Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 7.7e-68 260.4 134 100.0
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 5.9e-60 234.2 134 91.0
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 5.7e-55 217.6 134 82.1
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 3.7e-54 214.9 134 81.3
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 3.7e-54 214.9 171 70.8
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 1.1e-53 213.4 134 80.6
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 1.1e-53 213.4 134 80.6
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.0e-52 209.1 131 80.2
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 8.8e-48 193.7 134 73.1
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 8.3e-46 187.2 134 69.4
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 1.4e-45 186.4 134 70.1
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 1.8e-45 186.0 134 67.9
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 2.4e-45 185.7 134 69.4
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 4.1e-45 184.9 134 69.4
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 7.0e-45 184.1 134 70.1
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 9.1e-45 183.7 134 70.1
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 1.2e-44 183.3 134 67.9
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 1.6e-44 183.0 134 67.9
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 1.6e-44 183.0 134 69.4
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 2.0e-44 182.6 134 69.4
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 2.0e-44 182.6 134 70.1
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 7.7e-44 180.6 134 67.2
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 2.9e-43 178.7 133 66.2
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 6.6e-43 177.6 134 66.4
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.9e-42 176.0 134 65.7
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 1.9e-42 176.0 134 65.7
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 2.5e-42 175.6 134 65.7
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 3.3e-42 175.3 134 66.4
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 3.3e-42 175.3 134 64.2
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 3.3e-42 175.3 134 64.9
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 4.2e-42 174.9 134 64.2
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 5.6e-42 174.5 134 64.2
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 5.6e-42 174.5 134 64.9
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 5.6e-42 174.5 134 64.9
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 5.6e-42 174.5 134 63.4
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 5.6e-42 174.5 134 64.2
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 5.6e-42 174.5 134 64.2
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 7.2e-42 174.1 134 66.4
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 7.2e-42 174.1 134 65.7
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 9.5e-42 173.7 134 62.7
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 9.5e-42 173.7 131 64.9
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 9.5e-42 173.7 134 63.4
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 9.5e-42 173.7 135 65.9
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.6e-41 172.9 134 64.2
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 2.1e-41 172.6 131 64.9
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 2.1e-41 172.6 134 61.9
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 2.8e-41 172.2 134 65.7
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 2.8e-41 172.2 134 61.2
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 2.8e-41 172.2 134 64.2
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 6.1e-41 171.0 131 64.1
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 6.1e-41 171.0 134 62.7
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 8.0e-41 170.6 135 64.4
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 1.4e-40 169.9 134 62.7
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 2.3e-40 169.1 134 61.9
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 4.0e-40 168.3 130 65.4
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 5.2e-40 167.9 135 63.0
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 5.2e-40 167.9 134 61.9
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 8.9e-40 167.2 134 63.4
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 8.9e-40 167.2 134 63.4
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 8.9e-40 167.2 131 61.8
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 1.2e-39 166.8 135 63.0
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 1.2e-39 166.8 131 61.8
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 2.0e-39 166.0 135 64.4
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 2.6e-39 165.6 134 59.0
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 2.6e-39 165.6 134 62.7
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 3.4e-39 165.2 131 64.1
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 4.4e-39 164.9 134 64.9
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 4.4e-39 164.9 134 64.9
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 4.4e-39 164.9 134 57.5
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 4.4e-39 164.9 134 64.9
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 5.7e-39 164.5 134 64.2
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 7.5e-39 164.1 135 63.0
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 7.5e-39 164.1 135 63.0
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 7.5e-39 164.1 135 63.0
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 7.5e-39 164.1 135 63.0
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 2.9e-38 162.2 135 62.2
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 3.7e-38 161.8 134 60.4
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 3.7e-38 161.8 134 59.7
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 8.3e-38 160.6 135 61.5
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 8.3e-38 160.6 134 59.7
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 1.1e-37 160.2 134 61.9
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.1e-37 160.2 134 61.2
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.1e-37 160.2 135 62.2
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.4e-37 159.8 131 60.3
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 1.8e-37 159.5 135 61.5
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 2.4e-37 159.1 132 59.8
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 4.1e-37 158.3 134 60.4
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 4.1e-37 158.3 134 60.4
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 4.1e-37 158.3 134 61.2
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 9.2e-37 157.1 151 58.3
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 3.5e-36 155.2 134 58.2
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 7.8e-36 154.1 134 54.5
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 1.0e-35 153.7 135 57.8
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 1.7e-35 152.9 135 57.0
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 3.9e-35 151.8 134 56.0
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 8.6e-35 150.6 134 55.2
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 8.6e-35 150.6 134 57.5
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 1.1e-34 150.2 120 63.3
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 1.5e-34 149.8 136 59.6
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.5e-34 149.8 135 56.3
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 1.9e-34 149.4 135 56.3
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 1.9e-34 149.4 90 85.6
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 1.9e-34 149.4 138 57.2
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 3.3e-34 148.7 134 56.7
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 4.3e-34 148.3 125 64.8
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 4.3e-34 148.3 125 64.8
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 5.6e-34 147.9 134 54.5
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 2.1e-33 146.0 134 57.5
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 3.6e-33 145.2 134 57.5
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 1.4e-32 143.3 134 54.5
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 3.1e-32 142.1 134 54.5
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 4.0e-32 141.7 132 55.3
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 5.2e-32 141.4 134 57.5
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 5.2e-32 141.4 134 53.0
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 4.4e-31 138.3 136 52.9
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 5.8e-31 137.9 105 63.8
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 1.3e-30 136.7 134 54.5
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.4e-29 133.3 108 60.2
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 4.1e-29 131.7 136 53.7
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 9.2e-29 130.6 136 52.2
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.2e-28 130.2 102 68.6
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.7e-28 129.0 105 60.0
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.3e-27 125.9 107 57.9
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.3e-27 125.9 107 57.9
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 5.0e-27 124.8 102 60.8
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 8.6e-27 124.0 131 51.1
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 8.6e-27 124.0 152 45.4
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.3e-24 115.9 91 62.6
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 2.3e-24 115.9 105 55.2
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 1.5e-23 113.2 110 50.9
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 5.8e-23 111.3 137 46.7
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 5.8e-23 111.3 125 43.2
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 2.1e-20 102.8 84 57.1
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 4.3e-18 95.1 135 39.3
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 4.3e-18 95.1 105 45.7
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 2.0e-15 86.3 88 52.3
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 9.2e-13 77.4 83 53.0
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 2.7e-12 75.9 107 40.2
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 3.5e-12 75.5 100 46.0
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 1.7e-11 73.2 132 31.8
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 6.6e-11 71.2 136 33.1
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 2.8e-09 65.9 134 29.9
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 4.9e-06 55.1 57 47.4


User provided reference genes

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