Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026764 Chenopodium quinoa HOM05D007108 ORTHO05D009128 7.6e-135 483.8 237 100.0
AUR62013508 Chenopodium quinoa HOM05D007108 ORTHO05D009128 1.7e-102 376.3 244 81.1
EL10Ac1g01484 Beta vulgaris HOM05D007108 ORTHO05D009128 2.9e-86 322.4 250 69.6
Sopen04g026870 Solanum pennellii HOM05D007108 ORTHO05D009128 1.3e-81 307.0 250 65.2
Eucgr.F02729 Eucalyptus grandis HOM05D007108 ORTHO05D009128 2.8e-81 305.8 259 61.8
Peaxi162Scf00263g00613 Petunia axillaris HOM05D007108 ORTHO05D009128 4.8e-81 305.1 199 74.9
GSVIVG01010051001 Vitis vinifera HOM05D007108 ORTHO05D009128 4.8e-81 305.1 241 65.1
Actinidia29517 Actinidia chinensis HOM05D007108 ORTHO05D009128 8.2e-81 304.3 199 75.9
Solyc04g064930.3 Solanum lycopersicum HOM05D007108 ORTHO05D009128 1.4e-80 303.5 204 73.5
TAR628G0410 Trochodendron aralioides HOM05D007108 ORTHO05D009128 1.4e-80 303.5 259 64.1
Gohir.A05G242100 Gossypium hirsutum HOM05D007108 ORTHO05D009128 1.8e-80 303.1 240 66.2
Dinv41114 Davidia involucrata HOM05D007108 ORTHO05D009128 4.1e-80 302.0 185 79.5
Gorai.009G252700 Gossypium raimondii HOM05D007108 ORTHO05D009128 4.1e-80 302.0 236 66.5
TWI34G1539 Tripterygium wilfordii HOM05D007108 ORTHO05D009128 4.1e-80 302.0 253 62.8
MSTRG.1369 Avicennia marina HOM05D007108 ORTHO05D009128 5.3e-80 301.6 211 70.6
CSS0020358 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 5.3e-80 301.6 202 71.3
Ciclev10002261m.g Citrus clementina HOM05D007108 ORTHO05D009128 7.0e-80 301.2 229 66.4
VMungo1309G2491 Vigna mungo HOM05D007108 ORTHO05D009128 7.0e-80 301.2 199 74.4
ClCG09G009870 Citrullus lanatus HOM05D007108 ORTHO05D009128 9.1e-80 300.8 204 72.5
Lj1g0003350 Lotus japonicus HOM05D007108 ORTHO05D009128 1.2e-79 300.4 246 63.8
CAN.G1564.2 Capsicum annuum HOM05D007108 ORTHO05D009128 2.0e-79 299.7 209 71.3
Manes.18G088801 Manihot esculenta HOM05D007108 ORTHO05D009128 2.0e-79 299.7 242 65.7
Thecc.08G146100 Theobroma cacao HOM05D007108 ORTHO05D009128 2.0e-79 299.7 195 75.4
Aa31LG7G5350 Aethionema arabicum HOM05D007108 ORTHO05D009128 2.6e-79 299.3 206 71.8
CsaV3_7G024840 Cucumis sativus L. HOM05D007108 ORTHO05D009128 2.6e-79 299.3 209 70.3
Gohir.D05G243400 Gossypium hirsutum HOM05D007108 ORTHO05D009128 2.6e-79 299.3 253 63.2
Aqoxy5G02215 Aquilegia oxysepala HOM05D007108 ORTHO05D009128 3.5e-79 298.9 224 67.4
CSS0038886 Camellia sinensis var. sinensis HOM05D007108 ORTHO05D009128 3.5e-79 298.9 202 71.3
CANSAT25G1119 Cannabis sativa HOM05D007108 ORTHO05D009128 3.5e-79 298.9 244 64.8
Glyma.04G239800 Glycine max HOM05D007108 ORTHO05D009128 4.5e-79 298.5 250 62.4
vmacro13384 Vaccinium macrocarpon HOM05D007108 ORTHO05D009128 4.5e-79 298.5 203 72.4
Glyma.06G124100 Glycine max HOM05D007108 ORTHO05D009128 7.7e-79 297.7 245 63.3
PSO782G4411 Papaver somniferum HOM05D007108 ORTHO05D009128 7.7e-79 297.7 244 66.0
Duzib116G0089 Durio zibethinus HOM05D007108 ORTHO05D009128 1.0e-78 297.4 198 73.7
Atru.chr13.2257 Acer truncatum HOM05D007108 ORTHO05D009128 1.7e-78 296.6 231 64.9
PSO063G1249 Papaver somniferum HOM05D007108 ORTHO05D009128 1.7e-78 296.6 242 65.3
CARHR021740 Cardamine hirsuta HOM05D007108 ORTHO05D009128 2.2e-78 296.2 208 69.2
