Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62027101 Chenopodium quinoa HOM05D004022 ORTHO05D004090 1.7e-73 279.3 139 100.0
EL10Ac9g22063 Beta vulgaris HOM05D004022 ORTHO05D004090 1.3e-46 189.9 140 76.4
AUR62012877 Chenopodium quinoa HOM05D004022 ORTHO05D004090 4.7e-44 181.4 139 73.4
Sc03g0007740 Simmondsia chinensis HOM05D004022 ORTHO05D004090 3.0e-14 82.4 144 38.9
Thecc.07G146700 Theobroma cacao HOM05D004022 ORTHO05D004090 3.9e-14 82.0 124 43.5
Duzib213G0178 Durio zibethinus HOM05D004022 ORTHO05D004090 6.6e-14 81.3 124 44.4
Gohir.D01G029300 Gossypium hirsutum HOM05D004022 ORTHO05D004090 5.6e-13 78.2 124 41.9
Gorai.002G038600 Gossypium raimondii HOM05D004022 ORTHO05D004090 5.6e-13 78.2 124 41.9
BolC6t40255H Brassica oleracea HOM05D004022 ORTHO05D004090 6.2e-12 74.7 137 36.5
QL04p070411 Quercus lobata HOM05D004022 ORTHO05D004090 8.1e-12 74.3 125 38.4
QL04p070436 Quercus lobata HOM05D004022 ORTHO05D004090 1.4e-11 73.6 125 38.4
AL2G38780 Arabidopsis lyrata HOM05D004022 ORTHO05D004090 2.4e-11 72.8 137 38.0
Thecc.06G149800 Theobroma cacao HOM05D004022 ORTHO05D004090 3.1e-11 72.4 132 34.8
CSS0036966 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 4.0e-11 72.0 126 36.5
Glyma.15G249800 Glycine max HOM05D004022 ORTHO05D004090 5.3e-11 71.6 131 38.9
Dinv32245 Davidia involucrata HOM05D004022 ORTHO05D004090 6.9e-11 71.2 133 40.6
Gohir.D10G042200 Gossypium hirsutum HOM05D004022 ORTHO05D004090 6.9e-11 71.2 126 38.1
Gorai.011G044800 Gossypium raimondii HOM05D004022 ORTHO05D004090 6.9e-11 71.2 126 38.1
Prupe.4G149000 Prunus persica HOM05D004022 ORTHO05D004090 6.9e-11 71.2 137 38.7
Glyma.08G176500 Glycine max HOM05D004022 ORTHO05D004090 9.0e-11 70.9 131 39.7
TAR627G0510 Trochodendron aralioides HOM05D004022 ORTHO05D004090 9.0e-11 70.9 123 40.7
Haze_08493 Corylus avellana HOM05D004022 ORTHO05D004090 2.0e-10 69.7 121 40.5
QL05p057789 Quercus lobata HOM05D004022 ORTHO05D004090 2.0e-10 69.7 122 39.3
CiPaw.10G091400 Carya illinoinensis HOM05D004022 ORTHO05D004090 2.6e-10 69.3 121 37.2
Gohir.A10G041400 Gossypium hirsutum HOM05D004022 ORTHO05D004090 2.6e-10 69.3 126 37.3
QL04p070376 Quercus lobata HOM05D004022 ORTHO05D004090 2.6e-10 69.3 125 38.4
Sopen07g029950 Solanum pennellii HOM05D004022 ORTHO05D004090 2.6e-10 69.3 128 40.6
Lalb_Chr25g0285381 Lupinus albus HOM05D004022 ORTHO05D004090 3.4e-10 68.9 125 42.4
BcaC08g45417 Brassica carinata HOM05D004022 ORTHO05D004090 4.4e-10 68.6 137 36.5
C06p30490 Brassica napus HOM05D004022 ORTHO05D004090 4.4e-10 68.6 137 36.5
BolC6t38212H Brassica oleracea HOM05D004022 ORTHO05D004090 4.4e-10 68.6 137 36.5
COL.COLO4_17416 Corchorus olitorius HOM05D004022 ORTHO05D004090 4.4e-10 68.6 131 36.6
ECA236G3547 Erigeron canadensis HOM05D004022 ORTHO05D004090 4.4e-10 68.6 131 35.1
Phvul.005G051400 Phaseolus vulgaris HOM05D004022 ORTHO05D004090 4.4e-10 68.6 131 38.2
COL.COLO4_31065 Corchorus olitorius HOM05D004022 ORTHO05D004090 5.8e-10 68.2 132 37.1
Duzib235G0028 Durio zibethinus HOM05D004022 ORTHO05D004090 5.8e-10 68.2 134 34.3
CAN.G1003.7 Capsicum annuum HOM05D004022 ORTHO05D004090 7.6e-10 67.8 125 38.4
FAN25G3340 Fragaria x ananassa HOM05D004022 ORTHO05D004090 7.6e-10 67.8 136 33.8
Duzib268G0389 Durio zibethinus HOM05D004022 ORTHO05D004090 9.9e-10 67.4 123 42.3
