Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027102 Chenopodium quinoa HOM05D006263 ORTHO05D007549 4.0e-207 724.5 368 100.0
AUR62012878 Chenopodium quinoa HOM05D006263 ORTHO05D007549 2.4e-196 688.7 346 95.7
EL10Ac9g22064 Beta vulgaris HOM05D006263 ORTHO05D007549 1.9e-161 572.8 340 80.9
Hund06464 Selenicereus undatus HOM05D006263 ORTHO05D007549 9.5e-161 570.5 339 77.6
Ah.01g007390 Amaranthus hybridus HOM05D006263 ORTHO05D007549 5.1e-146 521.5 436 61.7
Prupe.7G003700 Prunus persica HOM05D006263 ORTHO05D007549 2.1e-131 473.0 347 65.7
Rhsim04G0087300 Rhododendron simsii HOM05D006263 ORTHO05D007549 7.9e-131 471.1 345 65.2
Dinv14580 Davidia involucrata HOM05D006263 ORTHO05D007549 1.8e-130 469.9 339 66.7
Glyma.16G153300 Glycine max HOM05D006263 ORTHO05D007549 3.3e-129 465.7 340 66.2
VMungo0464G2181 Vigna mungo HOM05D006263 ORTHO05D007549 2.1e-128 463.0 340 65.9
Gorai.007G289300 Gossypium raimondii HOM05D006263 ORTHO05D007549 6.2e-128 461.5 349 64.8
GSVIVG01033398001 Vitis vinifera HOM05D006263 ORTHO05D007549 1.1e-127 460.7 346 65.0
Gohir.A11G259300 Gossypium hirsutum HOM05D006263 ORTHO05D007549 2.4e-127 459.5 349 64.8
MD12G1003100 Malus domestica HOM05D006263 ORTHO05D007549 4.0e-127 458.8 346 65.3
Phvul.004G080400 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 5.3e-127 458.4 340 65.6
Gohir.D11G269500 Gossypium hirsutum HOM05D006263 ORTHO05D007549 1.5e-126 456.8 349 64.2
Nn7g35844 Nelumbo nucifera HOM05D006263 ORTHO05D007549 2.6e-126 456.1 341 63.9
Nitab4.5_0002825g0060 Nicotiana tabacum HOM05D006263 ORTHO05D007549 3.4e-126 455.7 346 62.7
COL.COLO4_13602 Corchorus olitorius HOM05D006263 ORTHO05D007549 4.5e-126 455.3 354 63.6
DCAR_013689 Daucus carota HOM05D006263 ORTHO05D007549 4.5e-126 455.3 337 63.5
Oeu060008.1 Olea europaea HOM05D006263 ORTHO05D007549 5.8e-126 454.9 339 63.1
PGSC0003DMG400008259 Solanum tuberosum HOM05D006263 ORTHO05D007549 7.6e-126 454.5 346 64.7
Haze_19416 Corylus avellana HOM05D006263 ORTHO05D007549 1.7e-125 453.4 340 64.4
Solyc10g050850.2 Solanum lycopersicum HOM05D006263 ORTHO05D007549 2.2e-125 453.0 346 64.2
Lalb_Chr06g0173981 Lupinus albus HOM05D006263 ORTHO05D007549 4.9e-125 451.8 354 63.3
MSTRG.20649 Avicennia marina HOM05D006263 ORTHO05D007549 6.5e-125 451.4 336 62.2
Haze_19445 Corylus avellana HOM05D006263 ORTHO05D007549 6.5e-125 451.4 340 64.1
Sopen10g022420 Solanum pennellii HOM05D006263 ORTHO05D007549 1.1e-124 450.7 346 63.9
Cfa016439 Carpinus fangiana HOM05D006263 ORTHO05D007549 1.9e-124 449.9 340 63.8
Nitab4.5_0000001g0100 Nicotiana tabacum HOM05D006263 ORTHO05D007549 1.9e-124 449.9 346 61.8
THA.LOC104827270 Tarenaya hassleriana HOM05D006263 ORTHO05D007549 1.9e-124 449.9 335 64.8
Atru.chr2.1379 Acer truncatum HOM05D006263 ORTHO05D007549 3.2e-124 449.1 341 62.5
CSS0025413 Camellia sinensis var. sinensis HOM05D006263 ORTHO05D007549 4.2e-124 448.7 337 63.8
Thecc.05G294200 Theobroma cacao HOM05D006263 ORTHO05D007549 4.2e-124 448.7 341 64.2
