Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026761 Chenopodium quinoa HOM05D001186 ORTHO05D000971 5.3e-38 160.6 86 100.0
EL10Ac1g01490 Beta vulgaris HOM05D001186 ORTHO05D000971 1.7e-20 102.4 85 71.8
AUR62013512 Chenopodium quinoa HOM05D001186 ORTHO05D000971 1.1e-19 99.8 72 81.9
Lj4P850T14 Lonicera japonica HOM05D001186 ORTHO05D000971 3.5e-13 78.2 74 60.8
Aqoxy6G00387 Aquilegia oxysepala HOM05D001186 ORTHO05D000971 4.5e-13 77.8 72 63.9
Nitab4.5_0000633g0120 Nicotiana tabacum HOM05D001186 ORTHO05D000971 5.9e-13 77.4 72 62.5
Nitab4.5_0006679g0010 Nicotiana tabacum HOM05D001186 ORTHO05D000971 7.7e-13 77.0 72 62.5
CAN.G1664.1 Capsicum annuum HOM05D001186 ORTHO05D000971 1.3e-12 76.3 72 63.9
Nitab4.5_0000299g0270 Nicotiana tabacum HOM05D001186 ORTHO05D000971 5.0e-12 74.3 71 60.6
Nitab4.5_0000427g0090 Nicotiana tabacum HOM05D001186 ORTHO05D000971 5.0e-12 74.3 71 62.0
Potri.005G189300 Populus trichocarpa HOM05D001186 ORTHO05D000971 5.0e-12 74.3 72 63.9
Sc20g0003400 Simmondsia chinensis HOM05D001186 ORTHO05D000971 6.6e-12 73.9 72 68.1
Nn1g06171 Nelumbo nucifera HOM05D001186 ORTHO05D000971 1.1e-11 73.2 72 62.5
Gohir.A02G108503 Gossypium hirsutum HOM05D001186 ORTHO05D000971 1.5e-11 72.8 72 63.9
Gohir.D03G070700 Gossypium hirsutum HOM05D001186 ORTHO05D000971 1.5e-11 72.8 72 63.9
Gorai.003G089500 Gossypium raimondii HOM05D001186 ORTHO05D000971 1.5e-11 72.8 72 63.9
MBI17_g11165_MAGBIO Magnolia biondii HOM05D001186 ORTHO05D000971 1.5e-11 72.8 72 61.1
TAR579G0002 Trochodendron aralioides HOM05D001186 ORTHO05D000971 1.5e-11 72.8 72 58.3
Lsat_1_v5_gn_1_8801 Lactuca sativa HOM05D001186 ORTHO05D000971 1.9e-11 72.4 84 52.4
PGSC0003DMG400017564 Solanum tuberosum HOM05D001186 ORTHO05D000971 1.9e-11 72.4 76 61.8
FAN27G1120 Fragaria x ananassa HOM05D001186 ORTHO05D000971 2.5e-11 72.0 74 62.2
Manes.02G176600 Manihot esculenta HOM05D001186 ORTHO05D000971 2.5e-11 72.0 72 63.9
Oeu024887.1 Olea europaea HOM05D001186 ORTHO05D000971 2.5e-11 72.0 67 68.7
PSO675G0766 Papaver somniferum HOM05D001186 ORTHO05D000971 3.3e-11 71.6 72 58.3
Sabra05G0144600 Salix brachista HOM05D001186 ORTHO05D000971 4.2e-11 71.2 84 54.8
SalBow7G3795 Salvia bowleyana HOM05D001186 ORTHO05D000971 4.2e-11 71.2 84 56.0
Haze_17728 Corylus avellana HOM05D001186 ORTHO05D000971 5.5e-11 70.9 62 66.1
Potri.002G070600 Populus trichocarpa HOM05D001186 ORTHO05D000971 5.5e-11 70.9 72 61.1
Sabra02G0055300 Salix brachista HOM05D001186 ORTHO05D000971 5.5e-11 70.9 72 61.1
Actinidia15150 Actinidia chinensis HOM05D001186 ORTHO05D000971 7.2e-11 70.5 72 59.7
CiPaw.16G016300 Carya illinoinensis HOM05D001186 ORTHO05D000971 7.2e-11 70.5 70 61.4
Cc03_g13430 Coffea canephora HOM05D001186 ORTHO05D000971 7.2e-11 70.5 77 58.4
COL.COLO4_36019 Corchorus olitorius HOM05D001186 ORTHO05D000971 7.2e-11 70.5 72 61.1
Glyma.04G239400 Glycine max HOM05D001186 ORTHO05D000971 7.2e-11 70.5 64 62.5