Solyc07g056600.1 Solanum lycopersicum HOM05D004022 ORTHO05D004090 9.9e-10 67.4 128 38.3
A07p27550 Brassica napus HOM05D004022 ORTHO05D004090 1.3e-09 67.0 137 35.0
BraA07t30397Z Brassica rapa HOM05D004022 ORTHO05D004090 1.3e-09 67.0 137 35.0
BraA07t31879Z Brassica rapa HOM05D004022 ORTHO05D004090 1.3e-09 67.0 137 35.0
Potri.011G095900 Populus trichocarpa HOM05D004022 ORTHO05D004090 1.3e-09 67.0 134 38.8
RcHm_v2.0_Chr5g0027761 Rosa chinensis HOM05D004022 ORTHO05D004090 1.7e-09 66.6 132 36.4
CSS0046120 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 2.2e-09 66.2 127 38.6
Peaxi162Scf00111g00083 Petunia axillaris HOM05D004022 ORTHO05D004090 2.2e-09 66.2 131 37.4
FAN16G3013 Fragaria x ananassa HOM05D004022 ORTHO05D004090 2.9e-09 65.9 136 34.6
FAN21G1087 Fragaria x ananassa HOM05D004022 ORTHO05D004090 2.9e-09 65.9 136 34.6
PGSC0003DMG400027649 Solanum tuberosum HOM05D004022 ORTHO05D004090 2.9e-09 65.9 127 37.8
A07p43670 Brassica napus HOM05D004022 ORTHO05D004090 3.8e-09 65.5 137 35.0
BcaC08g47415 Brassica carinata HOM05D004022 ORTHO05D004090 4.9e-09 65.1 137 35.0
Actinidia35177 Actinidia chinensis HOM05D004022 ORTHO05D004090 6.4e-09 64.7 127 33.1
PGR083G0572 Punica granatum HOM05D004022 ORTHO05D004090 6.4e-09 64.7 124 37.1
BcaB05g25138 Brassica carinata HOM05D004022 ORTHO05D004090 8.4e-09 64.3 138 35.5
Ca_03390_v3 Cicer arietinum L. HOM05D004022 ORTHO05D004090 8.4e-09 64.3 122 37.7
THA.LOC104813977 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 8.4e-09 64.3 136 35.3
Lalb_Chr13g0293851 Lupinus albus HOM05D012904 ORTHO05D004090 1.1e-08 63.9 120 39.2
Cpa.g.sc2579.1 Carica papaya HOM05D004022 ORTHO05D004090 1.4e-08 63.5 124 37.9
Duzib192G0777 Durio zibethinus HOM05D004022 ORTHO05D004090 1.4e-08 63.5 133 33.1
Potri.001G378300 Populus trichocarpa HOM05D004022 ORTHO05D004090 1.4e-08 63.5 128 33.6
TWI38G0355 Tripterygium wilfordii HOM05D004022 ORTHO05D004090 1.4e-08 63.5 132 40.2
C02p35580 Brassica napus HOM05D004022 ORTHO05D004090 1.9e-08 63.2 137 34.3
CiPaw.09G122900 Carya illinoinensis HOM05D004022 ORTHO05D004090 1.9e-08 63.2 123 33.3
FAN11G3697 Fragaria x ananassa HOM05D004022 ORTHO05D004090 1.9e-08 63.2 136 33.8
Gohir.A04G046900 Gossypium hirsutum HOM05D004022 ORTHO05D004090 1.9e-08 63.2 124 37.1
BcaB02g07170 Brassica carinata HOM05D004022 ORTHO05D004090 2.4e-08 62.8 137 37.2
BcaC03g15811 Brassica carinata HOM05D004022 ORTHO05D004090 2.4e-08 62.8 137 34.3
A02p22170 Brassica napus HOM05D004022 ORTHO05D004090 2.4e-08 62.8 137 34.3
BraA02t07221Z Brassica rapa HOM05D004022 ORTHO05D004090 2.4e-08 62.8 137 34.3
Lj3g0019101 Lotus japonicus HOM05D004022 ORTHO05D004090 2.4e-08 62.8 130 36.2
Cfa019453 Carpinus fangiana HOM05D004022 ORTHO05D004090 3.2e-08 62.4 123 38.2
Migut.M00648 Erythranthe guttata HOM05D004022 ORTHO05D004090 3.2e-08 62.4 128 35.9
HanXRQChr15g0492271 Helianthus annuus HOM05D004022 ORTHO05D004090 3.2e-08 62.4 133 33.8
Eucgr.F01407 Eucalyptus grandis HOM05D004022 ORTHO05D004090 4.2e-08 62.0 135 36.3
Peaxi162Scf00035g00165 Petunia axillaris HOM05D004022 ORTHO05D004090 4.2e-08 62.0 136 33.1
BolC2t09573H Brassica oleracea HOM05D004022 ORTHO05D004090 5.4e-08 61.6 135 34.1
Duzib160G0057 Durio zibethinus HOM05D004022 ORTHO05D004090 5.4e-08 61.6 131 34.4