BcaB08g36696 Brassica carinata HOM05D006263 ORTHO05D007549 7.1e-124 448.0 335 64.2
CiPaw.10G000900 Carya illinoinensis HOM05D006263 ORTHO05D007549 7.1e-124 448.0 339 63.7
C09p58780 Brassica napus HOM05D006263 ORTHO05D007549 9.3e-124 447.6 336 63.1
CAN.G216.5 Capsicum annuum HOM05D006263 ORTHO05D007549 9.3e-124 447.6 346 62.7
Lj2A357T95 Lonicera japonica HOM05D006263 ORTHO05D007549 9.3e-124 447.6 339 63.7
PGR042G1093 Punica granatum HOM05D006263 ORTHO05D007549 9.3e-124 447.6 336 64.9
Aqoxy1G00489 Aquilegia oxysepala HOM05D006263 ORTHO05D007549 1.2e-123 447.2 344 62.8
QL07p019666 Quercus lobata HOM05D006263 ORTHO05D007549 2.1e-123 446.4 351 63.5
Lj6g0008715 Lotus japonicus HOM05D006263 ORTHO05D007549 2.7e-123 446.0 339 63.4
Potri.019G034400 Populus trichocarpa HOM05D006263 ORTHO05D007549 2.7e-123 446.0 339 62.5
Carub.0006s1648 Capsella rubella HOM05D006263 ORTHO05D007549 3.5e-123 445.7 333 63.1
PSO339G1401 Papaver somniferum HOM05D006263 ORTHO05D007549 3.5e-123 445.7 338 63.6
Medtr6g029470 Medicago truncatula HOM05D006263 ORTHO05D007549 4.6e-123 445.3 345 63.2
Ciclev10020896m.g Citrus clementina HOM05D006263 ORTHO05D007549 6.0e-123 444.9 353 61.2
Sp6g26120 Schrenkiella parvula HOM05D006263 ORTHO05D007549 6.0e-123 444.9 335 62.4
AT5G18200 Arabidopsis thaliana HOM05D006263 ORTHO05D007549 7.9e-123 444.5 335 62.4
BolC9t58720H Brassica oleracea HOM05D006263 ORTHO05D007549 7.9e-123 444.5 337 63.5
TWI34G1357 Tripterygium wilfordii HOM05D006263 ORTHO05D007549 7.9e-123 444.5 345 62.6
BcaC04g18720 Brassica carinata HOM05D006263 ORTHO05D007549 1.0e-122 444.1 336 63.1
arahy.Tifrunner.gnm1.ann1.NGU2DL Arachis hypogaea HOM05D006263 ORTHO05D007549 1.3e-122 443.7 349 63.0
BraA10t44195Z Brassica rapa HOM05D006263 ORTHO05D007549 1.8e-122 443.4 335 63.0
Psat1g096040 Pisum sativum HOM05D006263 ORTHO05D007549 1.8e-122 443.4 343 62.7
A10p21320 Brassica napus HOM05D006263 ORTHO05D007549 2.3e-122 443.0 335 63.3
ClCG05G001960 Citrullus lanatus HOM05D006263 ORTHO05D007549 2.3e-122 443.0 341 61.3
Duzib177G1028 Durio zibethinus HOM05D006263 ORTHO05D007549 2.3e-122 443.0 343 63.6
Cc06_g22910 Coffea canephora HOM05D006263 ORTHO05D007549 3.0e-122 442.6 335 62.1
TAR623G0038 Trochodendron aralioides HOM05D006263 ORTHO05D007549 3.9e-122 442.2 340 63.5
Manes.09G141600 Manihot esculenta HOM05D006263 ORTHO05D007549 5.1e-122 441.8 348 61.8
Potri.006G233200 Populus trichocarpa HOM05D006263 ORTHO05D007549 8.7e-122 441.0 349 61.0
Migut.B01469 Erythranthe guttata HOM05D006263 ORTHO05D007549 1.1e-121 440.7 333 61.3
PSO384G1918 Papaver somniferum HOM05D006263 ORTHO05D007549 1.5e-121 440.3 338 63.9
Sabra19G0044500 Salix brachista HOM05D006263 ORTHO05D007549 1.5e-121 440.3 339 61.7
Thhalv10013996m.g Eutrema salsugineum HOM05D006263 ORTHO05D007549 1.9e-121 439.9 335 61.5
SGA_v2.0_scaffold145G36025 Striga asiatica HOM05D006263 ORTHO05D007549 1.9e-121 439.9 339 60.5
Eucgr.L01413 Eucalyptus grandis HOM05D006263 ORTHO05D007549 3.3e-121 439.1 337 62.9
MELO3C006156.2 Cucumis melo HOM05D006263 ORTHO05D007549 4.3e-121 438.7 340 60.9
