Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 9.1e-170 600.1 299 100.0
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.9e-152 541.6 296 92.9
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 4.3e-135 485.0 299 82.9
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 2.8e-134 482.3 297 82.2
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 4.7e-134 481.5 296 81.4
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 2.6e-132 475.7 296 80.1
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 7.6e-132 474.2 297 81.5
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 9.9e-132 473.8 299 80.6
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 1.3e-131 473.4 296 80.7
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 2.9e-131 472.2 301 79.1
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 2.9e-131 472.2 297 80.5
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 3.8e-131 471.9 297 79.8
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 1.9e-130 469.5 297 79.8
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 2.4e-130 469.2 302 79.8
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 3.2e-130 468.8 297 80.5
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.2e-130 468.8 281 82.2
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 2.1e-129 466.1 281 81.5
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 2.1e-129 466.1 297 80.1
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 2.1e-129 466.1 297 78.8
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 2.1e-129 466.1 297 80.5
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 3.5e-129 465.3 297 79.5
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 3.5e-129 465.3 296 80.1
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 3.5e-129 465.3 300 78.3
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 4.6e-129 464.9 296 78.0
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 6.0e-129 464.5 292 80.5
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 6.0e-129 464.5 296 78.7
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 6.0e-129 464.5 298 79.2
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 1.0e-128 463.8 296 78.7
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 1.0e-128 463.8 285 80.0
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.3e-128 463.4 296 79.1
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 1.7e-128 463.0 297 78.5
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 3.0e-128 462.2 300 78.3
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 3.9e-128 461.8 292 80.1
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 3.9e-128 461.8 297 78.8
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 6.6e-128 461.1 299 78.9
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 6.6e-128 461.1 298 79.5
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 1.5e-127 459.9 299 78.9
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 1.5e-127 459.9 294 79.3
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 3.3e-127 458.8 298 77.9
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 3.3e-127 458.8 301 77.7
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 7.3e-127 457.6 294 78.6
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 9.6e-127 457.2 285 80.4
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 1.2e-126 456.8 296 78.0
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.2e-126 456.8 289 79.6
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 2.1e-126 456.1 284 81.0
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 2.8e-126 455.7 297 77.1
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 3.6e-126 455.3 297 77.1
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 3.6e-126 455.3 296 78.0
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 3.6e-126 455.3 297 77.1
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 3.6e-126 455.3 297 76.8
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 4.7e-126 454.9 300 77.7
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 4.7e-126 454.9 298 78.2
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 4.7e-126 454.9 296 75.7
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 6.2e-126 454.5 302 77.2
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 6.2e-126 454.5 297 77.8
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 1.4e-125 453.4 347 69.5
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 5.2e-125 451.4 299 76.9
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 6.9e-125 451.1 295 77.6
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 9.0e-125 450.7 299 76.3
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 9.0e-125 450.7 299 76.6
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 2.0e-124 449.5 300 76.7
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 2.6e-124 449.1 299 75.9
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 3.4e-124 448.7 299 75.9
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 4.4e-124 448.4 297 77.4
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 5.8e-124 448.0 299 75.6
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 5.8e-124 448.0 295 75.6
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 9.9e-124 447.2 295 75.6
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 1.3e-123 446.8 299 76.3
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.3e-123 446.8 299 76.6
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.3e-123 446.8 299 76.6
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 3.8e-123 445.3 295 75.9
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 4.9e-123 444.9 299 75.6
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 4.2e-122 441.8 299 75.6
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 1.6e-121 439.9 297 77.4
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 1.7e-120 436.4 295 75.6
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 3.0e-120 435.6 288 78.8
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 2.1e-118 429.5 297 74.7
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 4.9e-115 418.3 297 71.4
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 1.9e-114 416.4 297 73.4
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 5.4e-114 414.8 287 73.9
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 3.0e-112 409.1 410 56.6
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 5.6e-111 404.8 388 58.0
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 5.6e-111 404.8 285 71.6
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 6.2e-110 401.4 299 68.2
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 8.4e-107 391.0 293 66.6
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 4.2e-106 388.7 296 67.6
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.0e-104 384.0 286 67.1
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 3.3e-103 379.0 289 67.5
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 2.4e-101 372.9 380 56.6
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.1e-98 364.0 226 81.4
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 3.0e-96 355.9 279 64.2
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 7.4e-95 351.3 225 80.0
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 2.7e-89 332.8 226 75.7
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 8.2e-86 321.2 216 77.3
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 9.4e-82 307.8 184 84.2
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 6.1e-81 305.1 212 76.4
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 6.7e-80 301.6 311 53.4
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.7e-78 297.0 295 56.9
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 7.7e-76 288.1 203 75.4
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.7e-75 287.0 203 74.9
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 7.2e-74 281.6 179 82.1
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.6e-73 280.4 206 72.8
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 6.3e-70 268.5 168 80.4
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.8e-69 266.9 168 80.4
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.8e-69 266.9 182 75.3
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.4e-69 266.5 273 49.5
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.9e-66 256.9 166 79.5
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 4.4e-63 245.7 292 49.3
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.2e-60 237.7 203 62.1
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 2.7e-60 236.5 144 79.9
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.2e-59 233.4 274 47.1
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 8.6e-51 204.9 134 74.6
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 3.3e-50 203.0 133 74.4
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.7e-44 183.3 117 82.1
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 9.8e-39 164.9 97 78.4
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 1.7e-30 137.5 80 87.5
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.2e-28 131.3 261 37.2
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 7.8e-28 128.6 89 71.9
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 7.8e-28 128.6 253 34.8
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.6e-20 104.4 103 50.5
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 1.2e-15 88.2 48 81.2
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 1.4e-08 64.7 71 52.1
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.4e-08 63.9 41 75.6


User provided reference genes

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