Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026684 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.3e-35 151.0 105 100.0
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 6.4e-11 71.2 98 55.1
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 4.1e-10 68.6 83 67.5
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 5.4e-10 68.2 51 60.8
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 5.4e-10 68.2 98 59.2
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 5.4e-10 68.2 98 59.2
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 7.0e-10 67.8 48 60.4
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 1.2e-09 67.0 47 63.8
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 1.2e-09 67.0 47 63.8
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.2e-09 67.0 87 55.2
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.0e-09 66.2 47 61.7
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.0e-09 66.2 47 61.7
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 2.0e-09 66.2 85 63.5
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 2.0e-09 66.2 87 43.7
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.7e-09 65.9 80 53.8
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 2.7e-09 65.9 96 64.6
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.7e-09 65.9 85 62.4
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 3.5e-09 65.5 60 53.3
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 4.6e-09 65.1 87 56.3
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 6.0e-09 64.7 87 62.1
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 6.0e-09 64.7 89 60.7
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 7.8e-09 64.3 99 58.6
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 7.8e-09 64.3 97 47.4
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 7.8e-09 64.3 98 59.2
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.7e-08 63.2 47 57.4
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.3e-08 62.8 87 52.9
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 3.0e-08 62.4 58 53.4
Sc26g0002500 Simmondsia chinensis HOM05D002879 ORTHO05D002930 3.0e-08 62.4 84 61.9
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 5.0e-08 61.6 55 54.5
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 8.6e-08 60.8 76 38.2
Sc26g0003520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 8.6e-08 60.8 82 63.4
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 8.6e-08 60.8 96 57.3
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 8.6e-08 60.8 47 57.4
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 8.6e-08 60.8 47 55.3
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 1.5e-07 60.1 89 43.8
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.9e-07 59.7 87 57.5
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 1.9e-07 59.7 89 50.6
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 3.3e-07 58.9 89 60.7
TWI34G0242 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 3.3e-07 58.9 40 62.5
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.3e-07 58.9 46 58.7
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 4.3e-07 58.5 48 58.3
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 5.6e-07 58.2 51 47.1
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 5.6e-07 58.2 51 49.0
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 9.5e-07 57.4 48 58.3
SEGI_40905 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 9.5e-07 57.4 43 60.5
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 9.5e-07 57.4 46 54.3
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.2e-06 57.0 57 47.4
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 1.6e-06 56.6 48 54.2
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 1.6e-06 56.6 48 58.3
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 1.6e-06 56.6 56 50.0
AUR62040594 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.6e-06 56.6 50 56.0
SEGI_09931 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 1.6e-06 56.6 60 46.7
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.1e-06 56.2 60 48.3
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 2.1e-06 56.2 86 60.5
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 2.1e-06 56.2 89 59.6
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 2.1e-06 56.2 47 51.1
Medtr1g098680 Medicago truncatula HOM05D002879 ORTHO05D002930 2.1e-06 56.2 87 56.3
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 2.1e-06 56.2 88 61.4
SEGI_08871 Sequoiadendron giganteum HOM05D002879 ORTHO05D002930 2.1e-06 56.2 51 52.9
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 2.1e-06 56.2 96 56.2
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.8e-06 55.8 46 56.5
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 2.8e-06 55.8 60 45.0
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.8e-06 55.8 42 61.9
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.8e-06 55.8 42 61.9
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 3.6e-06 55.5 100 44.0
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.6e-06 55.5 88 54.5
vmacro12406 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.6e-06 55.5 45 57.8
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 4.7e-06 55.1 51 47.1
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 6.2e-06 54.7 60 45.0
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 6.2e-06 54.7 45 55.6
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.2e-06 54.7 44 56.8
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.2e-06 54.7 46 50.0


User provided reference genes

Program Settings