HanXRQChr01g0024721 Helianthus annuus HOM05D006263 ORTHO05D007549 4.3e-121 438.7 344 59.6
Eucgr.K02258 Eucalyptus grandis HOM05D006263 ORTHO05D007549 9.7e-121 437.6 337 62.6
FAN23G2537 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.3e-120 437.2 338 63.3
AL6G29400 Arabidopsis lyrata HOM05D006263 ORTHO05D007549 1.6e-120 436.8 335 62.4
FvH4_1g28080 Fragaria vesca HOM05D006263 ORTHO05D007549 2.8e-120 436.0 338 63.0
FAN19G0970 Fragaria x ananassa HOM05D006263 ORTHO05D007549 6.3e-120 434.9 338 62.7
Ca_04490_v3 Cicer arietinum L. HOM05D006263 ORTHO05D007549 8.2e-120 434.5 345 61.2
CARHR194860 Cardamine hirsuta HOM05D006263 ORTHO05D007549 1.4e-119 433.7 341 61.0
FAN28G0550 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.4e-119 433.7 337 63.2
CDE02G1162 Ceratophyllum demersum HOM05D006263 ORTHO05D007549 2.4e-119 433.0 342 61.1
ECA285G0004 Erigeron canadensis HOM05D006263 ORTHO05D007549 6.9e-119 431.4 339 60.8
FAN26G0246 Fragaria x ananassa HOM05D006263 ORTHO05D007549 3.4e-118 429.1 338 62.4
Sc18g0007080 Simmondsia chinensis HOM05D006263 ORTHO05D007549 3.4e-118 429.1 340 63.8
unitig_26.g9717 Utricularia gibba HOM05D006263 ORTHO05D007549 5.9e-118 428.3 336 59.5
RcHm_v2.0_Chr3g0497171 Rosa chinensis HOM05D006263 ORTHO05D007549 7.6e-118 427.9 341 61.6
CANSAT78G2484 Cannabis sativa HOM05D006263 ORTHO05D007549 1.3e-117 427.2 346 61.6
FAN28G1368 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.7e-117 426.8 338 61.8
Lsat_1_v5_gn_1_59641 Lactuca sativa HOM05D006263 ORTHO05D007549 1.9e-116 423.3 341 59.8
Sabra19G0042300 Salix brachista HOM05D006263 ORTHO05D007549 1.2e-115 420.6 385 54.5
HPP92_015639 Vanilla planifolia HOM05D006263 ORTHO05D007549 1.2e-115 420.6 339 57.5
ATR0697G038 Amborella trichopoda HOM05D006263 ORTHO05D007549 8.8e-114 414.5 373 58.2
Aa31LG11G11400 Aethionema arabicum HOM05D006263 ORTHO05D007549 2.5e-113 412.9 369 55.6
Peaxi162Scf00076g01055 Petunia axillaris HOM05D006263 ORTHO05D007549 2.5e-113 412.9 340 60.6
TAR369G0989 Trochodendron aralioides HOM05D006263 ORTHO05D007549 1.3e-112 410.6 343 60.6
Zm00001eb301000 Zea mays HOM05D006263 ORTHO05D007549 6.9e-111 404.8 343 57.1
SalBow5G0264 Salvia bowleyana HOM05D006263 ORTHO05D007549 4.5e-110 402.1 337 56.7
Ca_04491_v3 Cicer arietinum L. HOM05D006263 ORTHO05D000429 4.2e-108 395.6 343 56.0
vmacro09144 Vaccinium macrocarpon HOM05D006263 ORTHO05D007549 5.5e-108 395.2 339 59.0
Cpa.g.sc51.112 Carica papaya HOM05D006263 ORTHO05D007549 3.3e-105 386.0 347 58.8
Psat1g096000 Pisum sativum HOM05D006263 ORTHO05D007549 7.4e-105 384.8 335 56.7
TPR.G34629 Trifolium pratense HOM05D006263 ORTHO05D007549 1.7e-104 383.6 334 55.4
Actinidia17306 Actinidia chinensis HOM05D000412 ORTHO05D000429 4.5e-102 375.6 289 62.6
Medtr6g029530 Medicago truncatula HOM05D006263 ORTHO05D007549 1.6e-99 367.1 334 53.0
SEGI_37923 Sequoiadendron giganteum HOM05D006263 ORTHO05D007549 1.4e-95 354.0 337 53.4
MBI11_g31289_MAGBIO Magnolia biondii HOM05D006263 ORTHO05D007549 3.1e-95 352.8 356 53.1