Sabra16G0249100 Salix brachista HOM05D004022 ORTHO05D004090 5.4e-08 61.6 128 34.4
Sp5g33510 Schrenkiella parvula HOM05D004022 ORTHO05D004090 5.4e-08 61.6 137 35.0
Haze_05605 Corylus avellana HOM05D004022 ORTHO05D004090 7.1e-08 61.2 123 35.0
Eucgr.F01408 Eucalyptus grandis HOM05D004022 ORTHO05D004090 7.1e-08 61.2 71 50.7
Migut.M00652 Erythranthe guttata HOM05D004022 ORTHO05D004090 9.3e-08 60.8 132 37.1
Thhalv10019550m.g Eutrema salsugineum HOM05D004022 ORTHO05D004090 9.3e-08 60.8 137 33.6
Lsat_1_v5_gn_7_101361 Lactuca sativa HOM05D004022 ORTHO05D004090 1.6e-07 60.1 134 33.6
THA.LOC104812289 Tarenaya hassleriana HOM05D004022 ORTHO05D004090 1.6e-07 60.1 48 66.7
Nitab4.5_0001924g0010 Nicotiana tabacum HOM05D004022 ORTHO05D004090 2.1e-07 59.7 133 36.8
arahy.Tifrunner.gnm1.ann1.I20P02 Arachis hypogaea HOM05D004022 ORTHO05D004090 2.7e-07 59.3 122 34.4
BcaB03g16016 Brassica carinata HOM05D004022 ORTHO05D004090 2.7e-07 59.3 50 62.0
RhsimUnG0204300 Rhododendron simsii HOM05D004022 ORTHO05D004090 2.7e-07 59.3 43 67.4
Carub.0002s2531 Capsella rubella HOM05D004022 ORTHO05D004090 3.5e-07 58.9 50 62.0
Migut.M00647 Erythranthe guttata HOM05D004022 ORTHO05D004090 3.5e-07 58.9 125 36.0
Aa31LG7G1990 Aethionema arabicum HOM05D004022 ORTHO05D004090 4.6e-07 58.5 134 35.1
C06p52350 Brassica napus HOM05D004022 ORTHO05D004090 4.6e-07 58.5 50 62.0
CARHR071930 Cardamine hirsuta HOM05D004022 ORTHO05D004090 4.6e-07 58.5 137 32.8
Rhsim06G0184700 Rhododendron simsii HOM05D004022 ORTHO05D004090 4.6e-07 58.5 132 31.1
TPR.G26630 Trifolium pratense HOM05D004022 ORTHO05D004090 4.6e-07 58.5 127 33.1
Manes.17G070600 Manihot esculenta HOM05D004022 ORTHO05D004090 6.0e-07 58.2 132 31.8
Nitab4.5_0005080g0020 Nicotiana tabacum HOM05D004022 ORTHO05D004090 6.0e-07 58.2 132 36.4
Psat1g188880 Pisum sativum HOM05D012904 ORTHO05D004090 6.0e-07 58.2 117 32.5
Nn3g20789 Nelumbo nucifera HOM05D004022 ORTHO05D004090 1.0e-06 57.4 125 35.2
Nn3g20790 Nelumbo nucifera HOM05D004022 ORTHO05D004090 1.0e-06 57.4 125 35.2
SalBow8G0217 Salvia bowleyana HOM05D004022 ORTHO05D004090 1.0e-06 57.4 132 34.1
AT1G78410 Arabidopsis thaliana HOM05D004022 ORTHO05D004090 1.3e-06 57.0 50 60.0
Gorai.009G154700 Gossypium raimondii HOM05D004022 ORTHO05D004090 1.3e-06 57.0 130 31.5
arahy.Tifrunner.gnm1.ann1.NFB54Z Arachis hypogaea HOM05D004022 ORTHO05D004090 1.7e-06 56.6 122 33.6
Gohir.D05G150601 Gossypium hirsutum HOM05D004022 ORTHO05D004090 1.7e-06 56.6 130 31.5
SalBow8G5432 Salvia bowleyana HOM05D004022 ORTHO05D004090 1.7e-06 56.6 134 32.8
DCAR_021057 Daucus carota HOM05D004022 ORTHO05D004090 3.0e-06 55.8 139 33.1
Gohir.A05G148100 Gossypium hirsutum HOM05D004022 ORTHO05D004090 3.0e-06 55.8 130 31.5
Lsat_1_v5_gn_7_101401 Lactuca sativa HOM05D004022 ORTHO05D004090 3.0e-06 55.8 134 31.3
Aa31LG4G2550 Aethionema arabicum HOM05D004022 ORTHO05D004090 3.9e-06 55.5 73 46.6
Migut.M00651 Erythranthe guttata HOM05D004022 ORTHO05D004090 5.1e-06 55.1 120 36.7
TPR.G2234 Trifolium pratense HOM05D004022 ORTHO05D004090 5.1e-06 55.1 127 32.3
Medtr2g070550 Medicago truncatula HOM05D004022 ORTHO05D004090 6.6e-06 54.7 40 72.5
CSS0009778 Camellia sinensis var. sinensis HOM05D004022 ORTHO05D004090 8.7e-06 54.3 126 35.7


User provided reference genes

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