Phvul.009G136100 Phaseolus vulgaris HOM05D007108 ORTHO05D009128 2.9e-78 295.8 218 66.5
Rhsim07G0025600 Rhododendron simsii HOM05D007108 ORTHO05D009128 2.9e-78 295.8 253 60.5
Potri.002G071000 Populus trichocarpa HOM05D007108 ORTHO05D009128 6.5e-78 294.7 202 71.3
Thhalv10008558m.g Eutrema salsugineum HOM05D007108 ORTHO05D009128 8.5e-78 294.3 229 65.1
Sed0009335 Sechium edule HOM05D007108 ORTHO05D009128 8.5e-78 294.3 197 72.6
BraA06t24837Z Brassica rapa HOM05D007108 ORTHO05D009128 1.1e-77 293.9 203 70.0
Ca_16662_v3 Cicer arietinum L. HOM05D007108 ORTHO05D009128 1.1e-77 293.9 201 72.6
Cc10_g14220 Coffea canephora HOM05D007108 ORTHO05D009128 1.5e-77 293.5 235 64.3
FvH4_2g14420 Fragaria vesca HOM05D007108 ORTHO05D009128 1.5e-77 293.5 234 63.7
Nn5g28655 Nelumbo nucifera HOM05D007108 ORTHO05D009128 1.5e-77 293.5 232 65.1
BcaC05g26041 Brassica carinata HOM05D007108 ORTHO05D009128 1.9e-77 293.1 199 71.4
Carub.0001s2075 Capsella rubella HOM05D007108 ORTHO05D009128 1.9e-77 293.1 208 67.8
Prupe.8G021900 Prunus persica HOM05D007108 ORTHO05D009128 1.9e-77 293.1 202 70.8
Sc02g0004350 Simmondsia chinensis HOM05D007108 ORTHO05D009128 1.9e-77 293.1 242 63.6
A06p17400 Brassica napus HOM05D007108 ORTHO05D009128 3.2e-77 292.4 230 64.8
THA.LOC104812052 Tarenaya hassleriana HOM05D007108 ORTHO05D009128 3.2e-77 292.4 208 69.2
Migut.C01030 Erythranthe guttata HOM05D007108 ORTHO05D009128 4.2e-77 292.0 200 71.5
Lalb_Chr11g0066481 Lupinus albus HOM05D007108 ORTHO05D009128 7.2e-77 291.2 218 67.9
BolC5t30716H Brassica oleracea HOM05D007108 ORTHO05D009128 1.2e-76 290.4 199 70.9
CDE08G0865 Ceratophyllum demersum HOM05D007108 ORTHO05D009128 1.6e-76 290.0 259 57.9
AT1G21350 Arabidopsis thaliana HOM05D007108 ORTHO05D009128 2.1e-76 289.7 203 70.0
BcaB07g32123 Brassica carinata HOM05D007108 ORTHO05D009128 2.1e-76 289.7 199 70.4
DCAR_010274 Daucus carota HOM05D007108 ORTHO05D009128 2.1e-76 289.7 222 66.2
RcHm_v2.0_Chr6g0276751 Rosa chinensis HOM05D007108 ORTHO05D009128 2.1e-76 289.7 247 61.9
QL02p024940 Quercus lobata HOM05D007108 ORTHO05D009128 2.7e-76 289.3 244 61.9
AL1G34450 Arabidopsis lyrata HOM05D007108 ORTHO05D009128 3.6e-76 288.9 245 60.8
MD05G1017900 Malus domestica HOM05D007108 ORTHO05D009128 4.7e-76 288.5 198 71.2
TPR.G18750 Trifolium pratense HOM05D007108 ORTHO05D009128 4.7e-76 288.5 196 72.4
Hma1.2p1_0107F.1_g051540 Hydrangea macrophylla HOM05D007108 ORTHO05D009128 8.0e-76 287.7 202 70.8
ECA232G2155 Erigeron canadensis HOM05D007108 ORTHO05D009128 1.0e-75 287.3 226 63.7
Medtr3g090490 Medicago truncatula HOM05D007108 ORTHO05D009128 1.0e-75 287.3 255 59.6
Sp1g18900 Schrenkiella parvula HOM05D007108 ORTHO05D009128 1.0e-75 287.3 199 70.4
Oeu000778.2 Olea europaea HOM05D007108 ORTHO05D009128 2.3e-75 286.2 278 56.5
Haze_17721 Corylus avellana HOM05D007108 ORTHO05D009128 3.0e-75 285.8 199 70.4
HanXRQChr16g0500661 Helianthus annuus HOM05D007108 ORTHO05D009128 5.7e-74 281.6 229 62.9
Lsat_1_v5_gn_9_77661 Lactuca sativa HOM05D007108 ORTHO05D009128 5.7e-74 281.6 202 66.8
COL.COLO4_06005 Corchorus olitorius HOM05D007108 ORTHO05D009128 4.8e-73 278.5 198 71.7