Glyma.06G124400 Glycine max HOM05D001186 ORTHO05D000971 7.2e-11 70.5 64 62.5
Oeu051260.1 Olea europaea HOM05D001186 ORTHO05D000971 7.2e-11 70.5 84 54.8
MSTRG.2669 Avicennia marina HOM05D001186 ORTHO05D000971 9.5e-11 70.1 69 60.9
CSS0034671 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 9.5e-11 70.1 72 62.5
Cfa018343 Carpinus fangiana HOM05D001186 ORTHO05D000971 9.5e-11 70.1 62 62.9
FvH4_2g14340 Fragaria vesca HOM05D001186 ORTHO05D000971 9.5e-11 70.1 74 60.8
FAN15G3153 Fragaria x ananassa HOM05D001186 ORTHO05D000971 9.5e-11 70.1 74 60.8
FAN24G3322 Fragaria x ananassa HOM05D001186 ORTHO05D000971 9.5e-11 70.1 74 60.8
Thecc.08G146900 Theobroma cacao HOM05D001186 ORTHO05D000971 9.5e-11 70.1 72 62.5
Cc07_g17900 Coffea canephora HOM05D001186 ORTHO05D000971 1.2e-10 69.7 79 57.0
FAN20G2326 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.2e-10 69.7 74 59.5
ATR0772G190 Amborella trichopoda HOM05D001186 ORTHO05D000971 1.6e-10 69.3 73 58.9
Oeu032976.1 Olea europaea HOM05D001186 ORTHO05D000971 1.6e-10 69.3 84 56.0
Eucgr.F02723 Eucalyptus grandis HOM05D001186 ORTHO05D000971 2.8e-10 68.6 68 58.8
Lsat_1_v5_gn_9_40280 Lactuca sativa HOM05D001186 ORTHO05D000971 2.8e-10 68.6 85 55.3
Lj1g0004766 Lotus japonicus HOM05D001186 ORTHO05D000971 2.8e-10 68.6 68 58.8
TWI60G0870 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 2.8e-10 68.6 72 61.1
Duzib093G1352 Durio zibethinus HOM05D001186 ORTHO05D000971 3.6e-10 68.2 72 59.7
Manes.18G089366 Manihot esculenta HOM05D001186 ORTHO05D000971 3.6e-10 68.2 72 62.5
Medtr3g090350 Medicago truncatula HOM05D001186 ORTHO05D000971 3.6e-10 68.2 69 58.0
Peaxi162Scf00051g00055 Petunia axillaris HOM05D001186 ORTHO05D000971 3.6e-10 68.2 72 56.9
TAR381G0526 Trochodendron aralioides HOM05D001186 ORTHO05D000971 3.6e-10 68.2 72 58.3
Dinv11325 Davidia involucrata HOM05D001186 ORTHO05D000971 4.7e-10 67.8 83 51.8
Duzib041G0538 Durio zibethinus HOM05D001186 ORTHO05D000971 4.7e-10 67.8 72 61.1
Hma1.2p1_0006F.1_g004610 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 4.7e-10 67.8 81 55.6
Phvul.008G159700 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 4.7e-10 67.8 72 55.6
Glyma.13G039800 Glycine max HOM05D001186 ORTHO05D000971 6.1e-10 67.4 73 56.2
Oeu037616.1 Olea europaea HOM05D001186 ORTHO05D000971 8.0e-10 67.0 72 59.7
Duzib116G0881 Durio zibethinus HOM05D001186 ORTHO05D000971 1.0e-09 66.6 63 63.5
PSO541G5231 Papaver somniferum HOM05D001186 ORTHO05D000971 1.0e-09 66.6 72 62.5
Psat5g080400 Pisum sativum HOM05D001186 ORTHO05D000971 1.0e-09 66.6 69 62.3
CANSAT25G0717 Cannabis sativa HOM05D001186 ORTHO05D000971 1.4e-09 66.2 72 65.3
TPR.G18777 Trifolium pratense HOM05D001186 ORTHO05D000971 1.4e-09 66.2 69 63.8
QL02p024757 Quercus lobata HOM05D001186 ORTHO05D000971 1.8e-09 65.9 70 52.9
CSS0038492 Camellia sinensis var. sinensis HOM05D001186 ORTHO05D000971 2.3e-09 65.5 70 52.9