Oeu003888.1 Olea europaea HOM05D006263 ORTHO05D007549 2.6e-94 349.7 263 62.0
CsaV3_3G009370 Cucumis sativus L. HOM05D006263 ORTHO05D007549 6.5e-85 318.5 253 59.7
Sed0020840 Sechium edule HOM05D006263 ORTHO05D007549 5.5e-84 315.5 255 59.2
Os07g0171200 Oryza sativa ssp. japonica HOM05D006263 ORTHO05D007549 1.0e-82 311.2 241 60.2
Eucgr.A02096 Eucalyptus grandis HOM05D006263 ORTHO05D007549 6.8e-82 308.5 288 55.9
Mapoly0103s0062 Marchantia polymorpha HOM05D006263 ORTHO05D007549 2.3e-77 293.5 342 44.2
Hma1.2p1_0376F.1_g139140 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.2e-72 276.9 183 70.5
Hma1.2p1_0376F.1_g139150 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 2.2e-72 276.9 183 70.5
Pp3c17_20460 Physcomitrium patens HOM05D006263 ORTHO05D007549 2.4e-71 273.5 342 40.6
SMO367G0539 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 2.4e-63 246.9 336 39.6
FAN16G0439 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.1e-59 233.8 209 56.9
RhsimUnG0048700 Rhododendron simsii HOM05D006263 ORTHO05D007549 2.9e-48 196.8 179 59.8
FAN18G1683 Fragaria x ananassa HOM05D000349 ORTHO05D007549 3.5e-46 189.9 203 51.2
Pp3c2_1350 Physcomitrium patens HOM05D006263 ORTHO05D007549 2.3e-45 187.2 263 38.0
FAN06G4136 Fragaria x ananassa HOM05D000349 ORTHO05D007549 4.3e-44 183.0 189 51.9
Hma1.2p1_0376F.1_g139120 Hydrangea macrophylla HOM05D006263 ORTHO05D007549 3.1e-42 176.8 167 55.7
FAN18G1526 Fragaria x ananassa HOM05D000349 ORTHO05D007549 1.7e-40 171.0 181 51.9
FAN24G0044 Fragaria x ananassa HOM05D006263 ORTHO05D007549 1.8e-34 151.0 215 41.4
TPR.G18346 Trifolium pratense HOM05D006263 ORTHO05D007549 1.9e-23 114.4 81 66.7
SMO275G0019 Selaginella moellendorffii HOM05D006263 ORTHO05D007549 1.8e-18 97.8 129 38.8
SMO367G0580 Selaginella moellendorffii HOM05D006263 ORTHO05D378923 1.1e-15 88.6 128 36.7
FAN25G1138 Fragaria x ananassa HOM05D012843 ORTHO05D017973 1.2e-14 85.1 77 57.1
FAN03G3217 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.6e-14 84.7 60 65.0
FAN11G1140 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.6e-14 84.7 60 65.0
FAN22G0360 Fragaria x ananassa HOM05D002676 ORTHO05D003194 1.6e-14 84.7 60 65.0
FAN15G0659 Fragaria x ananassa HOM05D006263 ORTHO05D007549 2.7e-14 84.0 127 40.2
FAN12G3135 Fragaria x ananassa HOM05D000005 ORTHO05D000294 4.6e-14 83.2 77 55.8
FAN22G0951 Fragaria x ananassa HOM05D000005 ORTHO05D000294 1.0e-13 82.0 77 55.8
FAN22G1437 Fragaria x ananassa HOM05D002676 ORTHO05D007549 1.3e-13 81.6 60 63.3
FAN09G2057 Fragaria x ananassa HOM05D000005 ORTHO05D000294 3.3e-12 77.0 57 63.2
FAN08G1181 Fragaria x ananassa HOM05D003914 ORTHO05D001189 5.3e-10 69.7 53 60.4
FAN27G3525 Fragaria x ananassa HOM05D003914 ORTHO05D001189 5.3e-10 69.7 53 60.4
Phvul.004G082000 Phaseolus vulgaris HOM05D006263 ORTHO05D007549 1.5e-09 68.2 60 53.3
FAN22G2156 Fragaria x ananassa HOM05D002676 ORTHO05D003194 2.5e-07 60.8 69 46.4


User provided reference genes

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