Cpa.g.sc49.50 Carica papaya HOM05D007108 ORTHO05D009128 1.2e-71 273.9 251 60.6
Os07g0260300 Oryza sativa ssp. japonica HOM05D007108 ORTHO05D009128 2.0e-71 273.1 197 67.0
C05p20230 Brassica napus HOM05D007108 ORTHO05D009128 7.7e-71 271.2 202 67.3
Nitab4.5_0000299g0220 Nicotiana tabacum HOM05D007108 ORTHO05D009128 2.5e-69 266.2 257 56.8
arahy.Tifrunner.gnm1.ann1.3M80B2 Arachis hypogaea HOM05D007108 ORTHO05D009128 5.5e-69 265.0 235 61.3
SEGI_12340 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 1.4e-67 260.4 198 63.6
arahy.Tifrunner.gnm1.ann1.QUZ9E8 Arachis hypogaea HOM05D007108 ORTHO05D009128 3.4e-66 255.8 263 55.1
ATR1136G010 Amborella trichopoda HOM05D007108 ORTHO05D009128 4.4e-66 255.4 185 67.6
FAN20G1168 Fragaria x ananassa HOM05D007108 ORTHO05D009128 9.1e-64 247.7 202 63.4
SGA_v2.0_scaffold24G10368 Striga asiatica HOM05D007108 ORTHO05D009128 1.2e-63 247.3 190 65.8
Pp3c20_22500 Physcomitrium patens HOM05D007108 ORTHO05D009128 1.0e-62 244.2 195 61.0
SEGI_05187 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 2.9e-62 242.7 156 71.2
CBR_g41654 Chara braunii HOM05D007108 ORTHO05D009128 8.5e-62 241.1 216 55.6
SMO228G0194 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 9.4e-61 237.7 152 74.3
Pp3c23_490 Physcomitrium patens HOM05D007108 ORTHO05D009128 8.0e-60 234.6 156 66.7
Actinidia01141 Actinidia chinensis HOM05D007108 ORTHO05D009128 1.8e-59 233.4 203 61.6
Psat5g082320 Pisum sativum HOM05D007108 ORTHO05D009128 2.3e-59 233.0 168 67.9
CiPaw.16G016700 Carya illinoinensis HOM05D007108 ORTHO05D009128 2.6e-58 229.6 200 59.0
AagrBONN_evm.TU.Sc2ySwM_117.292 Anthoceros agrestis HOM05D007108 ORTHO05D009128 1.1e-56 224.2 187 58.3
unitig_26.g9907 Utricularia gibba HOM05D007108 ORTHO05D009128 1.4e-56 223.8 186 60.8
Sabra02G0055700 Salix brachista HOM05D007108 ORTHO05D009128 2.9e-54 216.1 171 66.1
Nitab4.5_0000427g0030 Nicotiana tabacum HOM05D007108 ORTHO05D009128 1.9e-53 213.4 141 73.8
MELO3C024103.2 Cucumis melo HOM05D007108 ORTHO05D009128 4.1e-48 195.7 185 58.4
Lj7A366T74 Lonicera japonica HOM05D007108 ORTHO05D009128 2.5e-45 186.4 204 51.5
PSO384G3614 Papaver somniferum HOM05D007108 ORTHO05D009128 7.3e-45 184.9 187 55.6
SMO347G0599 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 2.1e-44 183.3 159 56.0
SMO228G0031 Selaginella moellendorffii HOM05D007108 ORTHO05D009128 4.4e-42 175.6 153 53.6
Cre17.g715500 Chlamydomonas reinhardtii HOM05D007108 ORTHO05D009128 1.4e-40 170.6 209 43.5
FAN24G1879 Fragaria x ananassa HOM05D007108 ORTHO05D009128 2.4e-40 169.9 211 48.8
FAN15G3050 Fragaria x ananassa HOM05D007108 ORTHO05D009128 1.6e-39 167.2 215 48.8
HanXRQChr03g0063741 Helianthus annuus HOM05D007108 ORTHO05D009128 3.4e-34 149.4 93 73.1
Zm00001eb097150 Zea mays HOM05D007108 ORTHO05D009128 3.5e-31 139.4 123 56.9
SEGI_19863 Sequoiadendron giganteum HOM05D007108 ORTHO05D009128 4.4e-26 122.5 72 79.2
Psat2g167120 Pisum sativum HOM05D007108 ORTHO05D003402 1.1e-24 117.9 75 76.0
Ca_16660_v3 Cicer arietinum L. HOM05D006773 ORTHO05D008775 2.3e-14 83.6 187 36.9
Psat7g065200 Pisum sativum HOM05D007108 ORTHO05D009128 1.5e-10 70.9 91 44.0


User provided reference genes

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