HanXRQChr02g0037451 Helianthus annuus HOM05D001186 ORTHO05D000971 2.3e-09 65.5 84 50.0
Lalb_Chr11g0066501 Lupinus albus HOM05D001186 ORTHO05D000971 2.3e-09 65.5 72 54.2
RcHm_v2.0_Chr6g0276681 Rosa chinensis HOM05D001186 ORTHO05D000971 2.3e-09 65.5 73 54.8
A06p17360 Brassica napus HOM05D001626 ORTHO05D001563 3.0e-09 65.1 65 61.5
BraA06t24833Z Brassica rapa HOM05D001626 ORTHO05D001563 3.0e-09 65.1 65 61.5
Peaxi162Scf00263g00083 Petunia axillaris HOM05D001186 ORTHO05D000971 3.0e-09 65.1 72 56.9
SGA_v2.0_scaffold48G17954 Striga asiatica HOM05D001186 ORTHO05D000971 3.0e-09 65.1 84 58.3
Nn5g28668 Nelumbo nucifera HOM05D001186 ORTHO05D000971 4.0e-09 64.7 72 55.6
Oeu014479.1 Olea europaea HOM05D001186 ORTHO05D000971 5.2e-09 64.3 84 52.4
Solyc06g060470.1 Solanum lycopersicum HOM05D001186 ORTHO05D000971 5.2e-09 64.3 74 59.5
Dinv24322 Davidia involucrata HOM05D001186 ORTHO05D000971 6.8e-09 63.9 71 54.9
Glyma.14G124800 Glycine max HOM05D001186 ORTHO05D000971 6.8e-09 63.9 72 56.9
Phvul.009G136500 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 6.8e-09 63.9 64 57.8
Prupe.8G022500 Prunus persica HOM05D001186 ORTHO05D000971 6.8e-09 63.9 69 55.1
TAR628G0442 Trochodendron aralioides HOM05D001186 ORTHO05D000971 6.8e-09 63.9 72 56.9
BcaB07g32119 Brassica carinata HOM05D001186 ORTHO05D000971 8.9e-09 63.5 69 58.0
Migut.C01025 Erythranthe guttata HOM05D001186 ORTHO05D000971 8.9e-09 63.5 84 56.0
Nitab4.5_0002121g0030 Nicotiana tabacum HOM05D001186 ORTHO05D000971 1.2e-08 63.2 70 55.7
Phvul.009G148500 Phaseolus vulgaris HOM05D001186 ORTHO05D000971 1.2e-08 63.2 75 54.7
TPR.G33348 Trifolium pratense HOM05D000033 ORTHO05D001999 1.5e-08 62.8 77 50.6
unitig_899.g14702 Utricularia gibba HOM05D001186 ORTHO05D000971 1.5e-08 62.8 70 52.9
SGA_v2.0_scaffold250G45000 Striga asiatica HOM05D001186 ORTHO05D000971 2.0e-08 62.4 65 56.9
TAR376G0474 Trochodendron aralioides HOM05D001186 ORTHO05D000971 2.0e-08 62.4 72 54.2
VMungo1309G1275 Vigna mungo HOM05D001186 ORTHO05D000971 2.0e-08 62.4 64 56.2
THA.LOC104812050 Tarenaya hassleriana HOM05D001186 ORTHO05D000971 2.6e-08 62.0 73 57.5
Duzib264G1003 Durio zibethinus HOM05D001186 ORTHO05D000971 3.4e-08 61.6 73 53.4
PGR042G2791 Punica granatum HOM05D001186 ORTHO05D000971 3.4e-08 61.6 72 55.6
Sopen06g020590 Solanum pennellii HOM05D001186 ORTHO05D000971 3.4e-08 61.6 72 58.3
TWI34G0256 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 3.4e-08 61.6 58 67.2
HPP92_016162 Vanilla planifolia HOM05D001186 ORTHO05D000971 3.4e-08 61.6 71 57.7
HPP92_026215 Vanilla planifolia HOM05D001186 ORTHO05D000971 3.4e-08 61.6 71 57.7
arahy.Tifrunner.gnm1.ann1.XR04TG Arachis hypogaea HOM05D001186 ORTHO05D000971 4.4e-08 61.2 74 59.5
Dinv25835 Davidia involucrata HOM05D001186 ORTHO05D000971 4.4e-08 61.2 68 64.7
Sopen04g026910 Solanum pennellii HOM05D001186 ORTHO05D000971 5.7e-08 60.8 72 59.7
Thhalv10008673m.g Eutrema salsugineum HOM05D001186 ORTHO05D000971 7.5e-08 60.5 62 54.8
