Utricularia gibba HOM05D007101 ORTHO05D008632 1.9e-25 122.1 169 38.5
TAR629G1847 Trochodendron aralioides HOM05D007101 ORTHO05D008632 3.3e-25 121.3 98 60.2
HPP92_025842 Vanilla planifolia HOM05D007101 ORTHO05D008632 1.3e-24 119.4 378 55.0
MD05G1134700 Malus domestica HOM05D007101 ORTHO05D008632 5.3e-23 114.0 108 54.6
FAN24G2347 Fragaria x ananassa HOM05D007101 ORTHO05D008632 9.0e-23 113.2 803 68.0
Glyma.07G188700 Glycine max HOM05D007101 ORTHO05D008632 2.5e-20 105.1 174 38.5
MBI06_g35039_MAGBIO Magnolia biondii HOM05D007101 ORTHO05D008632 6.1e-19 100.5 390 40.8
Gorai.008G096400 Gossypium raimondii HOM05D007101 ORTHO05D008632 1.5e-17 95.9 123 45.5
Medtr4g091600 Medicago truncatula HOM05D007101 ORTHO05D008632 1.5e-17 95.9 178 33.1
ATR0618G240 Amborella trichopoda HOM05D007101 ORTHO05D008632 2.2e-16 92.0 381 52.0
MD05G1134600 Malus domestica HOM05D007101 ORTHO05D008632 2.2e-16 92.0 69 58.0
Sp3g30480 Schrenkiella parvula HOM05D007101 ORTHO05D008632 5.0e-13 80.9 93 40.9
THA.LOC104807397 Tarenaya hassleriana HOM05D007101 ORTHO05D008632 8.8e-10 70.1 115 39.1
VMungo0251G1721 Vigna mungo HOM05D007101 ORTHO05D008632 2.8e-08 65.1 84 46.4
Glyma.07G160400 Glycine max HOM05D007409 ORTHO05D009264 1.8e-07 62.4 124 33.9
SEGI_21341 Sequoiadendron giganteum HOM05D000891 ORTHO05D002107 3.1e-07 61.6 95 33.7
Atru.chr5.2775 Acer truncatum HOM05D006858 ORTHO05D008767 5.3e-07 60.8 69 37.7
BraA04t16905Z Brassica rapa HOM05D006858 ORTHO05D008767 5.3e-07 60.8 96 31.2
Peaxi162Scf00222g00211 Petunia axillaris HOM05D004824 ORTHO05D003903 5.3e-07 60.8 104 36.5
AL2G40180 Arabidopsis lyrata HOM05D006503 ORTHO05D008116 9.1e-07 60.1 97 36.1
arahy.Tifrunner.gnm1.ann1.H4NKJU Arachis hypogaea HOM05D000104 ORTHO05D009920 1.2e-06 59.7 96 31.2
BcaB06g27361 Brassica carinata HOM05D006858 ORTHO05D008767 1.2e-06 59.7 64 39.1
C04p46110 Brassica napus HOM05D006858 ORTHO05D008767 1.2e-06 59.7 96 30.2
A04p12420 Brassica napus HOM05D006858 ORTHO05D008767 2.0e-06 58.9 96 30.2
BcaB05g25205 Brassica carinata HOM05D006503 ORTHO05D008116 2.6e-06 58.5 97 34.0
AT1G79540 Arabidopsis thaliana HOM05D006503 ORTHO05D008116 3.5e-06 58.2 95 33.7
Duzib213G0999 Durio zibethinus HOM05D007390 ORTHO05D009114 3.5e-06 58.2 101 30.7
Cpa.g.sc9.15 Carica papaya HOM05D007409 ORTHO05D009264 4.5e-06 57.8 114 29.8
Thhalv10018150m.g Eutrema salsugineum HOM05D006503 ORTHO05D008116 4.5e-06 57.8 95 33.7
ATR0598G005 Amborella trichopoda HOM05D008470 ORTHO05D010644 5.9e-06 57.4 66 43.9
arahy.Tifrunner.gnm1.ann1.W2W9XI Arachis hypogaea HOM05D000104 ORTHO05D009920 5.9e-06 57.4 95 30.5
Thhalv10027654m.g Eutrema salsugineum HOM05D006858 ORTHO05D008767 5.9e-06 57.4 94 29.8
RcHm_v2.0_Chr7g0193131 Rosa chinensis HOM05D002804 ORTHO05D003755 7.7e-06 57.0 92 33.7
VMungo1215G2624 Vigna mungo HOM05D007409 ORTHO05D009264 7.7e-06 57.0 122 31.1


User provided reference genes

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