Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 4.3e-88 328.2 192 100.0
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 1.1e-83 313.5 190 95.8
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 2.4e-54 216.1 248 55.2
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 9.1e-54 214.2 196 65.3
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 1.2e-50 203.8 192 59.9
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 2.6e-48 196.1 141 75.9
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 2.6e-40 169.5 193 54.9
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 2.2e-39 166.4 192 53.6
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 1.8e-38 163.3 195 52.8
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 7.0e-38 161.4 195 52.8
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 7.0e-38 161.4 196 51.0
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 9.1e-38 161.0 196 50.0
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 1.2e-37 160.6 190 52.1
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 1.2e-37 160.6 190 52.1
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.6e-37 159.5 198 52.5
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.6e-37 159.5 198 52.5
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 2.6e-37 159.5 192 52.6
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 2.2e-36 156.4 193 50.3
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 3.8e-36 155.6 191 49.7
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 3.8e-36 155.6 191 49.2
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 6.5e-36 154.8 197 49.2
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 6.5e-36 154.8 194 54.6
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 6.5e-36 154.8 191 51.3
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 8.5e-36 154.5 198 51.5
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 1.1e-35 154.1 190 51.6
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 1.1e-35 154.1 190 51.6
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 1.9e-35 153.3 191 50.3
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 2.5e-35 152.9 182 52.2
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 2.5e-35 152.9 192 51.0
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 2.5e-35 152.9 190 52.1
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 3.2e-35 152.5 197 49.7
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 3.2e-35 152.5 191 51.8
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 3.2e-35 152.5 192 53.6
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 4.2e-35 152.1 190 50.5
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 5.5e-35 151.8 202 47.5
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 7.2e-35 151.4 186 50.0
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 7.2e-35 151.4 190 50.5
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 7.2e-35 151.4 192 46.9
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 9.4e-35 151.0 192 50.5
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 9.4e-35 151.0 191 49.2
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 1.2e-34 150.6 198 51.0
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 1.2e-34 150.6 194 50.5
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 1.2e-34 150.6 191 49.2
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 1.2e-34 150.6 190 50.5
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 2.1e-34 149.8 208 50.0
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 2.7e-34 149.4 190 50.0
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 4.7e-34 148.7 198 50.5
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 4.7e-34 148.7 198 50.5
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 6.1e-34 148.3 189 51.3
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 6.1e-34 148.3 194 56.2
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 1.0e-33 147.5 189 52.4
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 1.0e-33 147.5 198 51.0
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 1.0e-33 147.5 190 48.4
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 2.3e-33 146.4 182 50.5
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 3.0e-33 146.0 192 49.0
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 4.0e-33 145.6 193 48.2
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 8.8e-33 144.4 193 48.2
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 1.2e-32 144.1 186 49.5
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 1.5e-32 143.7 206 47.1
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 1.5e-32 143.7 192 48.4
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 1.5e-32 143.7 188 49.5
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 2.0e-32 143.3 195 47.7
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 2.0e-32 143.3 192 46.4
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 2.0e-32 143.3 192 48.4
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 4.4e-32 142.1 189 47.1
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 5.7e-32 141.7 188 47.9
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 5.7e-32 141.7 192 53.6
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 9.7e-32 141.0 195 47.2
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 9.7e-32 141.0 193 47.7
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 1.3e-31 140.6 186 47.8
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 2.2e-31 139.8 192 46.4
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 2.8e-31 139.4 193 49.2
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 2.8e-31 139.4 188 48.9
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 3.7e-31 139.0 122 63.9
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 3.7e-31 139.0 126 67.5
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 6.3e-31 138.3 192 44.8
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 1.1e-30 137.5 186 47.8
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 1.4e-30 137.1 192 44.8
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 3.1e-30 136.0 195 46.7
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 3.1e-30 136.0 196 48.5
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 3.1e-30 136.0 203 45.3
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 5.3e-30 135.2 186 47.3
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 7.0e-30 134.8 204 50.0
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 9.1e-30 134.4 188 50.5
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 1.2e-29 134.0 192 46.4
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 1.2e-29 134.0 192 46.4
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 2.0e-29 133.3 192 43.2
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 2.0e-29 133.3 193 48.7
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 2.0e-29 133.3 191 45.5
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 3.5e-29 132.5 192 45.8
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 4.5e-29 132.1 191 45.0
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 4.5e-29 132.1 192 44.8
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 5.9e-29 131.7 188 44.7
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 5.9e-29 131.7 195 45.1
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 5.9e-29 131.7 205 49.8
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 5.0e-28 128.6 189 45.0
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 5.0e-28 128.6 188 43.6
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 5.0e-28 128.6 188 43.6
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 5.5e-27 125.2 192 42.7
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 7.2e-27 124.8 238 38.7
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 3.6e-26 122.5 126 54.8
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 4.7e-26 122.1 197 53.8
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 6.1e-26 121.7 198 40.9
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 8.0e-26 121.3 190 46.3
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 2.3e-25 119.8 202 42.6
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 2.3e-25 119.8 137 53.3
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 1.5e-24 117.1 187 50.3
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 4.4e-24 115.5 136 52.2
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 4.4e-24 115.5 131 47.3
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 1.7e-23 113.6 180 41.7
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 1.8e-22 110.2 156 46.2
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 9.1e-22 107.8 138 52.2
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 4.5e-21 105.5 162 43.8
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 7.7e-21 104.8 135 50.4
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 5.0e-20 102.1 190 39.5
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 1.5e-19 100.5 132 47.7
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.5e-19 99.8 177 41.8
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 2.5e-19 99.8 133 51.1
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 9.5e-19 97.8 118 50.8
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 3.0e-17 92.8 169 43.2
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 4.4e-16 89.0 93 54.8
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 4.4e-16 89.0 200 39.0
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 3.5e-13 79.3 95 46.3
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 3.5e-13 79.3 89 50.6
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 1.9e-11 73.6 118 40.7
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 9.5e-11 71.2 125 41.6
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 5.8e-08 62.0 81 48.1
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 1.3e-07 60.8 80 45.0
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 1.3e-07 60.8 80 45.0
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 1.4e-06 57.4 114 36.0
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 9.2e-06 54.7 146 33.6
Zm00001eb093520 Zea mays HOM05D005654 ORTHO05D006438 9.2e-06 54.7 44 61.4


User provided reference genes

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