Rhsim08G0003200 Rhododendron simsii HOM05D001186 ORTHO05D000971 7.5e-08 60.5 81 50.6
Atru.chr13.2242 Acer truncatum HOM05D001186 ORTHO05D000971 9.8e-08 60.1 72 61.1
Ah.05g167620 Amaranthus hybridus HOM05D001186 ORTHO05D000971 9.8e-08 60.1 74 59.5
A07p15190 Brassica napus HOM05D001186 ORTHO05D000971 9.8e-08 60.1 70 58.6
BraA07t29260Z Brassica rapa HOM05D001626 ORTHO05D001563 9.8e-08 60.1 70 58.6
BcaC05g26036 Brassica carinata HOM05D001186 ORTHO05D000971 1.3e-07 59.7 65 58.5
C05p20190 Brassica napus HOM05D001626 ORTHO05D001563 1.3e-07 59.7 65 58.5
BolC5t30713H Brassica oleracea HOM05D001626 ORTHO05D001563 1.3e-07 59.7 65 58.5
Hma1.2p1_0483F.1_g162740 Hydrangea macrophylla HOM05D001186 ORTHO05D000971 1.3e-07 59.7 74 60.8
Lj4g0024168 Lotus japonicus HOM05D001186 ORTHO05D000971 1.3e-07 59.7 77 55.8
BcaC01g03684 Brassica carinata HOM05D001186 ORTHO05D000971 1.7e-07 59.3 69 49.3
C03p49650 Brassica napus HOM05D001186 ORTHO05D000971 1.7e-07 59.3 69 49.3
BolC3t17262H Brassica oleracea HOM05D001186 ORTHO05D000971 1.7e-07 59.3 69 49.3
Glyma.06G151400 Glycine max HOM05D001186 ORTHO05D000971 2.2e-07 58.9 75 52.0
PGSC0003DMG400000771 Solanum tuberosum HOM05D001186 ORTHO05D000971 2.2e-07 58.9 72 58.3
BcaB03g14273 Brassica carinata HOM05D001186 ORTHO05D000971 2.8e-07 58.5 69 56.5
Sp3g16760 Schrenkiella parvula HOM05D001186 ORTHO05D000971 2.8e-07 58.5 69 49.3
MD10G1018000 Malus domestica HOM05D001186 ORTHO05D000971 3.7e-07 58.2 69 60.9
VMungo1309G2779 Vigna mungo HOM05D001186 ORTHO05D000971 3.7e-07 58.2 75 52.0
BcaC06g34871 Brassica carinata HOM05D001186 ORTHO05D000971 4.9e-07 57.8 68 57.4
A03p40770 Brassica napus HOM05D001186 ORTHO05D000971 4.9e-07 57.8 69 47.8
C07p22310 Brassica napus HOM05D001186 ORTHO05D000971 4.9e-07 57.8 68 57.4
BolC7t42762H Brassica oleracea HOM05D001626 ORTHO05D001563 4.9e-07 57.8 68 57.4
BraA03t13235Z Brassica rapa HOM05D001186 ORTHO05D000971 4.9e-07 57.8 69 47.8
DCAR_014416 Daucus carota HOM05D001186 ORTHO05D000971 4.9e-07 57.8 70 57.1
CiPaw.04G086200 Carya illinoinensis HOM05D001186 ORTHO05D000971 6.3e-07 57.4 78 51.3
Ciclev10002106m.g Citrus clementina HOM05D001186 ORTHO05D000971 6.3e-07 57.4 74 58.1
Glyma.08G147600 Glycine max HOM05D001186 ORTHO05D000971 6.3e-07 57.4 84 47.6
Solyc11g005720.1 Solanum lycopersicum HOM05D001186 ORTHO05D000971 6.3e-07 57.4 69 50.7
Sopen11g001680 Solanum pennellii HOM05D001186 ORTHO05D000971 6.3e-07 57.4 69 50.7
AT1G21326 Arabidopsis thaliana HOM05D001186 ORTHO05D000971 8.3e-07 57.0 68 57.4
DCAR_014417 Daucus carota HOM05D001186 ORTHO05D000971 8.3e-07 57.0 68 57.4
ECA194G0008 Erigeron canadensis HOM05D001186 ORTHO05D000971 8.3e-07 57.0 79 54.4
Glyma.04G214700 Glycine max HOM05D001186 ORTHO05D000971 8.3e-07 57.0 75 52.0
MD05G1018300 Malus domestica HOM05D001186 ORTHO05D000971 8.3e-07 57.0 69 59.4
HPP92_011922 Vanilla planifolia HOM05D001186 ORTHO05D000971 8.3e-07 57.0 74 51.4
FAN23G1856 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.1e-06 56.6 74 52.7
FAN28G0084 Fragaria x ananassa HOM05D001186 ORTHO05D000971 1.1e-06 56.6 74 52.7
A05p30930 Brassica napus HOM05D001186 ORTHO05D000971 1.4e-06 56.2 71 47.9
BraA05t21935Z Brassica rapa HOM05D001186 ORTHO05D000971 1.4e-06 56.2 71 47.9
CAN.G62.47 Capsicum annuum HOM05D001186 ORTHO05D000971 1.4e-06 56.2 71 56.3
Glyma.05G190000 Glycine max HOM05D001186 ORTHO05D000971 1.4e-06 56.2 79 57.0
PGSC0003DMG400028672 Solanum tuberosum HOM05D001186 ORTHO05D000971 1.4e-06 56.2 69 49.3
EL10Ac6g15268 Beta vulgaris HOM05D001186 ORTHO05D000971 1.8e-06 55.8 71 46.5
Carub.0001s2072 Capsella rubella HOM05D001186 ORTHO05D000971 1.8e-06 55.8 68 58.8
Cc10_g14190 Coffea canephora HOM05D001186 ORTHO05D000971 1.8e-06 55.8 84 52.4
HanXRQChr04g0109411 Helianthus annuus HOM05D001186 ORTHO05D000971 1.8e-06 55.8 87 49.4
HPP92_000062 Vanilla planifolia HOM05D001186 ORTHO05D000971 1.8e-06 55.8 86 47.7
BcaB06g25920 Brassica carinata HOM05D001186 ORTHO05D000971 2.4e-06 55.5 70 45.7
Medtr1g028910 Medicago truncatula HOM05D001186 ORTHO05D000971 2.4e-06 55.5 70 50.0
Medtr8g093335 Medicago truncatula HOM05D001186 ORTHO05D000971 2.4e-06 55.5 83 49.4
Medtr8g093390 Medicago truncatula HOM05D001186 ORTHO05D000971 2.4e-06 55.5 83 49.4
Zm00001eb259970 Zea mays HOM05D001186 ORTHO05D000971 2.4e-06 55.5 61 57.4
FAN26G1531 Fragaria x ananassa HOM05D001186 ORTHO05D000971 3.1e-06 55.1 74 51.4
Gorai.011G116000 Gossypium raimondii HOM05D001186 ORTHO05D000971 3.1e-06 55.1 60 50.0
Lalb_Chr13g0296541 Lupinus albus HOM05D001186 ORTHO05D000971 3.1e-06 55.1 68 55.9
QL06p029571 Quercus lobata HOM05D001186 ORTHO05D000971 4.1e-06 54.7 63 61.9
RcHm_v2.0_Chr2g0120181 Rosa chinensis HOM05D001186 ORTHO05D000971 4.1e-06 54.7 74 52.7
CARHR021710 Cardamine hirsuta HOM05D001186 ORTHO05D000971 7.0e-06 53.9 68 57.4
CARHR094070 Cardamine hirsuta HOM05D001186 ORTHO05D000971 7.0e-06 53.9 70 48.6
AL1G34420 Arabidopsis lyrata HOM05D001186 ORTHO05D000971 9.2e-06 53.5 67 55.2
BcaC09g48824 Brassica carinata HOM05D001186 ORTHO05D000971 9.2e-06 53.5 79 45.6
A01p35790 Brassica napus HOM05D001186 ORTHO05D000971 9.2e-06 53.5 79 45.6
C01p45550 Brassica napus HOM05D001186 ORTHO05D000971 9.2e-06 53.5 79 45.6
BolC1t04518H Brassica oleracea HOM05D001186 ORTHO05D000971 9.2e-06 53.5 79 45.6
Ca_28450_v3 Cicer arietinum L. HOM05D001186 ORTHO05D000971 9.2e-06 53.5 77 54.5
Gohir.A10G083607 Gossypium hirsutum HOM05D001186 ORTHO05D000971 9.2e-06 53.5 60 48.3
Oeu046011.1 Olea europaea HOM05D001186 ORTHO05D000971 9.2e-06 53.5 73 56.2
PGR119G0869 Punica granatum HOM05D001186 ORTHO05D000971 9.2e-06 53.5 68 52.9
TWI79G1231 Tripterygium wilfordii HOM05D001186 ORTHO05D000971 9.2e-06 53.5 73 46.6
Zm00001eb083470 Zea mays HOM05D001186 ORTHO05D000971 9.2e-06 53.5 74 51.4


User provided reference genes

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